BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	U00096	781369 =	148 (0.700)	70 (0.330) +G	21/290	17.6	42.1%	noncoding (1/76 nt)	lysZ	tRNA‑Lys
*	?	U00096	= 2521129	46 (0.220)	70 (0.330) +G	21/290	17.6	42.1%	intergenic (+3/‑44)	valX/valY	tRNA‑Val/tRNA‑Val
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 150 total aligned reads displayed.

CAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGA  >  U00096/781221‑781516

caGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGACACGATGAAAAAGAGTTGGGGTACCAACCGTATg                                                                                                                                                     >  2:543648/1‑149 (MQ=17)

  gTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCGCGAGTAAAAATCTTTCAGGTAACACCCGTATggg                                                                                                                                                   >  2:543643/1‑149 (MQ=255)

  gTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATggg                                                                                                                                                   >  1:543617/1‑149 (MQ=255)

     ttAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGAAAGCAACGGCCCGAAGGGAGAGCGAAGCGAGACATCATGCAAGCCCCACCAAGCTTAAAGATAGGCACCCAGTAACTATGTTTCAGGTAACAACCGTTTGGGTCg                                                                                                                                                >  1:543666/1‑149 (MQ=25)

      tAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGt                                                                                                                                               >  2:543699/1‑149 (MQ=255)

       aaCATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGtt                                                                                                                                              <  2:543550/149‑1 (MQ=255)

       aaCATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGtt                                                                                                                                              <  1:543549/149‑1 (MQ=255)

       aaCATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGtt                                                                                                                                              <  1:543548/149‑1 (MQ=255)

        aCATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTATAAATCTTTCAGGTAACACCCGTATGGGTCGTTa                                                                                                                                             >  1:543602/1‑149 (MQ=255)

           tCAAACTCAGATGTTAAGCGTGAATGATAACGTTGCGGCAGCAACGGACCGTAGTGCGAGCGAAGCTAGTCATCCTGCACTACCCACCAATCTTAAAGATTGGCCCCGAGTAAATATCTTTCATGTAACACCCGTATGGGTCGTTAGCt                                                                                                                                          <  2:543552/149‑1 (MQ=255)

             aaaCTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCTAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCa                                                                                                                                        <  1:543553/149‑1 (MQ=255)

             aaaCTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCa                                                                                                                                        >  2:543601/1‑149 (MQ=255)

               aCTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAATCGAGTCATCCTGAACTACCCCCCAATCTTAAAGATTGGCCCCGAGTAAAAAACTTTCAGGTAACAACCGTATGGGTCGTTAGCt                                                                                                                                          >  1:543656/1‑145 (MQ=25)

               aCTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGt                                                                                                                                      <  1:543554/149‑1 (MQ=255)

               aCTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTAAGCTCAGt                                                                                                                                      >  2:543754/1‑149 (MQ=255)

               aCTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAATCATACTGCACGACCCACCAATCTTAAAGATTGGCCACGAGTAAAAAAATTTCAGGTAACCACCGTATGGGTCGTTAGATCAGt                                                                                                                                      >  1:543588/1‑149 (MQ=21)

                 tCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTg                                                                                                                                    >  2:543569/1‑149 (MQ=255)

                   aGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGTGTCGTTAGCTCAGTTGGt                                                                                                                                  >  2:543583/1‑149 (MQ=255)

                    gATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTa                                                                                                                                 >  2:543571/1‑149 (MQ=255)

                      tGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGt                                                                                                                                  >  1:716609/1‑146 (MQ=255)

                      tGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGt                                                                                                                                  >  2:1456181/1‑146 (MQ=255)

                      tGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTaga                                                                                                                               <  1:543559/149‑1 (MQ=255)

                      tGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGACACGAGTAAAAATCTTTCAGGTACCACCCGTATGGGTAGTTAGCGCAGTTGGt                                                                                                                                  >  2:543604/1‑146 (MQ=25)

                           aGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAg                                                                                                                           <  1:543560/148‑1 (MQ=255)

                           aGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCAGCCTGCACGCCCCCCCAAACGGAAAGATTTGACCCGAGGAAAAAGCAGTGAGGTAACGCGCGTATGGGTCGGAAGCTGAGTTGGTagcggagg                                                                                                                          >  2:543712/1‑143 (MQ=12)

                             cGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTTGCCCCGAGTAAAAAACTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGATg                                                                                                                        >  2:543742/1‑149 (MQ=255)

                              gTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGt                                                                                                                                  <  2:543563/138‑1 (MQ=255)

                               tGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGc                                                                                                                                           >  1:543592/1‑128 (MQ=255)

                                    gATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTa                                                                                                                 >  1:543613/1‑149 (MQ=255)

                                    gATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTa                                                                                                                 <  1:543564/149‑1 (MQ=255)

                                      tAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAAt                                                                                                               >  2:543773/1‑149 (MQ=255)

                                      tAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAAt                                                                                                               >  2:3025217/1‑149 (MQ=255)

                                      tAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAAt                                                                                                               <  2:543565/149‑1 (MQ=255)

                                      tAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAAt                                                                                                               >  1:543610/1‑149 (MQ=255)

                                      tAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAAt                                                                                                               >  2:543605/1‑149 (MQ=255)

                                      tAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCACGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAAt                                                                                                               >  2:543591/1‑149 (MQ=255)

                                        aCGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCa                                                                                                             >  1:543597/1‑149 (MQ=255)

                                             gcgcCAGCAACGGACCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTgg                                                                                                        <  1:2204127/149‑1 (MQ=255)

                                                    cAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGt                                                                                                                                      <  1:543568/112‑1 (MQ=255)

                                                          cccGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGaa                                                                                           <  1:543571/149‑1 (MQ=255)

                                                           ccGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCa                                                                                                                                        <  1:543572/103‑1 (MQ=255)

                                                             gTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGAGTGGCCCCGAGTAAAAATCTTTCAGGTAACACGCGTATGGGTCGTTAGCTCAGTGGGTAGAGCAGGGGACGTTTAATCGATTGGTCGCAGGTTCGGATcc                                                                                        >  2:543674/1‑149 (MQ=38)

                                                                 ggCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCa                                                                                    <  2:543573/149‑1 (MQ=255)

                                                                  gcgagcgaAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCAc                                                                                   <  2:543574/149‑1 (MQ=255)

                                                                   cgagcgaAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTTGCCCCGAGTAAAAATCTTTCAGGAAACAACCGTATGGGTCGTTAGCTAAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTAGCAGGTTCGAATCCTGCACg                                                                                  >  2:543726/1‑149 (MQ=37)

                                                                   cgagcgaAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACg                                                                                  >  1:543752/1‑149 (MQ=255)

                                                                        gaagcgaGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACcca                                                                             <  2:543578/149‑1 (MQ=255)

                                                                            cgaGTCATCCTGCACGTACCACCAATCTTATAGATTGGCACCGAGTATATATCTTTCTGTTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCa                                                                                    <  2:543581/138‑1 (MQ=21)

                                                                            cgaGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGCGCAGTTGACTTTTAATAAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCaa                                                                         >  2:543670/1‑149 (MQ=255)

                                                                             gaGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCAc                                                                                   >  1:543581/1‑138 (MQ=255)

                                                                                 cATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTaa                                                                    >  2:543679/1‑149 (MQ=255)

                                                                                      tGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGTGTCGTTAGCTCAGTTGGTAGAGCATTTGACTTTTAATCAATTGTTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAggt                                                                <  1:543583/148‑1 (MQ=255)

                                                                                      tGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAggtg                                                               >  1:543652/1‑149 (MQ=255)

                                                                                            aCCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACt                                                         >  2:543675/1‑149 (MQ=255)

                                                                                              ccaccaATCTTAAAGATCGGCCCCGAGCAAAAATCTTTCACTTAACTCCCGTCTGGGGCGTTAGCTCAGATGGTAGAGCAGTTGACTTTTACTCACGTGGGCGCAGGGTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTgg                                                       <  2:543584/149‑1 (MQ=21)

                                                                                                accaATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAAt                                                                                                           <  1:543585/95‑1 (MQ=255)

                                                                                                accaATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTATTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTa                                                     >  1:543687/1‑149 (MQ=255)

                                                                                                 ccaATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATc                                                                                                              >  2:543586/1‑91 (MQ=255)

                                                                                                 ccaATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATc                                                                                                              <  1:543586/91‑1 (MQ=255)

                                                                                                 ccaATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGGCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAg                                                                  <  1:2694023/135‑1 (MQ=255)

                                                                                                  caATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTaaa                                                                   >  1:543758/1‑133 (MQ=255)

                                                                                                   aaTCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTag                                                    >  1:543665/1‑147 (MQ=255)

                                                                                                    aTCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTg                                                                                                                                    >  2:543767/1‑66 (MQ=255)

                                                                                                     tCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGaa                                                >  1:543680/1‑149 (MQ=255)

                                                                                                      cTTAAAGATTGTCCCCGAGTAAAAATCTTTCAGGTAACACCAGTATGTGTCGTTAGCTCAGTTTGTAGAGCAGTTTACTTTTAATCAATTGTTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAAc                                               <  2:543588/149‑1 (MQ=25)

                                                                                                      cTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTAT‑TGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGTGCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACg                                              <  1:543589/149‑1 (MQ=255)

                                                                                                      cTTAAACATAGTCCACGAGTAAAATTCTTTCATGAAACACCAGTAGTGGTCGTTATCTCAGATGGTAGAGCACTTTACTTTTATTCATTCGTTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAAc                                               <  2:543602/149‑1 (MQ=18)

                                                                                                        tAAAGATTGGCCCCTAGATATAATCATTAATTCAAAACCAGATTGTTTCGTTTTCTCAGATGGTTGAGCATTTGACTTTTACTCATTTGTGCGCAGGGTGGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGt                                             <  2:543644/149‑1 (MQ=12)

                                                                                                        tAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTg                                                                                                         >  1:543595/1‑89 (MQ=255)

                                                                                                        tAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGaa                                                <  1:543591/146‑1 (MQ=255)

                                                                                                        tAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGt                                             >  1:543678/1‑149 (MQ=255)

                                                                                                        tAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGt                                             <  2:543592/149‑1 (MQ=255)

                                                                                                          aaGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGa                                           <  2:1992409/149‑1 (MQ=255)

                                                                                                          aaGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGa                                           <  1:543594/149‑1 (MQ=255)

                                                                                                               tGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGAt                                      >  2:2749355/1‑149 (MQ=255)

                                                                                                                  ccccGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAg                                                                                                                           >  2:543759/1‑61 (MQ=255)

                                                                                                                  ccccGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGGTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAAc                                   <  2:543597/149‑1 (MQ=255)

                                                                                                                   cccGAGTAAAAATCTTTCAGGTAACACCCGTATTGGTCGTTAGCTCAGTTGGTAGAGCAGGTGACTTTTAATAAATTGTTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACg                                  <  2:543598/149‑1 (MQ=255)

                                                                                                                   cccGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACg                                  <  1:543599/149‑1 (MQ=255)

                                                                                                                     cGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGtt                                >  2:543671/1‑149 (MQ=255)

                                                                                                                      gAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTgg                                                                                                        >  1:543603/1‑76 (MQ=255)

                                                                                                                      gAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTc                                                                                              >  2:543762/1‑86 (MQ=255)

                                                                                                                         tAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGa                                           <  1:543605/134‑1 (MQ=255)

                                                                                                                          aaaaaTCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGtt                           >  1:619900/1‑149 (MQ=255)

                                                                                                                           aaaaTCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCa                                                                                    >  1:543606/1‑91 (MQ=255)

                                                                                                                              aTCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTaaa                                                                   >  1:543756/1‑105 (MQ=255)

                                                                                                                                cTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAAc                     <  2:543610/149‑1 (MQ=255)

                                                                                                                                cTTTCAGGCAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGGTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAAc                     <  1:543609/149‑1 (MQ=255)

                                                                                                                                 tttCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATc                                                                                         <  2:543608/80‑1 (MQ=255)

                                                                                                                                  ttCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTc                                                                                                      >  1:543612/1‑66 (MQ=255)

                                                                                                                                     aggcttcacCCTGATGGGTCGATAGGTCAGTTCTTAGAGCAGTTGTTGTTAAATCCTTTGGTCGCTGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGccc                <  2:543661/143‑1 (MQ=18)

                                                                                                                                     aGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGt                                                                                                                          >  1:543763/1‑43 (MQ=255)

                                                                                                                                     aGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTaa                                                                                                                >  2:543775/1‑53 (MQ=255)

                                                                                                                                         aaCACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAg            <  2:543613/149‑1 (MQ=255)

                                                                                                                                           cacCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTc                                                                                              >  1:543768/1‑65 (MQ=255)

                                                                                                                                           cacCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTc                                                                                              <  2:543768/65‑1 (MQ=255)

                                                                                                                                             cccGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCa                                                                                                   <  2:543614/58‑1 (MQ=255)

                                                                                                                                                gtctGGGTCGTTAGCTCATTTGGTAGAGCAGTTGACTTTAAATCAATTGGTCGCAGGTTCTACTCCTGCACGACCCACCAATTTAAAGGTTTTTACTGTTATATACCGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCgaga     <  2:543617/146‑1 (MQ=17)

                                                                                                                                                gTATGGGTCGTTAGCTCAGTTGGTAGAGCATTTGACTTTTAATCTATTGGTCGAAGGTTCGAATCCTGCACGACCCACCAATTTAAATGTTGTTACTGGTAGATATCGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCgaga     <  2:543616/149‑1 (MQ=18)

                                                                                                                                                    gggTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGtt                                <  1:543622/118‑1 (MQ=255)

CAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGA  >  U00096/781221‑781516

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.