Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | U00096 | 422,429 | 0 | T | G | 23.3% | 264.8 / 22.7 | 129 | intergenic (+70/‑89) | proY/malZ | putative transporter ProY/maltodextrin glucosidase |
Reads supporting (aligned to +/- strand): ref base T (14/85); new base G (28/2); total (42/87) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 9.95e-16 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
Only 100 of 134 total aligned reads displayed.
CGCGTGGATTGTTGTGCTGTTGATTGGCTGGATGTTTAAACGCCGCCACGATCGTCAGCTGGCTGAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCT‑CCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTTCATCACAGGGGAATTATGATGTTAAATGCATGGCACCTGCCGGTGCCCCCATTTGTTAAACAAAGCAAAGATCAACT > U00096/422284‑422576 | cgcgTGGATTGTTGTGCTGTTGATTGGCTGGATGTTTAAACGCCGCCACGATCGTCAGCTGGCTGAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGtcct < 2:290685/149‑1 (MQ=255) cgcgTGGAGTGGGGGGCTGGTGATTGGCTGGATGTTTAAAAGCCGCCACGATCGTCAGCTGGCTGAAACCCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGtcct < 2:290695/149‑1 (MQ=255) cgTGGATTGTTGTGCTGTTGATTGGCTGGATGTTTAAACGCCGCCACGATCGTCAGCTGGCTGAAACCCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCGCCCGgcctcc > 2:290805/1‑149 (MQ=255) tGGATTGTTGTGCTGTTGATTGGCTGGATGTTTAAACGCCGCCACGATCGTCAGCTGGCTGAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCTGCTATTCCGAAAGTTAACCGCCCGCGtcgaccac > 2:290781/1‑143 (MQ=255) tGGATTGTTGTGCTGTTGATTGGCTGGATGTTTAAACGCCGCCACGATCGTCAGCTGGCTGAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGgccgcct‑c > 2:290792/1‑149 (MQ=255) gATTGTTGTGCTGTTGATTGGCTGGATGTTTAAACGCCGCCACGATCGTCAGCTGGCTGAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCT‑ccc < 1:290687/149‑1 (MQ=255) ttgtGCTGTTGATTGGCTGGATGTTTAAACGCCGCCACGATCGTCAGCTGGCTGAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCT‑CCCCCaaa < 2:290688/149‑1 (MQ=255) tgtgCTGTTGATTGGCTGGATGTTTAAACGCCGCCACGATCGTCAGCTGGCTGAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCT‑CCCCCAAat < 1:290689/149‑1 (MQ=255) tgCTGTTGATTGGCTGGATGTTTAAACGCCGCCACGATCGTCAGCTGGCTGAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCT‑CCCCCAAatat < 2:2454297/149‑1 (MQ=255) gCTGTTGATTGGCTGGATGTTTAAACGCCGCCACGATCGTCAGCTGGCTGAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCT‑CCCCCAAATATc < 1:290690/149‑1 (MQ=255) cTGTTGATTGGCTGGATGTTTAAACGCCGCCACGATCGTCAGCTGGCTGAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCT‑CCCCCAAATATcc < 2:290693/149‑1 (MQ=255) tGTTGATTGGCTGGATGTTTAAACGCCGCCACGATCGTCAGCTGGCTGAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGGGGGCCG‑CCCCCAAATATCCt > 2:290766/1‑149 (MQ=255) ttGATTGGCTGGATGTTTAAACGCCGCCACGATCGTCAGCTGGCTGAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCT‑CCCCCAAATATCCTTc < 2:290694/149‑1 (MQ=255) gATTGGCTGGATGTTTAAACGCCGCCACGATCGTCAGCTGGCTGAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCT‑CCCCCAAATATCCTTCAg < 1:290696/149‑1 (MQ=255) ttGGCTGGATGTTTAAACGCCGCCACGATCGTCAGCTGGCTGAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCT‑CCCCCAAATATCCTTCAgat < 2:290698/149‑1 (MQ=255) ggCTGGATGTTTAAACGCCGCCACGATCGTCAGCTGGCTGAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCT‑CCCCCAAATATCCTTCAgatga < 1:290699/149‑1 (MQ=255) ggCTGGATGTTTAAACGCCGCCACGATCGTCAGCTGGCTGAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCT‑CCCCCAAATATCCTTCAgatga < 2:290700/149‑1 (MQ=255) gCTGGATGTTTAAACGCCGCCACGATCGTCAGCTGGCTGAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCT‑CCCCCAAATATCCTTCAgatgat < 1:290701/149‑1 (MQ=255) gATGTTTAAACGCCGCCACGATCGTCAGCTGGCTGAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGGCCGCCG‑CCCCCCAAAAACCGTCAGAAGAagagg > 2:290754/1‑148 (MQ=255) aTGTTTAAACGCCGCCACGATCGTCAGCTGGCTGAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCT‑CCCCCAAATATCCTTCAGAtgatga < 1:290704/146‑1 (MQ=255) aTGTTTAAACGCCGCCACGATCGTCAGCTGGCTGAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCT‑CCCCCAAATATCCTTCAGATGATGAGTg < 1:290703/149‑1 (MQ=255) ttAAACTCCGCCACGATCGTCAGCTGGCTGAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGTAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGGCCTCCT‑CCCCCAAATATCCTTCAGATGATGAGTGATcc < 2:290705/149‑1 (MQ=255) tAAACGCCGCCACGATCGTCAGCTGGCTGAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCGCGCGGCGTGCT‑GCCCCCCAGATCCTTCAGATGGTGTGTGATcgg > 2:290780/1‑147 (MQ=255) aCGCCGCCACGATCGTCAGCTGGCTGAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCT‑CCCCCAAATATCCTTCAGATGATGAGTGATCCTGCa < 1:290707/149‑1 (MQ=255) cgccgcCACGATCGTCAGCTGGCTGAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCT‑CCCCCAAATATCCTTCAGATGATGAGTGATCCTGCAt < 2:290708/149‑1 (MQ=255) gccgccACGATCGTCAGCTGGCTGAAACCCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGGCCTCCT‑CCCCCCAATATACGTAAGCTGAGGAGtgctgctgcctg > 2:290832/1‑146 (MQ=255) ccgccACGATCTTCTTCTGGCTGTAAAGAAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAATTCCTGTTCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCT‑CCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTa < 2:290710/149‑1 (MQ=255) ccgccACGATCGTCAGCTGGCTGAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCT‑CCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTa < 2:290709/149‑1 (MQ=255) cgccACGATCGTCAGCTGGCTGAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCT‑CCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAg < 2:290712/149‑1 (MQ=255) aCGATCGTCAGCTGGCTGAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGGCCCCGGCCGCCG‑CGCCCCCATATCCGTCAGATGAGGGGTGCTGCTGCATTggggga > 2:290824/1‑146 (MQ=255) aCGATCGTCAGCTGGCTGAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCT‑CCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTa < 2:290714/149‑1 (MQ=255) cGATCGTCAGCTGGCTGAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCT‑CCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTAt < 1:290715/149‑1 (MQ=255) gATCGTCAGCTGGCTGAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGGCCTCCT‑CCCCCAAATATCCTTCAGATGATGAGGGATCCTGCATTAGGCTATg < 2:290716/149‑1 (MQ=255) cGTCAGCTGGCTGAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCT‑CCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCa < 2:290718/149‑1 (MQ=255) gTCAGCTGGCTGAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCT‑CCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCaa < 2:694666/149‑1 (MQ=255) tCAGCTGGCTGAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCT‑CCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAg < 1:290719/149‑1 (MQ=255) cAGCTGGCTGAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCT‑CCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAgg < 1:290720/149‑1 (MQ=255) gctggctgAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCT‑CCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTg < 1:290722/149‑1 (MQ=255) gctggctgAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCGCCG‑CCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATGAGGCTAGGGCAAgggg > 1:290791/1‑147 (MQ=255) gctggctgAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGGCCGCCT‑CCCCCCAATATCCTTCAGATGATGAGTGATGCTGCAGTAGGCTATGGGAAgggg > 1:290809/1‑147 (MQ=255) ggctaaaaCCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCT‑CCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCa < 1:290723/145‑1 (MQ=255) tgAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCGCCCGGCCGCCG‑CCCCCAAAGAGCCTGCACATGATGAGTGATCCTGCATTAGGGTAAGGGAAGGTGATc > 2:1743935/1‑146 (MQ=255) gAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGGGGCCGGCGTCGTGCCGCCAAGTA‑AGTACAGATGATGAGTGATCCTGGAGTATGCTATGGCAAGGTggta > 2:290826/1‑142 (MQ=255) gAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCGCCT‑CCCCCAAATATCCTTCAGATGATGAGGGATGCTGCATTAGGCTATGGGAAGGTGATc > 2:290796/1‑145 (MQ=255) gAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCACCCGTCCTCCT‑CCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGAt < 2:290724/149‑1 (MQ=255) aaaaCCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCT‑CCCCCAAATATCCTTCAGATGATGAGTg < 1:290725/115‑1 (MQ=255) aCCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGGCCTCCG‑CCCCCAAAAATACTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTtc > 2:290810/1‑149 (MQ=255) cAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCGCGGCCGCCG‑CCCCCGAAGATCCAGCAGAGGATGAGTGATGCTGGAGTAGGCTATGGCAAGGTGGTCAGATTTtcat > 2:290778/1‑149 (MQ=255) cAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGGCCGCCG‑CCCCCAAAAATCCTTCAGATGATGAGTGATCCGGCAGTAGGCTATGGCAAGGTGATCAGATTTtcat > 2:290827/1‑149 (MQ=255) gTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGGCCGCCG‑CGCCCAAAAATCCTTCAGATGATGAGTGATCCTGCATTAGGCGAGGGGAAGGGGATAAGATTTtgatca > 2:290790/1‑149 (MQ=255) tactCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCT‑CCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTTCATcac < 1:290727/146‑1 (MQ=255) ctacTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCT‑CCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTTCATCACAg < 2:1327593/146‑1 (MQ=255) ccTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCT‑CCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTTCATCACAggg < 1:290729/149‑1 (MQ=255) cTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCT‑CCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTTCATCACAgggg < 2:290730/149‑1 (MQ=255) ttGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGGCCGCCT‑CCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATGAGATTTTCATCACAGGGGa > 2:290833/1‑149 (MQ=255) tGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCT‑CCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTTCATCACAGGGGaa < 2:290731/149‑1 (MQ=255) tGCGTTCTGTAAGCCGGGTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCT‑CCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTTCATCACAGGGGaa < 2:290732/149‑1 (MQ=255) gCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGGCCTCCT‑CCCCCCCAAAGCCTGAAGATGATGAGTGATCCTGGAGTAGGCGATGGGAAGGTGAGCGGATTTTCATGACAGTGGaag > 2:290844/1‑148 (MQ=255) ttCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCGGCCT‑CCCCCAAAAAACAATCAGATGATTACTGGTCCTGCATTAGGGGATGGGAAGGTGGTCAGATTTTCTTAACAGGGGAttttt > 2:290838/1‑147 (MQ=255) tCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCT‑CCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTTCATCACAGGGGAAtt < 1:290733/146‑1 (MQ=255) gTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCT‑CCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTTCATCACAGGGGAATTatgatg < 2:290736/149‑1 (MQ=255) gTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCAGTCCTCCT‑CCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTTCATCACAGGGGAATTatgatg < 2:290735/149‑1 (MQ=255) aaGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCT‑CCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTTCATCACAGGGGAATTATGATGtt < 2:290737/149‑1 (MQ=255) ccGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCT‑CCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTTCATCACAGGGGAATTATGATGTTaaa < 2:290740/149‑1 (MQ=255) ccGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCT‑CCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTTCATCACAGGGGAATTATGATGTTaaa < 2:290739/149‑1 (MQ=255) gTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCT‑CCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTTCATCACAGGGGAATTATGATGTTAAATGc < 2:290741/149‑1 (MQ=255) ttCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCGCCGGCGGCGT‑CCCCCAAAGAACCGTCCGAGGATGAGTGAGCCTGGATTAGGCTATGGGAAGGTGAGCAGATTTTCATCACAGGGGAATGATGATGTTATATGCa > 2:290859/1‑149 (MQ=255) tCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCT‑CCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTTCATCACAGGGGAATTATGATGTTAAATGCAt < 1:290743/149‑1 (MQ=255) cAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCT‑CCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTTCATCACAGGGGAATTATGATGTTAAATGCATg < 2:290745/149‑1 (MQ=255) cAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCT‑CCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTTCATCACAGGGGAATTATGATGTTAAATGCATg < 1:290746/149‑1 (MQ=255) ggaggaAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCT‑CCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTTCATCACAGGGGAATTATGATGTTAAATGCATGGc < 2:290747/149‑1 (MQ=255) ggaggaAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGGCCGCCG‑CCCCCAAATATGCGTCAGATGATGAGGGTTCCTGGAGTAGGGGATGGCAAGGTGGTCAGATTTTGATGACAGGGGGATTATGATGTTTTATGAATGGc > 2:290854/1‑149 (MQ=255) gaggaAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCT‑CCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTTCATCACAGGGGAATTATGATGTTAAATGCATGGCa < 2:290748/149‑1 (MQ=255) aggaAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCT‑CCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTTCATCACAGGGGAATTATGATGTTAAATGCATGGCAc < 2:290750/149‑1 (MQ=255) aggaAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCT‑CCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTTCATCACAGGGGAATTATGATGTTAAATGCATGGCAc < 1:290749/149‑1 (MQ=255) aaaTCCTGATCCGGCTATTCCGAAAGTTATCCGCGCCCGGGCTCCT‑CCCCCCAAAATCATTCGGCGGATGAGTGATCATGGATTAGGCGATTGGAAGGTGATATGATTTTCATGAAAGGGGTATTATTATGTTTAATGAATTGCACATg > 2:290799/1‑149 (MQ=255) aaTCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCT‑CCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTTCATCACAGGGGAATTATGATGTTAAATGCATGGCACCTGc < 2:290751/149‑1 (MQ=255) aaTCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCT‑CCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTTCATCACAGGGGAATTATGATGTTAAATGCATGGCACCTGc < 2:290752/149‑1 (MQ=255) cTATTCCGAAAGTTATCCGCCCCCGTCCTCCT‑CCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTTCATCACAGGGGAATTATGATGTTAAATGCATGGCACCTGCCGGTGCCCCCAtt < 2:290756/149‑1 (MQ=255) tATTCCGAAAGTTATCCGCCCCCGTCCTCCT‑CCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGTCTATGGCAAGGTGATCAGATTTTCATCACAGGGGAATTATGATGTTAAATGCATGGCACCTGCCGGTGCCCCCAttt < 2:290757/149‑1 (MQ=255) tATTCCGAAAGTTATCCGCCCCCGTCCTCCT‑CCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTTCATCACAGGGGAATTATGATGTTAAATGCATGGCACCTGCCGGTGCCCCCa < 1:290759/146‑1 (MQ=255) aTTCCGAAAGTTATCCGCCGCCGGCCTCCT‑CCCCCAAAAATCATTAAGATGATGAGTGATACTGCATTAGGCTATGGCAAGGTGATAAGATTTTAATAAAAGGGGAATTATGATGTTAAATTAATGGAACCTGCCGGTGCCCCCaaatg > 2:290816/1‑145 (MQ=255) ccGAAAGTTATCCGCCCCCGTCCTCCT‑CCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTTCATCACAGGGGAATTatga < 1:290760/110‑1 (MQ=255) gAAAGTTATCCGCCCCCGGCCGCCG‑CCCCCAAATAACCTTCAGATGATGAGTGATGCTGCATTAGGGTATGGCAAGGTGATAAGATTTTGATCACAGGGGAATTATTATGTTTAATGCATGGCACCTGCCGGGGGCCCCCTATGTTaaa > 2:290864/1‑149 (MQ=255) aaGTTATCCGCCCCCGTCCTCCT‑CCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTTCATCACAGGGGAATTATGATGTTAAATGCATGGCACCTGCCGGTGCCCCCATTTGTTAAAca < 2:290761/149‑1 (MQ=255) ttATCCGCCCCCGTCCTCCT‑CCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTTCATCACAGGGGAATTATGATGTTAAATGCATGGCACCTGCCGGTGCCCCCATTTGTTAAAcaaag < 2:290763/149‑1 (MQ=255) ttATCCGCCCCCGTCCTCCT‑CCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGGGATCAGAGTTTCATCACAGGGGAATTATGATGTGAAATGCATGGCACCTGCCGGTGCCCCCATTTGTTAAAcaaag < 2:290762/149‑1 (MQ=255) tATCCGCCCCCGTCCTCCT‑CCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTTCATCACAGGGGAATTATGATGTTAAATGCATGGCACCTGCCGGTGCCCCCATTTGTTAAAcaaagc < 1:290764/149‑1 (MQ=255) ggtgcGCCCCCGTCCTCCG‑CCCCCACATATCCGTGAGATGCTGAGTGATCCTGCGTTAGGCTAGGGCAAGGTGATCAGCTTTTAGTCACAGGGGAAGTATGATTTTAAATGCATGGCCCCTGCCGGTGCCCCCATTTGTTAAAcaaagc > 1:290891/5‑149 (MQ=255) aTCCGCCCCCGTCCTCCT‑CCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTTCATCACAGGGGAATTATGATGTTAAATGCATGGCACCTGCCGGTGCCCCCATTTGTTAAAcaaagca < 1:290766/149‑1 (MQ=255) tCCGCCCCCGTCCTCCT‑CCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTTCATCACAGGGGAATTATGATGTTAAATGCATGGCACCTGCCGGTGCCCCCATTTGTTAAAcaaagcaa < 2:290767/149‑1 (MQ=255) cGCCCCCGTCCTCCT‑CCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTTCATCACAGGGGAATTATGATGTTAAATGCATGGCACCTGCCGGTGCCCCCATTTGTTAAAcaaagcaaag < 1:290768/149‑1 (MQ=255) cccccGTCCTCCT‑CCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTTCATCACAGGGGAATTATGATGTTAAATGCATGGCACCTGCCGGTGCCCCCATTTGTTAAACAAAGCAAAGa < 1:290769/148‑1 (MQ=255) ccccGTCCTCCT‑CCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTTCATCACAGGGGAATTATGATGTTAAATGCATGGCACCTGCCGGTGCCCCCATTTGTTAAAcaaagcaa > 2:290815/1‑144 (MQ=255) ccccGTCCTCCT‑CCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTTCATCACAGGGGAATTATGATGTTAAATGCAAGGCACCTGCCGGTGCCCCCATTTGTTAAACAAAGCAAAGATc > 2:290841/1‑149 (MQ=255) ccGTCCTCCT‑CCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTTCATCACAGGGGAATTATGATGTTAAATGCATGGCACCTGCCGGTGCCCCCATTTGTTAAACAAAGCAAAGATCaa > 1:290830/1‑149 (MQ=255) ccGTCCTCCT‑CCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTTCATCACAGGGGAATTATGATGTTAAATGCATGGCACCTGCCGGTGCCCCCATTTGTTAAACAAAGCAAAGATCaa > 2:290846/1‑149 (MQ=255) ccGTCCTCCT‑CCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTTCATCACAGGGGAATTATGATGTTAAATGCATGGCACCTGCCGGTGCCCCCATTTGTTAAACAAAGCAAAGATCaa > 2:290894/1‑149 (MQ=255) gTCCTCCT‑CCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTTCATCACAGGGGAATTATGATGTTAAATGCATGGCACCTGCCGGTGCCCCCATTTGTTAAACAAAGCAAAGATCAACt > 2:290800/1‑149 (MQ=255) gTCCTCCT‑CCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTTCATCACAGGGGAATTATGATGTTAAATGCATGGCACCTGCCGGTGCCCCCATTTGTTAAACAAAGCAAAGATCAACt < 2:290771/149‑1 (MQ=255) | CGCGTGGATTGTTGTGCTGTTGATTGGCTGGATGTTTAAACGCCGCCACGATCGTCAGCTGGCTGAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCT‑CCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTTCATCACAGGGGAATTATGATGTTAAATGCATGGCACCTGCCGGTGCCCCCATTTGTTAAACAAAGCAAAGATCAACT > U00096/422284‑422576 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |