New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AP012306	= 1906320	321 (1.020)	8 (0.030)	8/292	15.0	2.5%	coding (692/1689 nt)	yfaA	predicted protein
	?	AP012306	= 1906331	321 (1.040)					coding (681/1689 nt)	yfaA	predicted protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TACGCCAGCAAAAGAAGGCATTAACCGCTGGTAGCCAAACCCCAGCCACCTGGCGCTGACTACGATGCGCTGGCGTACTGGCGTTTTTTCGGCAGTACGCTCTTCCAGGCCAAAGCTTGCTTGCCAGCGTTTTTTGCCGCTCAACAAATCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AP012306/1906169‑1906320 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacGGCGATCGCAGGTGATTTGTTGAGCGGCAAAAAACGCTGGCAAGCAAGCTTTGGCCTGGAAGAGCGTACTGCCGAAAAAACGCCAGTACGCCAGCGCATCGTAGTCAGCGCCAGGTGGCTGGGGTTTGGCTACCAGCGGTTAATGCCTT  <  AP012306/1906331‑1906183                                                                                                                                                                                                                                                                                                               TACGCCAGCAAAAGAAGGCATTAACCGCTGGTAGCCAAACCCCAGCCACCTGGCGCTGACTACGATGCGCTGGCGTACTGGCGTTTTTTCGGCAGTACGCTCTTCCAGGCCAAAGCTTGCTTGCCAGCGTTTTTTGCCGCTCAACAAATC                                                                                                                                                         >  1:343364/1‑150  ACGCCAGCAAAAGAAGGCATTAACCGCTGGTAGCCAAACCCCAGCCACCTGGCGCTGACTACGATGCGCTGGCGTACTGGCGTTTTTTCGGCAGTACGCTCTTCCAGGCCAAAGCTTGCTTGCCAGCGTTTTTTGCCGCTCAACAAATCA                                                                                                                                                        >  1:1887972/1‑150  ACGCCAGCAAAAGAAGGCATTAACCGCTGGTAGCCAAACCCCAGCCACCTGGCGCTGACTACGATGCGCTGGCGTACTGGCGTTTTTTCGGCAGTACGCTCTTCCAGGCCAAAGCTTGCTTGCCAGCGTTTTTTGCCGCTCAACAAATCA                                                                                                                                                        >  1:2746108/1‑150                                                                                                   GCTCTTCCAGGCCAAAGCTTGCTTGCCAGCGTTTTTTGCCGCGCAACAAATCACGGCGATCGGAGGGGATTTGGTGAGCGGCAAAAAACGATGGGAAGCAAGGTTTGGCCTGGAAGAGGGGACTGCCGAAAAAAGGCCAGTAAGGCAGgg                                                       >  2:2977280/1‑148                                                                                                      CTTCCAGGCCAAAGCTTGCTTGCCAGCGTTTTTTGCCGCTCAACAAATCACGGCGATCGCAGGTGATTTGTTGAGCGGCAAAAAACGCTGGCAAGCAAGCTTTGGCCTGGAAGAGCGTACTGCCGAAAAAACGCCAGTACGCCAGCGCAT                                                    <  1:2977280/150‑1                                                                                                       TTCCAGGCCAAAGCTTGCTTGCCAGCGTTTTTTGCCGCTCAACAAATCACGGCGATCGCAGGTGATTTGTTGAGCGGCAAAAAACGCTGGCAAGCAAGCTTTGGCCTGGAAGAGCGTACTGCCGAAAAAACGCCAGTACGCCAGCGCATC                                                   >  2:2550570/1‑150                                                                                                                            CCAGCGTTTTTTGCCGCTCAACAAATCACGGCGATCGCAGGTGATTTGTTGAGCGGCAAAAAACGCTGGCAAGCAAGCTTTGGCCTGGAAGAGCGTACTGCCGAAAAAACGCCA                                                                  <  1:3061647/114‑1                                                                                                                            CCAGCGTTTTTTGCCGCTCAACAAATCACGGCGATCGCAGGTGATTTGTTGAGCGGCAAAAAACGCTGGCAAGCAAGCTTTGGCCTGGAAGAGCGTACTGCCGAAAAAACGCCA                                                                  >  2:3061647/1‑114                                                                                                                                          CGCTCAACAAATCACGGCGATCGCAGGTGATTTGTTGAGCGGCAAAAAACGCTGGCAAGCAAGCTTTGGCCTGGAAGAGCGTACTGCCGAAAAAACGCCAGTACGCCAGCGCATCGTAGTCAGCGCCAGGTGGCTGGGGTTTGGCTACCA                <  1:2550570/150‑1                                                                                                                                             TCAACAAATCACGGCGATCGCAGGTGATTTGTTGAGCGGCAAAAAACGCTGGCAAGCAAGCTTTGGCCTGGAAGAGCGTACTGCCGAAAAAACGCCAGTACGCCAGCGCATCGTA                                                <  1:599837/115‑1                                                                                                                                             TCAACAAATCACGGCGATCGCAGGTGATTTGTTGAGCGGCAAAAAACGCTGGCAAGCAAGCTTTGGCCTGGAAGAGCGTACTGCCGAAAAAACGCCAGTACGCCAGCGCATCGTA                                                >  2:599837/1‑115                                                                                                                                                      CACGGCGATCGCAGGTGATTTGTTGAGCGGCAAAAAACGCTGGCAAGCAAGCTTTGGCCTGGAAGAGCGTACTGCCGAAAAAACGCCAGTACGCCAGCGCATCGTAGTCAGCGCCAGGTGGCTGGGGTTTGGCTACCAGCGGTTAATGCC    >  2:4007854/1‑150                                                                                                                                                      CACGGCGATCGCAGGTGATTTGTTGAGCGGCAAAAAACGCTGGCAAGCAAGCTTTGGCCTGGAAGAGCGTACTGCCGAAAAAACGCCAGTACGCCAGCGCATCGTAGTCAGCGCCAGGTGGCTGGGGTTTGGCTACCAGCGGTTAATGCC    >  2:518384/1‑150                                                                                                                                                       ACGGCGATCGCAGGTGATTTGTTGAGCGGCAAAAAACGCTGGCAAGCAAGCTTTGGCCTGGAAGAGCGTACTGCCGAAAAAACGCCAGTACGCCAGCGCATCGTAGTCAGCGCCAGGTGGCTGGGGTTTGGCTACCAGCGGTTAATGCCT   <  1:3957462/150‑1                                                                                                                                                        CGGCGATCGCAGGTGATTTGTTGAGCGGCAAAAAACGCTGGCAAGCAAGCTTTGGCCTGGAAGAGCGTACTGCCGAAAAAACGCCAGTACGCCAGCGCATCGTAGTCAGCGCCAGGTGGCTGGGGTTTGGCTACCAGCGGTTAATGCCTT  <  2:1355766/150‑1                                                                                                                                                                                                                                                                                                               TACGCCAGCAAAAGAAGGCATTAACCGCTGGTAGCCAAACCCCAGCCACCTGGCGCTGACTACGATGCGCTGGCGTACTGGCGTTTTTTCGGCAGTACGCTCTTCCAGGCCAAAGCTTGCTTGCCAGCGTTTTTTGCCGCTCAACAAATCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AP012306/1906169‑1906320 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacGGCGATCGCAGGTGATTTGTTGAGCGGCAAAAAACGCTGGCAAGCAAGCTTTGGCCTGGAAGAGCGTACTGCCGAAAAAACGCCAGTACGCCAGCGCATCGTAGTCAGCGCCAGGTGGCTGGGGTTTGGCTACCAGCGGTTAATGCCTT  <  AP012306/1906331‑1906183

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.