| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP012306 | 2166807 = | 266 (0.850) | 7 (0.020) | 7/294 | 15.4 | 2.6% | intergenic (‑308/‑17) | upp/purM | uracil phosphoribosyltransferase/phosphoribosylaminoimidazole synthetase |
| ? | AP012306 | 2166823 = | 258 (0.830) | intergenic (‑324/‑1) | upp/purM | uracil phosphoribosyltransferase/phosphoribosylaminoimidazole synthetase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
AAGCCGCCCAGACCGCCCATCACTTCCGGACGACGCGTTTTCTTCACTACGCCTTTGATTCTTCCAACCAGAGCATTACCCGCGTCAATATCAACACCGGCATCTTTGTAGCTAAGAGAGGTTTTATCGGTCACTGCTTGGGTCCCCACGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP012306/2166957‑2166807‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcAGTGACCGATAAAACCTCTCTTAGCTACAAAGATGCCGGTGTTGATATTGACGCGGGTAATGCTCTGGTTGGAAGAATCAAAGGCGTAGTGAAGAAAACGCGTCGTCCGGAAGTGATGGGCGGTCTGGGCGGCTTCGGTGCGCTGTGTG > AP012306/2166823‑2166971 AAGCCGCCCAGACCGCCCATCACTTCCGGACGACGCGTTTTCTTCACTACGCCTTTGATTCTTCCAACCAGAGCATTACCCGCGTCAATATCAACACCGGCATCTTTGTAGCTAAGAGAGGTTTTATCGGTCACTGCTTGGGTCCCCACG < 1:3671919/150‑1AAGCCGCCCAGACCGCCCATCACTTCCGGACGACGCGTTTTCTTCACTACGCCTTTGATTCTTCCAACCAGAGCATTACCCGCGTCAATATCAACACCGGCATCTTTGTAGCTAAGAGAGGTTTTATCGGTCACTGCTTGGGTCCCCACG > 2:115536/1‑150AAGCCGCCCAGACCGCCCATCACTTCCGGACGACGCGTTTTCTTCACTACGCCTTTGATTCTTCCAACCAGAGCATTACCCGCGTCAATATCAACACCGGCATCTTTGTAGCTAAGAGAGGTTTTATCGGTCACTGCTTGGGTCCCCACG > 2:1905954/1‑150 AGCCGCCCAGACCGCCCATCACTTCCGGACGACGCGTTTTCTTCACTACGCCTTTGATTCTTCCAACCAGAGCATTACCCGCGTCAATATCAACACCGGCATCTTTGTAGCTAAGAGAGGTTTTATCGGTCACTGCTTGGGTCCCCACGC > 2:2079747/1‑150 CCATCACTTCCGGACGACGCGTTTTCTTCACTACGCCTTTGATTCTTCCAACCAGAGCATTACCCGCGTCAATATCAACACCGGCATCTTTGTAGCTAAGAGAGGTTTTATCGGTCACTGCTTGGGTCCCCACGCAGTGACCGATAAAAC > 1:1264161/1‑150 TCACTTCCGGACGACGCGTTTTCTTCACTACGCCTTTGATTCTTCCAACCAGAGCATTACCCGCGTCAATATCAACACCGGCATCTTTGTAGCTAAGAGAGGTTTTATCGGTCACTGCTTGGGTCCCCACGC‑GTGACCGATAAAACCTCT < 2:3390075/150‑1 ACGCGTTTTCTTCACTACGCCTTTGATTCTTCCAACCAGAGCATTACCCGCGTCAATATCAACACCGGCATCTTTGTAGCTAAGAGAGGTTTTATCGGTCACTGCTTGGGTCCCCACGCAGTGACCGATAAAAC > 1:3485875/1‑134 ACGCGTTTTCTTCACTACGCCTTTGATTCTTCCAACCAGAGCATTACCCGCGTCAATATCAACACCGGCATCTTTGTAGCTAAGAGAGGTTTTATCGGTCACTGCTTGGGTCCCCACGCAGTGACCGATAAAAC < 2:3485875/134‑1 CGCCTTTGATTCTTCCAACCAGAGCATTACCCGCGTCAATATCAACACCGGCATCTTTGTAGCTAAGAGAGGTTTTATCGGTCACTGCTTGGGTCCCCACGCAGTGACCGATAAAACCTCTCTTAGCTACAAAGATGCCGGTGTTGATAT < 2:1264161/150‑1 TTCTTCCAACCAGAGCATTACCCGCGTCAATATCAACACCGGCATCTTTGTAGCTAAGAGAGGTTTTATCGGTCACTGCTTGGGTCCCCACGCAGTGACCGATAAAACCTCTCTTAGCTACAAAGATGCCGGTGTTGATATTGACGCGGG < 2:4207132/150‑1 TCAACACCGGCATCTTTGTAGCTAAGAGAGGTTTTATCGGTCACTGCTTGGGTCCCCACGCAGTGACCGATAAAACCTCTCTTAGCTACAAAGATGCCGGTGTTGATATTGACGCGGGTAATGCTCTGGTTGGAAGAATCAAAGGCGTAG < 2:999784/150‑1 GCAGTGACCGATAAAACCTCTCTTAGCTACAAAGATGCCGGTGTTGATATTGACGCGGGTAATGCTCTGGTTGGAAGAATCAAAGGCGTAGTGAAGAAAACGCGTCGTCCGGAAGTGATGGGCGGTCTGGGCGGCTTCGGTGCGCTGTGT < 2:2001268/150‑1 CAGTGACCGATAAAACCTCTCTTAGCTACAAAGATGCCGGTGTTGATATTGACGCGGGTAATGCTCTGGTTGGAAGAATCAAAGGCGTAGTGAAGAAAACGCGTCGTCCGGAAGTGATGGGCGGTCTGGGCGGCTTCGGTGCGCTGTGTG < 2:3014698/150‑1 AAGCCGCCCAGACCGCCCATCACTTCCGGACGACGCGTTTTCTTCACTACGCCTTTGATTCTTCCAACCAGAGCATTACCCGCGTCAATATCAACACCGGCATCTTTGTAGCTAAGAGAGGTTTTATCGGTCACTGCTTGGGTCCCCACGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP012306/2166957‑2166807‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcAGTGACCGATAAAACCTCTCTTAGCTACAAAGATGCCGGTGTTGATATTGACGCGGGTAATGCTCTGGTTGGAAGAATCAAAGGCGTAGTGAAGAAAACGCGTCGTCCGGAAGTGATGGGCGGTCTGGGCGGCTTCGGTGCGCTGTGTG > AP012306/2166823‑2166971 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |