| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP012306 | = 2684153 | 354 (1.160) | 8 (0.030) | 8/288 | 11.5 | 2.3% | coding (40/216 nt) | rpsU | 30S ribosomal subunit protein S21 |
| ? | AP012306 | = 2684161 | 344 (1.170) | coding (48/216 nt) | rpsU | 30S ribosomal subunit protein S21 | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
AAAGGCCGCGGTGCTTTACAAAGCAGCAGCAATTGCAGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP012306/2684000‑2684153‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgacgCAGAGCTACGTCGAACGGCTCGTTTTCACGTACTTTAATTACCGGCATGTGCCTCTCACCTTTGATTAATTCGGTTTGCCGCTGGCATCAACGCCAGCTTATTTCAAAATGGTGCGGAATTTTACTGCAATTGCTGCTGCTTTGTAAAG < AP012306/2684161‑2684013 AAAGGCCGCGGTGCTTTACAAAGCAGCAGCAATTGCAGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTC > 2:3242887/1‑150 AAGGCCGCGGTGCTTTACAAAGCAGCAGCAATTGCAGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCG > 2:3305060/1‑150 AAGGCCGCGGTGCTTTACAAAGCAGCAGCAATTGCAGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCG > 1:669037/1‑150 AGGCCGCGGTGCTTTACAAAGCAGCAGCAATTGCAGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGA > 1:2578955/1‑150 AGGCCGCGGTGCTTTACAAAGCAGCAGCAATTGCAGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGA > 1:862554/1‑150 AGGCCGCGGTGCTTTACAAAGCAGCAGCAATTGCAGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGA < 1:3821326/150‑1 GGCCGCGGTGCTTTACAAAGCAGCAGCAATTGCAGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGAC < 2:3385748/150‑1 GGCCGCGGTGCTTTACAAAGCAGCAGCAATTGCAGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGAC < 1:1963276/150‑1 GGCCGCGGTGCTTTACAAAGCAGCAGCAATTGCAGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGAC > 1:301724/1‑150 GGCCGCGGTGCTTTACAAAGCAGCAGCAATTGCAGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGAC > 2:178173/1‑150 GGCCGCGGTGCTTTACAAAGCAGCAGCAATTGCAGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGAC > 1:3785369/1‑150 GCCGCGGTGCTTTACAAAGCAGCAGCAATTGCAGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACG > 2:2494910/1‑150 GCCGCGGTGCTTTACAAAGCAGCAGCAATTGCAGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACG < 1:3741239/150‑1 GCCGCGGTGCTTTACAAAGCAGCAGCAATTGCAGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACG < 1:262686/150‑1 CGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGCAGAGCTACGTCGAACGGCTCGTTTTCACGTACTTTAATTACCGGCATGTGCCTCTCACCTTTta > 2:1031814/1‑148 CAAACCGAATTAATCAAAGGTGAGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGCAGAGCTACGTCGAACGGCTCGTTTTCACGTACTTTAATTACCGGCATGTGCCTCTCACCCTTGATTTATTCGGTTTTCC > 2:1788393/1‑150 AGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGCAGAGCTACGTCGAACGGCTCGTTTTCACGTACTTTAATTACCGGCATGTGCCTCTCACCTTTGATTAATTCGGTTTGCCGCTGGCATCAACGCCAGCTTAT > 2:535123/1‑150 GGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGCAGAGCTACGTCGAACGGCTCGTTTTCACGTACTTTAATTACCGGCATGTGCCTCTCACCTTTGATTAATTCGGTTTGCCGCTGGCATCA < 1:3122590/135‑1 GGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGCAGAGCTACGTCGAACGGCTCGTTTTCACGTACTTTAATTACCGGCATGTGCCTCTCACCTTTGATTAATTCGGTTTGCCGCTGGCATCA > 2:3122590/1‑135 TTAAAGTACGTGAAAACGAGCCGTTCGACGCAGAGCTACGTCGAACGGCTCGTTTTCACGTACTTTAATTACCGGCATGTGCCTCTCACCTTTGATTAATTCGGTTTGCCGCTGGCATCAACGCCAGCTTATTTCAAAATGGTGCGGAAT < 1:535123/150‑1 AAAACGAGCCGTTCGACGCAGAGCTACGTCGAACGGCTCGTTTTCACGTACTTTAATTACCGGCATGTGCCTCTCACCTTTGATTAATTCGGTTTGCCGCTGGCATCAACGCCAGCTTA < 1:3470434/119‑1 AAAACGAGCCGTTCGACGCAGAGCTACGTCGAACGGCTCGTTTTCACGTACTTTAATTACCGGCATGTGCCTCTCACCTTTGATTAATTCGGTTTGCCGCTGGCATCAACGCCAGCTTA > 2:3470434/1‑119 cgtCGCAGAGCTACGTCGAACGGCTCGTTTTCACGTACTTTAATTACCGGCATGTGCCTCTCACCTTTGATTAATTCGGTTTGCCGCTGGCATCAACGCCAGCTTATTTCAAAATGGTGCGGAATTTTACTGCAATTGCTGCTGCTTTGT < 2:3802925/147‑1 CGACGCAGAGCTACGTCGAACGGCTCGTTTTCACGTACTTTAATTACCGGCATGTGCCTCTCACCTTTGATTAATTCGGTTTGCCGCTGGCATCAACGCCAGCTTATTTCAAAATGGTGCGGAATTTTACTGCAATTGCTGCTGCTTTGT > 1:111955/1‑150 GACGCAGAGCTACGTCGAACGGCTCGTTTTCACGTACTTTAATTACCGGCATGTGCCTCTCACCTTTGATTAATTCGGTTTGCCGCTGGCATCAACGCCAGCTTATTTCAAAATGGTGCGGAATTTTACTGCAATTGCTGCTGCTTTGTA < 2:3119399/150‑1 GACGCAGAGCTACGTCGAACGGCTCGTTTTCACGTACTTTAATTACCGGCATGTGCCTCTCACCTTTGATTAATTCGGTTTGCCGCTGGCATCAACGCCAGCTTATTTCAAAATGGTGCGGAATTTTACTGCAATTGCTGCTGCTTTGTA < 2:3791472/150‑1 ACGCAGAGCTACGTCGAACGGCTCGTTTTCACGTACTTTAATTACCGGCATGTGCCTCTCACCTTTGATTAATTCGGTTTGCCGCTGGCATCAACGCCAGCTTATTTCAAAATGGTGCGGAATTTTACTGCAATTGCTGCTGCTTTGTAA > 1:2317224/1‑150 CGCAGAGCTACGTCGAACGGCTCGTTTTCACGTACTTTAATTACCGGCATGTGCCTCTCACCTTTGATTAATTCGGTTTGCCGCTGGCATCAACGCCAGCTTATTTCAAAATGGTGCGGAATTTTACTGCAATTGCTGCTGCTTTGTAAA < 2:3011032/150‑1 CGCAGAGCTACGTCGAACGGCTCGTTTTCACGTACTTTAATTACCGGCATGTGCCTCTCACCTTTGATTAATTCGGTTTGCCGCTGGCATCAACGCCAGCTTATTTCAAAATGGTGCGGAATTTTACTGCAATTGCTGCTGCTTTGTAAA < 1:2244386/150‑1 GCAGAGCTACGTCGAACGGCTCGTTTTCACGTACTTTAATTACCGGCATGTGCCTCTCACCTTTGATTAATTCGGTTTGCCGCTGGCATCAACGCCAGCTTATTTCCAAATGGTGCGGCATTTTACTGCAATTGCTGCTGCTTTGTAAAG > 1:1361872/1‑150 AAAGGCCGCGGTGCTTTACAAAGCAGCAGCAATTGCAGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP012306/2684000‑2684153‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgacgCAGAGCTACGTCGAACGGCTCGTTTTCACGTACTTTAATTACCGGCATGTGCCTCTCACCTTTGATTAATTCGGTTTGCCGCTGGCATCAACGCCAGCTTATTTCAAAATGGTGCGGAATTTTACTGCAATTGCTGCTGCTTTGTAAAG < AP012306/2684161‑2684013 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |