| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP012306 | = 3853073 | 171 (0.550) | 4 (0.010) | 4/282 | 8.6 | 2.4% | coding (272/687 nt) | ulaF | L‑ribulose 5‑phosphate 4‑epimerase |
| ? | AP012306 | = 3853093 | 166 (0.560) | coding (292/687 nt) | ulaF | L‑ribulose 5‑phosphate 4‑epimerase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TGATCAAGCCCAGCGGCGTTGCCTACGAAACCATGAAAGCGGCCGATATGGTGGTGGTTGATATGAGCGGCAAGGTGGTGGAAGGGGAGTATCGCCCATCTTCCGACACTGCGACGCATCTCGAACTCTACCGTCGTTACCCGTCGCTTGGTGGCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP012306/3852917‑3853073‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtggcatGAGTGGAGTGGGTATGGACAATGCCACCAAGCGACGGGTAACGACGGTAGAGTTCGAGATGCGTCGCAGTGTCGGAAGATGGGCGATACTCCCCTTCCACCACCTTGCCGCTCATATCAACCACCACCATATCGGCCGCTTTCATGGTT < AP012306/3853093‑3852945 TGATCAAGCCCAGCGGCGTTGCCTACGAAACCATGAAAGCGGCCGATATGGTGGTGGTTGATATGAGCGGCAAGGTGGTGGAAGGGGAGTATCGCCCATCTTCCGACACTGCGACGCATCTCGAACTCTACCGTCGTTACCCGTCGCTTG > 2:763212/1‑150TGATCAAGCCCAGCGGCGTTGCCTACGAAACCATGAAAGCGGCCGATATGGTGGTGGTTGATATGAGCGGCAAGGTGGTGGAAGGGGAGTATCGCCCATCTTCCGACACTGCGACGCATCTCGAACTCTACCGTCGTTACCCGTCGCTTG < 2:4085498/150‑1 ATCAAGCCCAGCGGCGTTGCCTACGAAACCATGAAAGCGGCCGATATGGTGGTGGTTGATATGAGCGGCAAGGTGGTGGAAGGGGAGTATCGCCCATCTTCCGACACTGCGACGCATCTCGAACTCTACCGTCGTTACCCGTCGCTTGGT < 2:3946286/150‑1 ATCAAGCCCAGCGGCGTTGCCTACGAAACCATGAAAGCGGCCGATATGGTGGGGGTTGATATGAGCGGCAAGGCGGTGGAAGGGGAGGATCGCCCATCTTCCGACACGGCGACGCATCTCGAACTCTACCGTCGTTACCCGTCGCTTGGT > 2:2839849/1‑150 CAAGCCCAGCGGCGTTGCCTACGAAACCATGAAAGCGGCCGATATGGTGGTGGTTTATATGAGCGGCAAGGTGGTGGAAGGGGAGTATCGCCCATCTTCCGACACTGCGACGCATCTCGAACTCTACCGTCGTTACCCGTCGCTTGGTGG < 1:3969849/150‑1 CAAGCCCAGCGGCGTTGCCTACGAAACCATGAAAGCGGCCGATATGGTGGTGGTTGATATGAGCGGCAAGGTGGTGGAAGGGGAGTATCGCCCATCTTCCGACACTGCGACGCATCTCGAACTCTACCGTCGTTACCCGTCGCTTGGTGG > 1:4229078/1‑150 AAGCCCAGCGGCGTTGCCTACGAAACCATGAAAGCGGCCGATATGGTGGTGGTTGATATGAGCGGCAAGGTGGTGGAAGGGGAGTATCGCCCATCTTCCGACACTGCGACGCATCTCGAACTCTACCGTCGTTACCCGTCGCTTGGTGGC < 1:3163729/150‑1 AAGCCCAGCGGCGTTGCCTACGAAACCATGAAAGCGGCCGATATGGTGGTGGTTGATATGAGCGGCAAGGTGGTGGAAGGGGAGTATCGCCCATCTTCCGACACTGCGACGCATCTCGAACTCTACCGTCGTTACCCGTCGCTTGGTGGC > 2:2445712/1‑150 AAGCCCAGCGGCGTTGCCTACGAAACCATGAAAGCGGCCGATATGGTGGTGGTTGATATGAGCGGCAAGGTGGTGGAAGGGGAGGATCGCCCATCTTCCGACACTGCGACGCATCTCGAACTCTACCGTCGTTACCCGTCGCTTGGTGGC > 2:2727449/1‑150 GCCCAGCGGCGTTGCCTACGAAACCATGAAAGCGGCCGATATGGTGGGGGTTGATATGAGCGGCAAGGTGGTGGAAGGGGAGTATCGCCCATCTTCCGACACTGCGACGCATCTCGAACTCTACCGTCGTTACCCGTCGCTTGGTGGCAT > 1:198294/1‑150 TGAGCGGCAAGGTGGTGGAAGGGGAGTATCGCCCATCTTCCGACACTGCGACGCATCTCGAACTCTACCGTCGTTACCCGTCGCTTGGTGGCATGAGTGGAGTGGGTATGGACAATGCCACCAAGCGACGGGTAACGACGGTAGAGTTCG > 2:1862104/1‑150 CGACGCATCTCGAACTCTACCGTCGTTACCCGTCGCTCGGTGGCATGAGTGGAGTGGGTATGGACAATGCCACCAAGCGACGGGTAACGACGGTAGAGTTCGAGATGCGTCGCAGTGTCGGAAGATGGGCGATACTCCCCTTCCACCACC > 2:601860/1‑150 CTCGAACTCTACCGTCGTTACCCGTCGCTTGGTGGCATGAGTGGAGTGGGTATGGACAATGCCAC < 2:2360465/65‑1 CTCGAACTCTACCGTCGTTACCCGTCGCTTGGTGGCATGAGTGGAGTGGGTATGGACAATGCCAC > 1:2360465/1‑65 TGGCATGAGTGGAGTGGGTATGGACAATGCCACCAAGCGACGGGTAACGACGGTAGAGTTCGAGATGCGTCGCAGTGTCGGAAGATGGGCGATACTCCCCTTCCACCACCTTGCCGCTCATATCAACCACCACCATATCGGCCGCTTTCA < 1:811901/150‑1 TGGCATGAGTGGAGTGGGTATGGACAATGCCACCAAGCGACGGGTAACGACGGTAGAGTTCGAGATGCGTCGCAGTGTCGGAAGATGGGCGATACTCCCCTTCCACCACCTTGCCGCTCATATCAACCACCACCATATCGGCCGCTTTCA < 2:677238/150‑1 GGCATGAGTGGAGTGGGTATGGACAATGCCACCAAGCGACGGGTAACGACGGTAGAGTTCGAGATGCGTCGCAGTGTCGGAAGATGGGCGATACTCCCCTTCCACCACCTTGCCGCTCATATCAACCACCACCATATCGGCCGCTTTCAT < 2:3944214/150‑1 GGCATGAGTGGAGTGGGTATGGACAATGCCACCAAGCGACGGGTAACGACGGTAGAGTTCGAGATGCGTCGCAGTGTCGGAAGATGGGCGATACTCCCCTTCCACCACCTTGCCGCTCATATCAACCACCACCATATCGGCCGCTTTCAT > 1:3457989/1‑150 CATGAGTGGAGTGGGTATGGACAATGCCACCAAGCGACGGGTAACGACGGTAGAGTTCGAGATGCGTCGCAGTGTCGGAAGATGGGCGATACTCCCCTTCCACCACCTTGCCGCTCATATCAACCACCACCATATCGGCCGCTTTCATGG > 1:1027260/1‑150 ATGAGTGGAGTGGGTATGGACAATGCCACCAAGCGACGGGTAACGACGGTAGAGTTCGAGATGCGTCGCAGTGTCAGAAGATGGGCGATACTCCCCTTCCACCACCTTGCCGCTCATATCAACCACCACCATATCGGCCGCTTTCATGGT > 1:364301/1‑150 TGAGTGGAGTGGGTATGGACAATGCCACCAAGCGACGGGTAACGACGGTAGAGTTCGAGATGCGTCGCAGTGTCGGAAGATGGGCGATACTCCCCTTCCACCACCTTGCCGCTCATATCAACCACCACCATATCGGCCGCTTTCATGGTT < 2:257421/150‑1 TGAGTGGAGTGGGTATGGACAATGCCACCAAGCGACGGGTAACGACGGTAGAGTTCGAGATGCGTCGCAGTGTCGGAAGATGGGCGATACTCCCCTTCCACCACCTTGCCGCTCATATCAACCACCACCATATCGGCCGCTTTCATGGTT < 1:1689666/150‑1 TGATCAAGCCCAGCGGCGTTGCCTACGAAACCATGAAAGCGGCCGATATGGTGGTGGTTGATATGAGCGGCAAGGTGGTGGAAGGGGAGTATCGCCCATCTTCCGACACTGCGACGCATCTCGAACTCTACCGTCGTTACCCGTCGCTTGGTGGCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP012306/3852917‑3853073‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtggcatGAGTGGAGTGGGTATGGACAATGCCACCAAGCGACGGGTAACGACGGTAGAGTTCGAGATGCGTCGCAGTGTCGGAAGATGGGCGATACTCCCCTTCCACCACCTTGCCGCTCATATCAACCACCACCATATCGGCCGCTTTCATGGTT < AP012306/3853093‑3852945 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |