| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP012306 | = 42209 | 248 (0.830) | 7 (0.030) | 7/270 | 9.2 | 3.0% | coding (139/531 nt) | kefF | flavoprotein subunit for the KefC potassium efflux system |
| ? | AP012306 | = 42195 | 231 (0.860) | coding (125/531 nt) | kefF | flavoprotein subunit for the KefC potassium efflux system | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
AAGGCGTAATCACGCGGGCTACCTATGATTCTTATAATTTATGCGCATCCGTATCCGCATCATTCCCATGCGAATAAACGGATGCTTGAACAGGCAAGGACGCTGGAAGGCGTCGAAATTCGCTCTCTTTATCAACTCTATCCTGACTTCAATATCGATATTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP012306/42047‑42209‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caatatcgatattgAAGTCAGGATAGAGTTGATAAAGAGAGCGAATTTCGACGCCTTCCAGCGTCCTTGCCTGTTCAAGCATCCGTTTATTCGCATGGGAATGATGCGGATACGGATGCGCATAAATTATAAGAATCATAGGTAGCCCGCGTGATTACGCCTT < AP012306/42195‑42047 AAGGCGTAATCACGCGGGCTACCTATGATTCTTATAATTTATGCGCATCCGTATCCGCATCATTCCCATGCGAATAAACGGGTGCTTGAACAGGCAAGGACGCTGGAAGGCGTCGAAATTCGCTCTCTTTATCAACTCTATCCTGACTTC < 2:1624914/150‑1AAGGCGTAATCACGCGGGCTACCTATGATTCTTATAATTTATGCGCATCCGTATCCGCATCATTCCCATGCGAATAAACGGCTGCTTGAACAGGCAAGGACGCTGGAAGGCGTCGAAATTCGCTCTCTTTATCAACTCTATCCTGACTTC < 2:3864584/150‑1AAGGCGTAATCACGCGGGCTACCTATGATTCTTATAATTTATGCGCATCCGTATCCGCATCATTCCCATGCGAATAAACGGATGCTTGAACAGGCAAGGACGCTGGAAGGCGTCGAAATTCGCTCTCTTTATCAACTCTATCCTGACTTC < 1:3464375/150‑1 AGGCGTAATCACGCGGGCTACCTATGATTCTTATAATTTATGCGCATCCGTATCCGCATCATTCCCATGCGAATAAACGGTTGCTTGAACAGGCAAGGACGCTGGAAGGCGTCGAAATTCGCTCTCTTTATCAGCTCTATCCTGACTTCA < 2:1760057/150‑1 AGGCGTAATCACGCGGGCTACCTATGATTCTTATAATTTATGCGCATCCGTATCCGCATCATTCCCATGCGAATAAACGGGTGCTTGAACAGGCAAGGACGCTGGAAGGCGTCGAAATTCGCTCTCTTTATCAACTCTATCCTGACTTCA < 2:1280948/150‑1 GCGTAATCACGCGGGCTACCTATGATTCTTATAATTTATGCGCATCCGTATCCGCATCATTCCCATGCGAATAAACGGATGCTTGAACAGGCAAGGACGCTGGAAGGCGTCGAAATTCGCTCTCTTTATCAACTCTATCCTGACTTCAAT > 1:3030155/1‑150 AATCACGCGGGCTACCTATGATTCTTATAATTTATGCGCATCCGTATCCGCATCATTCCCATGCGAATAAACGGCTGCTTGAACAGGCAAGGACGCTGGAAGGCGTCGAAATTCGCTCTCTTTATCAACTCTATCCTGACTTCAATATCG < 2:1567815/150‑1 CACGCGGGCTACCTATGATTCTTATAATTTATGCGCATCCGTATCCGCATCATTCCCATGCGAATAAACGGATGCTTGAACAGGCAAGGACGCTGGAAGGCGTCGAAATTCGCTCTCTTTATCAACTCTATCCTGACTTCAATATCGATA > 1:2873621/1‑150 CGCGGGCTACCTATGATTCTTATAATTTATGCGCATCCGTATCCGCATCATTCCCATGCGAATAAACGGATGCTTGAACAGGCAAGGACGCTGGAAGGCGTCGAAATTCGCTCTCTTTATCAACTCTATCCTGACTTCAATATCGATATT > 2:1855624/1‑150 CGCGGGCTACCTATGATTCTTATAATTTATGCGCATCCGTATCCGCATCATTCCCATGCGAATAAACGGATGCTTGAACAGGCAAGGACGCTGGAAGGCGTCGAAATTCGCTCTCTTTATCAACTCTATCCTGACTTCAATATCGATATT < 1:2419337/150‑1 GCGGGCTACCTATGATTCTTATAATTTATGCGCATCCGTATCCGCATCATTCCCATGCGAATAAACGGATGCTTGAACAGGCAAGTACGCTGGAAGGCGTCGAAATTCGCTCTCTTTATCAACTCTATCCTGACTTCAATATCGATATTG < 2:2657007/150‑1 GCGGGCTACCTATGATTCTTATAATTTATGCGCATCCGTATCCGCATCATTCCCATGCGAATAAACGGATGCTTGAACAGGCAAGGACGCTGGAAGGCGTCGAAATTCGCTCTCTTTATCAACTCTATCCTGACTTCAATATCGATATTG < 1:3942971/150‑1 GTATCCGCATCATTCCCATGCGAATAAACGGATGCTTGAACAGGCAAGGACGCTGGAAGGCGTCGAAATTCGCTCTCTTTATCAACTCTATCCTGACTTCAATATCGATATTGAAGTCAGGATAGAGTTGATAAAGAGAGCGAATTTCGA > 1:758554/1‑150 CATGCGAATAAACGGATGCTTGAACAGGCAAGGACGCTGGAAGGCGTCGAAATTCGCTCTCTTTATCAACTCTATCCTGACTTCAATATCGATATTGAAGTCAGGATAGAGTTGATAAAGAGAGCGAATTTCGACGCCTTCCAGCGTCCT < 2:758554/150‑1 CAGGCAAGGACGCTGGAAGGCGTCGAAATTCGCTCTCTTTATCAACTCTATCCTGACTTCAATATCGATATTGAAGTCAGGATAGAGTTGATAAAGAGAGCGAATTTCGACGCCTTCCAGCGTCCTTGCCTGTTCAAGCATCCGTTTATT > 2:1286601/1‑150 GCAAGGACGCTGGAAGGCGTCGAAATTCGCTCTCTTTATCATCTCTATCCTGACTTCAATATCGATATTGAAGTCAGGATAGAGTTGATAAAGAGAGCGAATTTCGACGCCTTCCAGCGTCCTTGCCTGTTCAAGCATCCGTTTATTCGC > 2:1579893/1‑150 AGGACGCTGGAAGGCGTCGAAATTCGCTCTCTTTATCAACTCTATCCTGACTTCAATATCGATATTGAAGTCAGGATAGAGTTGATAAAGAGAGCGAATTTCGACGCCTTCCAGCGTCCTTGCCTGTTCAAGCATCCGTTTATTCGCATG > 2:3682391/1‑150 ACGCTGGAAGGCGTCGAAATTCGCTCTCTTTATCAACTCTATCCTGACTTCAATATCGATATTGAAGTCAGGATAGAGTTGATAAAGAGAGCGAATTTCGACGCCTTCCAGCGTCCTTGCCTGTTCAAGCATCCGTTTATTCGCATGGGA > 2:3965852/1‑150 TCGAAATTCGCTCTCTTTATCAACTCTATCCTGACTTCAATATCGATATTGAAGTCAGGATAGAGTTGATAAAGAGAGCGAATTTCGACGCCTTCCAGCGTCCTTGCCTGTTCAAGCATCCGTTTATTCGCATGGGAATGATGCGGATAC < 1:3682391/150‑1 CAATATCGATATTGAAGTCAGGATAGAGTTGATAAAGAGAGCGAATTTCGACGCCTTCCAGCGTCCTTGCCTGTTCAAGCATCCGTTTATTCGCATGGGAATGATGCGGATACGGATGCGCATAAATTATAAGAATCATAGGTAGCCCGC > 2:2473135/1‑150 AATATCGATATTGAAGTCAGGATAGAGTTGATAAAGAGAGCGAATTTCGACGCCTTCCAGCGTCCTTGCCTGTTCAAGCATCCGTTTATTCGCATGGGAATGATGCGGATACGGATGCGCATAAATTATAAGAATCATAGGTAGCCCGCG > 1:1841578/1‑150 TATCGATATTGAAGTCAGGATAGAGTTGATAAAGAGAGCGAATTTCGACGCCTTCCAGCGTCCTTGCCTGTTCAAGCATCCGTTTATTCGCATGGGAATGATGCGGATACGGATGCGCATAAATTATAAGAATCATAGGTAGCCCGCGTG > 2:3876778/1‑150 TATCGATATTGAAGTCAGGATAGAGTTGATAAAGAGAGCGAATTTCGACGCCTTCCAGCGTCCTTGCCTGTTCAAGCATCCGTTTATTCGCATGGGAATGATGCGGATACGGATGCGCATAAATTATAAGAATCATAGGTAGCCCGCGTG > 2:2035492/1‑150 ATCGATATTGAATTCAGGATAGAGTTGATAAAGAGAGCGAATTTCGACGCCTTCCAGCGTCCTTGCCTGTTCAAGCATCCGTTTATTCGCATGGGAATGATGCGGATACGGATGCGCATAAATTATAAGAATCATAGGTAGCCCGCGTGA > 1:2387313/1‑150 ATCGATATTGAAGTCAGGATAGAGTTGATAAAGAGAGCGAATTTCGACGCCTTCCAGCGTCCTTGCCTGTTCAAGCATCCGTTTATTCGCATGGGAATGATGCGGATACGGATGCGCATAAATTATAAGAATCATAGGTAGCCCGCGTGA > 1:373104/1‑150 ATCGATATTGAAGTCAGGATAGAGTTGATAAAGAGAGCGAATTTCGACGCCTTCCAGCGTCCTTGCCTGTTCAAGCATCCGTTTATTCGCATGGGAATGATGCGGATACGGATGCGCATAAATTATAAGAATCATAGGTAGCCCGCGTGA > 1:188271/1‑150 ATCGATATTGAAGTCAGGATAGAGTTGATAAAGAGAGCGAATTTCGACGCCTTCCAGCGTCCTTGCCTGTTCAAGCATCCGTTTATTCGCATGGGAATGATGCGGATACGGATGCGCATAAATTATAAGAATCATAGGTAGCCCGCGTGA > 2:3370222/1‑150 GATATTGAAGTCAGGATAGAGTTGATAAAGAGAGCGAATTTCGACGCCTTCCAGCGTCCTTGCCTGTTCAAGCATCCGTTTATTCGCATGGGAATGATGCGGATACGGATGCGCATAAATTATAAGAATCATAGGTAGCCCGCGTGATTA < 2:93680/150‑1 GATATTGAAGTCAGGATAGAGTTGATAAAGAGAGCGAATTTCGACGCCTTCCAGCGTCCTTGCCTGTTCAAGCATCCGTTTATTCGCATGGGAATGATGCGGATACGGATGCGCATAAATTATAAGAATCATAGGTAGCCCGCGTGATTA < 2:3180102/150‑1 GATATTGAAGTCAGGATAGAGTTGATAAAGAGAGCGAATTTCGACGCCTTCCAGCGTCCTTGCCTGTTCAAGCAGCCGTTTATTCGCATGGGAATGATGCGGATACGGATGCGCATAAATTATAAGAATCATAGGTAGCCCGCGTGATTA > 2:1092958/1‑150 TGAAGTCAGGATAGAGTTGATAAAGAGAGCGAATTTCGACGCCTTCCAGCGTCCTTGCCTGTTCAAGCATCCGTTTATTCGCATGGGAATGATGCGGATACGGATGCGCATAAATTATAAGAATCATAGGTAGCCCGCGTGATTACGCCT > 1:3673831/1‑150 TGAAGTCAGGATAGAGTTGATAAAGAGAGCGAATTTCGACGCCTTCCAGCGTCCTTGCCTGTTCAAGCATCCGTTTATTCGCATGGGAATGATGCGGATACGGATGCGCATAAATTATAAGAATCATAGGTAGCCCGCGTGATTACGCCT < 1:3594299/150‑1 GAAGTCAGGATAGAGTTGATAAAGAGAGCGAATTTCGACGCCTTCCAGCGTCCTTGCCTGTTCAAGCATCCGTTTATTCGCATGGGAATGATGCGGATACGGATGCGCATAAATTATAAGAATCATAGGTAGCCCGCGTGATTACGCCTT > 2:1456775/1‑150 AAGGCGTAATCACGCGGGCTACCTATGATTCTTATAATTTATGCGCATCCGTATCCGCATCATTCCCATGCGAATAAACGGATGCTTGAACAGGCAAGGACGCTGGAAGGCGTCGAAATTCGCTCTCTTTATCAACTCTATCCTGACTTCAATATCGATATTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP012306/42047‑42209‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caatatcgatattgAAGTCAGGATAGAGTTGATAAAGAGAGCGAATTTCGACGCCTTCCAGCGTCCTTGCCTGTTCAAGCATCCGTTTATTCGCATGGGAATGATGCGGATACGGATGCGCATAAATTATAAGAATCATAGGTAGCCCGCGTGATTACGCCTT < AP012306/42195‑42047 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |