Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | AP012306 | 524,289 | 0 | T | G | 24.2% | 328.3 / 13.6 | 133 | N4T (AAC→ACC) | citD | citrate lyase, acyl carrier (gamma) subunit |
Reads supporting (aligned to +/- strand): ref base T (19/81); new base G (32/0); total (52/81) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.06e-17 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
Only 100 of 172 total aligned reads displayed.
CGAGAACGTCCAGAATGGTGGTGCGAATTGCATCGCCAAACTGTTTCTCAACGCTGCTATTGATTTGCAGGTCGATATCCTGCGTATCGAGTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGC‑TGGTTTATTTTCATTTTTCACCTGTTTCTCATGCGGGGGTCTTTTGACGAGCTGCCGCGTCCTGGCGGGAGTGCTCAAGCAGGTTC‑TGCAAATAATGCAGCGTGACTGCAGGGACCAGCGGCGCGATAGCCGTGAGATCGTTTTTCGCCAGC > AP012306/524140‑524437 | cGAGAACGTCCAGAATGGTGGTGCGAATTGCATCGCCAAACTGTTTCTCAACGCTGCTATTGATTTGCAGGTCGATATCCTGCGTATCGAGTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGC‑TGGt < 1:2656807/150‑1 (MQ=255) gagaACGTCCAGAATGGTGGTGCGAATTGCATCGCCAAACTGTTTCTCAACGCTGCTATTGATTTGCAGGTCGATATCCTGCGTATCGAGTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGC‑TGGtt < 2:2415264/150‑1 (MQ=255) gagaACGTCCAGAATGGTGGTGCGAATTGCATCGCCAAACTGTTTCTCAACGCTGCTATTGATTTGCAGGTCGATATCCTGCGTATCGAGTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGC‑TGGtt < 2:2090066/150‑1 (MQ=255) agaACGTCCAGAATGGTGGTGCGAATTGCATCGCCAAACTGTTTCTCAACGCTGCTATTGATTTGCAGGTCGATATCCTGCGTATCGAGTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGC‑TGGgtt > 2:1597209/1‑150 (MQ=255) aCGTCCAGAATGGTGGTGCGAATTGCATCGCCAAACTGTTTCTCAACGCTGCTATTGATTTGCAGGTCGATATCCTGCGTATCGAGTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGC‑TGGTTTAtt > 2:831669/1‑150 (MQ=255) gTCCAGAATGGTGGTGCGAATTGCATCGCCAAACTGTTTCTCAACGCTGCTATTGATTTGCAGGTCGATATCCTGCGTATCGAGTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGG‑TGGGTtttttt > 2:2289558/1‑150 (MQ=255) gTCCAGAATGGTGGTGCGAATTGCATCGCCAAACTGTTTCTCAACGCTGCTATTGATTTGCAGGTCGATATCCTGCGTATCGAGTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGG‑CGGtttttttt > 2:3389440/1‑150 (MQ=255) gTCCAGAATGGTGGTGCGAATTGCATCGCCAAACTGTTTCTCAACGCTGCTATTGATTTGCAGGTCGATATCCTGCGTATCGAGTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGC‑TGGTTTAtttt < 1:3135646/150‑1 (MQ=255) ccAGAATGGTGGTGCGAATTGCATCGCCAAACTGTTTCTCAACGCTGCTATTGATTTGCAGGTCGATATCCTGCGTATCGAGTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGC‑TGGGTTAttttta > 1:1037109/1‑148 (MQ=255) cAGAATGGTGGTGCGAATTGCATCGCCAAACTGTTTCTCAACGCTGCTATTGATTTGCAGGTCGATATCCTGCGTATCGAGTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGC‑TGGttttttttttt > 2:2166068/1‑147 (MQ=255) cAGAATGGTGGTGCGAATTGCATCGCCAAACTGTTTCTCAACGCTGCTATTGATTTGCAGGTCGATATCCTGCGTATCGAGTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGC‑TGGTTTATTTTCAt < 1:435636/150‑1 (MQ=255) cAGAATGGTGGTGCGAATTGCATCGCCAAACTGTTTCTCAACGCTGCTATTGATTTGCAGGTCGATATCCTGCGTATCGAGTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGC‑CGGGTTTTTTTTAt > 2:2921674/1‑150 (MQ=255) gAATGGTGGTGCGAATTGCATCGCCAAACTGTTTCTCAACGCTGCTATTGATTTGCAGGTCGATATCCTGCGTATCGAGTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGC‑TGGGTttttttttttt > 2:1060310/1‑145 (MQ=255) aaTGGTGGTGCGAATTGCATCGCCAAACTGTTTCTCAACGCTGCTATTGATTTGCAGGTCGATATCCTGCGTATCGAGTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGC‑TGGTTTATTTTCAtttt < 1:1449213/150‑1 (MQ=255) aaTGGTGGTGCGAATTGCATCGCCAAACTGTTTCTCAACGCTGCTAGTGATTTGCAGGTCGATATCCTGCGTATCGAGTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGC‑TGGTTTATTTTCAtttt < 2:1214050/150‑1 (MQ=255) aTGGTGGTGCGAATTGCATCGCCAAACTGTTTCTCAACGCTGCTATTGATTTGCAGGTCGATATCCTGCGTATCGAGTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGC‑TGGTTTATTTTCAttttt < 2:255137/150‑1 (MQ=255) tggtggTGCGAATTGCATCGCCAAACTGTTTCTCAACGCTGCTATTGATTTGCAGGTCGATATCCTGCGTATCGAGTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGC‑TGGTTTATTTTCATTTTTc < 2:1328309/150‑1 (MQ=255) ggtggtTCGAATTGCTTCGCCAAACTGTTTCTCAACGCTGCTATTGAGTTGCAGGTCGATATCCTGCGTATCGAGTGGGGCGATGCGTATCATCACATCCCCAGACTGAAGGGTGCCTGGAACGGGGGGC‑TGGTTTATTTTCATTTTTCa < 2:1740128/150‑1 (MQ=255) ggtggtGCGAATTGCATCGCCAAACTGTTTCTCAACGCTGCTATTGATTTGCAGGTCGATATCCTGCGTATCGAGTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGC‑TGGTTTATTTTCATTTTTCa < 2:938306/150‑1 (MQ=255) gtggtgCGAATTGCATCGCCAAACTGTTTCTCAACGCTGCTATTGATTTGCAGGTCGATATCCTGCGTATCGAGTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGC‑TGGTTTATTTTCATTTTTCAc < 2:763514/150‑1 (MQ=255) tggtgCGAATTGCATCGCCAAACTGTTTCTCAACGCTGCTATTGATTTGCAGGTCGATATCCTGCGTATCGAGTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGC‑TGG‑TTATTTTTATTTTTCACCt > 1:504116/1‑150 (MQ=255) tgCGAATTGCATCGCCAAACTGTTTCTCAACGCTGCTATTGATTTGCAGGTCGATATCCTGCGTATCGAGTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGC‑TGGTTTATTTTCATTTTTCACCTGt < 2:4348352/150‑1 (MQ=255) cGAATTGCATCGCCAAACTGTTTCTCAACGCTGCTATTGATTTGCAGGTCGATATCCTGCGTATCGAGTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGC‑TGGTTTATTTTCATTTTTCACCTGttt < 2:40106/150‑1 (MQ=255) gAATTGCATCGCCAAACTGTTTCTCAACGCTGCTATTGATTTGCAGGTCGATATCCTGCGTATCGAGTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGC‑TGGTGTATTTTCATTTTTCACCCGTTtc > 1:586022/1‑150 (MQ=255) gAATTGCATCGCCAAACTGTTTCTCAACGCTGCTATTGATTTGCAGGTCGATATCCTGCGTATCGAGTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGC‑TGGGTTTTTTTTATTTTTTTCCCGtttt > 2:3186571/1‑149 (MQ=255) tGCATCGCCAAACTGTTTCTCAACGCTGCTATTGATTTGCAGGTCGATATCCTGCGTATCGAGTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGC‑TGGTTTATTTTCATTTTTCACCTGTTTCTCAt < 1:1232457/150‑1 (MQ=255) cATCGCCAAACTGTTTCTCAACGCTGCTATTGATTTGCAGGTCGATATCCTGCGTATCGAGTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGC‑TGGGTTTTTTTTCTTTTTTTCCCGTTTTTCCTGc > 2:3876299/1‑150 (MQ=255) cATCGCCAAACTGTTTCTCAACGCTGCTATTGATTTGCAGGTCGATATCCTGCGTATCGAGTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGC‑TGGATTATTTTTCTTTTTGACCTTTTTCTCATgt > 1:3446633/1‑149 (MQ=255) tCGCCAAACTGTTTCTCAACGCTGCTATTGATTTGCAGGTCGATATCCTGCGTATCGAGTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGC‑TGGTTTATTTTCATTTTTCACCTGTTTCTCATGCgg < 1:2250269/150‑1 (MQ=255) cGCCAAACTGTTTCTCAACGCTGCTATTGATTTGCAGGTCGATATCCTGCGTATCGAGTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGC‑TGGGTTATTTTCATTTTTCACCTGTTTCTCATGCggg > 1:1846417/1‑150 (MQ=255) gCCAAACTGTTTCTCAACGCTGCTATTGATTTGCAGGTCGATATCCTGCGTATCGAGTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGC‑TGGGTTTTTTTCTTTTTTTTCCACTTTCTCCTGCgggg > 2:3068600/1‑150 (MQ=255) ccAAACTGTTTCTCAACGCTGCTATTGATTTGCAGGTCGATATCCTGCGTATCGAGTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGG‑TGGTTTTTTTTTTTTTTTTACCTGTTTTTCATGCggggg > 2:3752377/1‑150 (MQ=255) ccAAACTGTTTCTCAACGCTGCTATTGATTTGCAGGTCGATATCCTGCGTATCGAGTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGC‑TGGGTTATTTTTATTTTTTACCTGTTTTTCCTTCggggg > 1:3350655/1‑150 (MQ=255) cAAACTGTTTCTCAACGCTGCTATTGATTTGCAGGTCGATATCCTGCGTATCGAGTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGC‑TGGGTTATTTTTATTTTTTACCTGTTTTTCATGCgggggg > 1:328960/1‑149 (MQ=255) aaaCTGTTTCTCAACGCTGCTATTGATTTGCAGGTCGATATCCTGCGTATCGAGTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGC‑TGGGTTATTTTTATTTTTTTCCTGTTTTTCATGCggggggc > 2:2769211/1‑148 (MQ=255) aCTGTTTCTCAACGCTGCTATTGATTTGCAGGTCGATATCCTGCGTATCGAGTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGC‑TGGTTTATTTTCATTTTTCACCTGTTTCTCATGCGGGGGTCtt < 1:4383706/150‑1 (MQ=255) tGTTTCTCAACGCTGCTATTGATTTGCAGGTCGATATCCTGCGTATCGAGTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGC‑TGGTTTATTTTCATTTTTTTCCTGGTTCTCATGCGGGGGTCtttt > 1:3571495/1‑150 (MQ=255) tGTTTCTCAACGCTGCTATTGATTTGCAGGTCGATATCCTGCGTATCGAGTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGC‑TGGTTTATTTTCATTTTTCACCTGTTTCTCATGCGGGGGTCtttt < 2:2266347/150‑1 (MQ=255) gTTTCTCAACGCTGCTATTGATTTGCAGGTCGATATCCTGCGTATCGAGTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGG‑TGGGTTTTTTTTTTTTTTTTCCTTTTTTTTCTTTGGGGGGCttttt > 2:2060133/1‑149 (MQ=255) gTTTCTCAACGCTGCTATTGATTTGCAGGTCGATATCCTGCGTATCGAGTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGC‑TGGTTTATTTTCATTTTTCACCTGTTTCTCATGCGGGGGTCTTTTg < 2:3362969/150‑1 (MQ=255) gTTTCTCAACGCTGCTATTGATTTGCAGGTCGATATCCTGCGTATCGAGTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGC‑TGGTTTATTTTCATTTTT‑ACCTGTTTCTCATGCGGGGGGCttttta > 1:1922750/1‑148 (MQ=255) tttCTCAACGCTGCTATTGATTTGCAGGTCGATATCCTGCGTATCGAGTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGC‑TGGTTTATTTTCATTTTTCACCCGTTTCTCATTCGGGGGGCttttta > 1:3487114/1‑148 (MQ=255) ttCTCAACGCTGCTATTGATTTGCAGGTCGATATCCTGCGTATCGAGTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGC‑TGGTTTATTTTCATTTTTCACCTGTTTCTCATGCGGGGGTCTTTTGAc < 2:3913284/150‑1 (MQ=255) ttCTCAACGCTGCTATTGATTTGCAGGTCGATATCCTGCGTATCGAGTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGC‑GGGATTATTTTCCTTTTTTACCCGTTTCTCATATGGGGGGGTTTTTAc > 2:2623239/1‑150 (MQ=255) tctcAACGCTGCTATTGATTTGCAGGTCGATATCCTGCGTATCGAGTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGC‑TTGTTTTTTTTTATTTTTCACCTTTTTTTCATGCGGGGGTCTTTTTACg > 1:3032401/1‑150 (MQ=255) ctcAACGCTGCTATTGATTTGCAGGTCGATATCCTGCGTATCGAGTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGC‑CGGTTTATTTTCATTTTTTACCTGTTTCTTATGCGGGGGGCTTTTGAcca > 1:2457864/1‑148 (MQ=255) cAACGCTGCTATTGATTTGCAGGTCGATATCCTGCGTATCGAGTGGGGCGATGCGTATCATCACATCCCCGGACTCAAGGGTGCCTGCAACGGCGGGC‑TGGGTTATTTTTATTTTTTACCTGTTTCTCCTTCGGGGGGCTTTTTACGAGc > 1:4009623/1‑150 (MQ=255) cAACGCTGCTATTGATTTGCAGGTCGATATCCTGCGTATCGAGTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGC‑TGGGTTTTTTTTATTTTTTTCCCGTTTTTCATTCCGGGGGGttttttctagg > 2:547191/1‑143 (MQ=255) aaCGCTGCTATTGATTTGCAGGTCGATATCCTGCGTATCGAGTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGC‑TGGtt < 1:4197383/102‑1 (MQ=255) aaCGCTGCTATTGATTTGCAGGTCGATATCCTGCGTATCGAGTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGC‑TGGGTTATTTTTATTTTTCACCTGTTTCTCATGCGGGGGGGTTTTTACGAGcg > 2:1658221/1‑149 (MQ=255) aCGCTGCTATTGATTTGCAGGTCGATATCCTGCGTATCGAGTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGC‑TGGGTTTTTTTTTTTTTTTCCCCGTTTTTCATTCGGGGGGCTTTTGGCggggtt > 2:1268558/1‑145 (MQ=255) ctgctATTGATTTGCAGGTCGATATCCTGCGTATCGAGTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGG‑TGGGTTTTTTTTATTTTTTACCTGTTTCTCATGCGGGGGGCTTTTTTCGAGCTGCcg > 2:1570797/1‑150 (MQ=255) ctgctATTGATTTGCAGGTCGATATCCTGCGTATCGAGTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGCGGGGTTTTTTTTCTTTTTTTCCCT‑TTTTTCTTTCGGGGGGCTTTTGACGGGcctccg > 2:109248/1‑145 (MQ=255) ctgctATTGATTTGCAGGTCGATATCCTGCGTATCGAGTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGC‑TCGGTTATTTTTATTTTTCTCCTGTTTCTCATGCGGGGGGCTTTTTACCAGCTGccc > 1:687888/1‑149 (MQ=255) tgctATTGATTTGCAGGTCGATATCCTGCGTATCGAGTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGC‑TGGTTTATTTTCATTTTTCACCTGTTTCTCATGCGGGGGTCTTTTGACGAGCTGCcgc < 2:4182276/150‑1 (MQ=255) ctATTGATTTGCAGGTCGATATCCTGCGTATCGAGTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGC‑TGGGTTATTTTTATTTTTTACCTGTTTTTCCTGCGGGGGGCTTTTGACGAGCTGCcccgg > 1:1332027/1‑149 (MQ=255) tATTGATTTGCAGGTCGATATCCTGCGTATCGAGTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGC‑TGGTTTATTTTCATTTTTCACCTGTTTCTCATGCGGGGGTCTTTTGACGAGCTGCCGCGTc < 1:45187/150‑1 (MQ=255) aTTGATTTGCAGGTCGATATCCTGCGTATCGAGTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGC‑TGGTTTATTTTCATTTTTCACCTGTTTCTCATGCGGGGGTCTTTTGACGAGCTGCCGCGTcc < 2:2067786/150‑1 (MQ=255) ttGATTTGCAGGTCGATATCCTGCGTATCGAGTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGC‑TGGTTTATTTTCATTTTTCACCTGTTTCTCATGCGGGGGTCTTTTGACGAGCTGCCGCGTCCt < 2:2243828/150‑1 (MQ=255) tGATTTGCAGGTCGATATCCTGCGTATCGAGTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGC‑TGGGTTTTTTTTATTTTTTACCTGTTTCTCCTGCGGGGGGCTTTTTTCGAGCTGCCCCGGCCTg > 1:4042688/1‑150 (MQ=255) aTTTGCAGGTCGATATCCTGCGTATCGAGTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGC‑TGGTTTATTTTCATTTTTCACCTGTTTCTCATGCGGGGGTCTTTTGACGAGCTGCCGCGTCCTGGc < 1:1175525/150‑1 (MQ=255) aTTTGCAGGTCGATATCCTGCGTATCGAGTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGC‑TGGGTTATTTTTATTTTTTACCTGTTTTTCATTCGGGGGGCTTTTTACGAGCTGCCGCGTCCTGGc > 1:587391/1‑150 (MQ=255) aTTTGCAGGTCGATATCCTGCGTATCGAGTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGC‑TGGGTTATTTTTATTTTTTACCTGTTTCTCATGCGGGGGGCTTTTTACGAGCTGCCGCGTCCTGGc > 1:203614/1‑150 (MQ=255) ttGCAGGTCGATATCCTGCGTATCGAGTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGC‑TGGGTTATTTTTATTTTTTACCTGTTTCTCATGCGGGGGGCTTTTTACGAGCTGCCGCGTCCTCGCgg > 1:861930/1‑150 (MQ=255) tGCAGGTCGATATCCTGCGTATCGAGTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGC‑TGGGTTTTTTTTTTTTTTTTCCCGTTTCTTCTTCGGGGGGCTTTTTTCGGGCTGCCGCGTCCTGGCggg > 2:2253287/1‑150 (MQ=255) cAGGTCGATATCCTGCGTATCGAGTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGG‑CGGGTTATTTTTTTTTTTTTCCTGTTTTTTATGCGGGGGGCTTTTTGCGAGCGGCCGCGCTCTGGCggggg > 2:2634393/1‑148 (MQ=255) gTCGATATCCTGCGTATCGAGTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGC‑TGGTTTATTTTCATTTTTCACCTGTTTCTCATGCGGGGGTCTTTTGACGAGCTGCCGCGTCCTGGCGGGAGTGc < 2:1977166/150‑1 (MQ=255) gTCGATATCCTGCGTATCGAGTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGC‑TGGGTTATTTTTATTTTTTACCCGTTTTTCATTCGGGGGGCTTTTTTCGAGCTGCCGCGTCCCGGCgggggggg > 2:2356580/1‑145 (MQ=255) atCCTGCGTATCGAGTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGC‑TGGTTTATTTTCATTTTTCACCTGTTTCTCATGCGGGGGTCTTTTGACGAGCTGCCGCGTCCTGGCGGGAGTGCTCAAGc < 2:638075/150‑1 (MQ=255) cGAGTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGC‑TGGTTTATTTTCATTTTTCACCTGTTTCTCATGCGGGGGTCTTTTGACGAGCTGCCGCGTCCTGGCGGGAGTGCTCAAGCAGGTTC‑TGCaa < 1:3686154/150‑1 (MQ=255) gAGTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGC‑TGGTTTATTTTCATTTTTCACCTGTTTCTCATGCGGGGGTCTTTTGACGAGCTGCCGCGTCCTGGCGGGAGTGCTCAAGCAGGTTC‑TGCaaa < 1:1052905/150‑1 (MQ=255) gTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGC‑TGGTTTATTTTCATTTTTCACCTGTTTCTCATGCGGGGGTCTTTTGACGAGCTGCCGCGTCCTGGCGGGAGTGCTCAAGCAGGTTC‑TGCAaata < 2:692341/150‑1 (MQ=255) tGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGC‑TGGTTTATTTTCATTTTTCACCTGTTTCTCATGCGGGGGTCTTTTGACGAGCTGCCGCGTCCTGGCGGGAGTGCTCAAGCAGGTTC‑TGCAaataa < 2:4392875/150‑1 (MQ=255) gCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGC‑TGGTTTATTTTCATTTTTCACCTGTTTCTCATGCGGGGGTCTTTTGACGAGCTGCCGCGTCCTGGCGGGAGTGCTCAAGCAGGTTC‑TGCAAATAATGCa < 1:897093/150‑1 (MQ=255) gATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGC‑TGGGTTATTTTTATTTTTTACCTGTTTCTCATGCGGGGGGCTTTTTTCGAGCTGCCGCGTCCCGGCGGGGGGGGTCAAGCAGGGTCTTGCaaaaaagccga > 2:347807/1‑145 (MQ=255) aTGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGC‑TGGTTTATTTTCATTTTTCACCTGTTTCTCATGCGGGGGTCTTTTGACGAGCTGCCGCGTCCTGGCGGGAGTGCTCAAGCAGGTTC‑TGCAAATAATGCAGCg < 1:2617734/150‑1 (MQ=255) gTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGC‑TGGTTTATTTTTCTTTTTTACCTGTTTCTCATGCGGGGGGCTTTTTACGAGCTGCCGCGTCCCGGCGGGGGGGCGCCAGCAAGGTT‑TTCAAAAAAAACAGCggggc > 2:1850879/1‑146 (MQ=255) atcatcACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGC‑TGGTTTATTTTCATTTTTCACCTGTTTCTCATGCGGGGGTCTTTTGACGAGCTGCCGCGTCCTGGCGGGAGTGCTCAAGCAGGTTC‑TGCAAATAATGCAGCGTGACTg < 2:1406136/150‑1 (MQ=255) tcaCATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGC‑TGGTTTATTTTCATTTTTCACCTGTTTCTCATGCGGGGGTCTTTTGACGAGCTGCCGCGTCCTGGCGGGAGTGCTCAAGCAGGTTC‑TGCAAATAATGCAGCGTGACTGCAgg < 1:2276531/150‑1 (MQ=255) cacaTCCCCAGACTCAAGGGTGCCTGCAACGGCGGGC‑TGGTTTATTTTCATTTTTCACCTGTTTCTCATGCGGGGGTCTTTTGACGAGCTGCCGCGTCCTGGCGGGAGTGCTCAAGCAGGTTC‑TGCAAATAATGCAGCGTGACTGCAggg < 1:3257692/150‑1 (MQ=255) cacaTCCCCAGACTCAAGGGTGCCTGCAACGGCGGGC‑TGGTTTATTTTCATTTTTCACCTGTTTCTCATGCGGGGGTCTTTTGACGAGCTGCCGCGTCCTGGCGGGAGTGCTCAAGCAGGTTC‑TGCAAATAATGCAGCGTGACTGCAggg < 2:1028543/150‑1 (MQ=255) acaTCCCCAGACTCAAGGGTGCCTGCAACGGCGGGC‑TGGTTTATTTTCATTTTTCACCTGTTTCTCATGCGGGGGTCTTTTGACGAGCTGCCGCGTCCTGGCGGGAGTGCTCAAGCAGGTTC‑TGCAAATAATGCAGCGTGACTGCAGGGa < 1:1244513/150‑1 (MQ=255) cccAGACTCAAGGGTGCCTGCAACGGCGGGC‑TGGTTTATTTTCATTTTTCACCTGTTTCTCATGCGGGGGTCTTTTGACGAGCTGCCGCGTCCTGGCGGGAGTGCTCAAGCAGGTTC‑TGCAAATAATGCAGCGTGACTGCAGGGACCAgc < 1:2200201/150‑1 (MQ=255) tCAAGGGTGCCTGCAACGGCGGGC‑TGGTTTTTTTTTATTTTTTTCCTGTTTTTCCTGCGGGGGGGTTTTTACGAGCTGCCGCGTCCTGGCGGGGGGGGTCCAGCAGGGTT‑TTCCAAAAAAATAGCGCGGCTGCAGGGGGCCGCGGggcgg > 2:2905374/1‑149 (MQ=255) aaGGGTGCCTGCAACGGCGGGC‑TGGTTTATTTTCATTTTTCACCTGTTTCTCATGCGGGGGTCTTTTGACGAGCTGCCGCGTCCTGGCGGGAGTGCTCAAGCAGGTTC‑TGCAAATAATGCAGCGTGACTGCAGGGACCAGCGGCGCGATa < 2:3264060/150‑1 (MQ=255) aaGGGTGCCTGCAACGGCGGGC‑TGGTTTATTTTCATTTTTCACCTGTTTCTCATGCGGGGGTCTTTTGACGAGCTGCCGCGTCCTGGCGGGAGTGCTCAAGCAGGTTC‑TGCAAATAATGCAGCGTGACTGCAGGGACCAGCGGCGCGATa < 2:2496758/150‑1 (MQ=255) aGGGTGCCTGCAACGGCGGGC‑TGGTTTATTTTCATTTTTCACCTGTTTCTCATGCGGGGGTCTTTTGACGAGCTGCCGCGTCCTGGCGGGAGTGCTCAAGCAGGTTC‑TGCAAATAATGCAGCGTGACTGCAGGGACCAGCGGCGCGATAg < 1:15981/150‑1 (MQ=255) ggTGCCTGCAACGGCGGGC‑TGGTTTATTTTCATTTTTCACCTGTTTCTCATGCGGGGGTCTTTTGACGAGCTGCCGCGTCCTGGCGGGAGTGCTCAAGCAGGTTC‑TGCAAATAATGCAGCGTGACTGCAGGGACCAGCGGCGCGATAGcc < 2:305493/150‑1 (MQ=255) gCCTGCAACGGCGGGC‑TGGTTTATTTTCATTTTTCACCTGTTTCTCATGCGGGGGTCTTTTGACGAGCTGCCGCGTCCTGGCGGGAGTGCTCAAGCAGGTTC‑TGCAAATAATGCAGCGTGACTGCAGGGACCAGCGGCGCGATAGCCGTg < 2:2413350/150‑1 (MQ=255) cTGCAACGGCGGGC‑TGGTTTATTTTCATTTTTCACCTGTTTCTCATGCGGGGGTCTTTTGACGAGCTGCCGCGTCCTGGCGGGAGTGCTCAAGCAGGTTC‑TGCAAATAATGCAGCGTGACTGCAGGGACCAGCGGCGCGATAGCCGTgag < 1:955965/150‑1 (MQ=255) gCAACGGCGGGC‑TGGTTTATTTTCATTTTTCACCTGTTTCTCATGCGGGGGTCTTTTGACGAGCTGCCGCGTCCTGGCGGGAGTGCTCAAGCAGGTTC‑TGCAAATAATGCAGCGTGACTGCAGGGACCAGCGGCGCGATAGCCGTGAGAt < 1:2058522/150‑1 (MQ=255) cggcggGC‑TGGTTTATTTTCATTTTTCACCTGTTTCTCATGCGGGGGTCTTTTGACGAGCTGCCGCGTCCTGGCGGGAGTGCTCAAGCAGGTTC‑TGCAAATAATGCAGCGTGACTGCAGGGACCAGCGGCGCGATAGCCGTGAGATCGtt < 1:1264392/150‑1 (MQ=255) cggGC‑TGGTTTATTTTCATTTTTCACCTGTTTCTCATGCGGGGGTCTTTTGACGAGCTGCCGCGTCCTGGCGGGAGTGCTCAAGCAGGTTC‑TGCAAATAATGCAGCGTGACTGCAGGGACCAGCGGCGCGATAGCCGTGAGATCGttttt < 1:2258485/150‑1 (MQ=255) gggC‑TGGTTTATTTTCATTTTTCACCTGTTTCTCATGCGGGGGTCTTTTGACGAGCTGCCGCGTCCTGGCGGGAGTGCTCCAGCAGGTTC‑TGCAAATAATGCAGCGTGACTGCAGGGACCAGCGGCGCGATAGCCGTGAGATCGTTTTTc > 2:1874656/1‑150 (MQ=255) gggC‑TGGTTTATTTTCATTTTTCACCTGTTTCTCATGCGGGGGTCTTTTGACGAGCTGCCGCGTCCTGGCGGGAGTGCTCAAGCAGGTTC‑TGCAAATAATGCAGCGTGACTGCAGGGACCAGCGGCGCGATAGCCGTGAGATCGGTTTTc > 1:20056/1‑150 (MQ=255) gC‑TGGTTTATTTTCATTTTTCACCTGTTTCTCATGCGGGGGTCTTTTGACGAGCTGCCGCGTCCTGGCGGGAGTGCTCAAGCAGGTTC‑TGCAAATAATGCAGCGTGACTGCAGGGACCAGCGGCGCGATAGCCGTGAGATCGTTTTTCGc > 2:2325942/1‑150 (MQ=255) ggTTTATTTTCATTTTTCACCTGTTTCTCATGCGGGGGTCTTTTGACGAGCTGCCGCGTCCTGGCGGGAGTGCTCAAGCAGGTTC‑TGCAAATAATGCAGCGTGACTGCAGGGACCAGCGGCGCGATAGCCGTGAGATCGTTTTTCGCcag < 2:1349731/150‑1 (MQ=255) ggTTTATTTTCATTTTTCACCTGTTTCTCATGCGGGGGTCTTTTGACGAGCTGCCGCGTCCTGGCGGGAGTGCTCAAGCAGGTTC‑TGCAAATAATGCAGCGTGACTGCAGGGACCAGCGGCGCGATAGCCGTGAGATCGGTTTTCGCcag > 1:1455802/1‑150 (MQ=255) gTTTATTTTCATTTTTCACCTGTTTCTCATGCGGGGGTCTTTTGACGAGCTGCCGCGTCCTGGCGGGAGTGCTCAAGCAGGTTC‑TGCAAATAATGCAGCGTGACTGCAGGGACCAGCGGCGCGATAGCCGTGAGATCGTTTTTCGCcagc > 2:2219873/1‑150 (MQ=255) gTTTATTTTCATTTTTCACCTGTTTCTCATGCGGGGGTCTTTTGACGAGCTGCCGCGTCCTGGCGGGAGTGCTCAAGCAGGTTC‑TGCAAATAATGCAGCGTGACTGCAGGGACCAGCGGCGCGATAGCCGTGAGATCGTTTTTCGCcagc > 1:1858070/1‑150 (MQ=255) | CGAGAACGTCCAGAATGGTGGTGCGAATTGCATCGCCAAACTGTTTCTCAACGCTGCTATTGATTTGCAGGTCGATATCCTGCGTATCGAGTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGC‑TGGTTTATTTTCATTTTTCACCTGTTTCTCATGCGGGGGTCTTTTGACGAGCTGCCGCGTCCTGGCGGGAGTGCTCAAGCAGGTTC‑TGCAAATAATGCAGCGTGACTGCAGGGACCAGCGGCGCGATAGCCGTGAGATCGTTTTTCGCCAGC > AP012306/524140‑524437 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |