Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | AP012306 | 2,558,071 | 0 | A | C | 25.1% | 585.1 / 36.6 | 243 | V302G (GTA→GGA) | visC | predicted oxidoreductase, FAD/NAD(P)‑binding domain |
Reads supporting (aligned to +/- strand): ref base A (136/46); new base C (0/61); total (136/107) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 2.56e-28 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
Only 100 of 289 total aligned reads displayed.
CCTGCATACCAGCCAGCATCAACGCCGCACTGTGCTTGCGGCTACGCTCATAGCGACGCAGATAAATGTACTGCCCGATGTCTTTCCCCTGACGATGCAACCGTTT‑CAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGCTCTCAACCTTGCATAAGCCCAGGCGATTATCAAAA > AP012306/2557922‑2558220 | ccTGCATACCAGCCAGCATCAACGCCGCACTGTGCTTGCGGCTACGCTCATAGCGACGCAGATAAATGTACTGCCCGATGTCTTTCCCCTGACGATGCAACCGTTT‑CAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTa > 1:919182/1‑150 (MQ=255) ccTGCATACCAGCCAGCATCAACGCCGCACTGTGCTTGCGGCTACGCTCATAGCGACGCAGATAAATGTACTGCCCGATGTCTTTCCCCTGACGATGCAACCGTTT‑CAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTa < 1:2591391/150‑1 (MQ=255) tGCATACCAGCCAGCATCAACGCCGCACTGTGCTTGCGGCTACGCTCATAGCGACGCAGATAAATGTACTGCCCGATGTCTTTCCCCTGACGATGCAACCGTTT‑CAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTAcc > 2:3917885/1‑150 (MQ=255) tGCATACCAGCCAGCATCAACGCCGCACTGTGCTTGCGGCTACGCTCATAGCGACGCAGATAAATGTACTGCCCGATGTCTTTCCCCTGACGATGCAACCGTTT‑CAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGACTTAcc > 1:4041877/1‑150 (MQ=255) aTACCAGCCAGCATCAACGCCGCACTGTGCTTGCGGCTACGCTCATAGCGACGCAGATAAATGTACTGCCCGATGTCTTTCCCCTGACGATGCAACCGTTT‑CAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTAccccc > 1:1573370/1‑150 (MQ=255) ccagccagCATCAACGCCGCACTGTGCTTGCGGCTACGCTCATAGCGACTCAGATAAATGTACTGCCCGATGTCTTTCCCCTGACGATGCAACCGTTT‑CAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCTGc < 2:227001/150‑1 (MQ=255) ccagcATCAACGCCGCACTGTGCTTGCGGCTACGCTCATAGCGACGCAGATAAATGTACTGCCCGATGTCTTTCCCCTGACGATGCAACCGTTT‑CAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCTGCCCCg > 2:60652/1‑150 (MQ=255) cagcATCAACGCCGCACTGTGCTTGCGGCTACGCTCATAGCGACGCAGATAAATGTACTGCCCGATGTCTTTCCCCTGACGATGCAACCGTTT‑CAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCTGCCCCGc > 1:3351686/1‑150 (MQ=255) agcATCAACGCCGCACTGTGCTTGCGGCTACGCTCATAGCGACGCAGATAAATGTACTGCCCGATGTCTTTCCCCTGACGATGCAACCGTTT‑CAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCTGCCCCGcc > 2:9382/1‑150 (MQ=255) gcATCAACGCCGCACTGTGCTTGCGGCTACGCTCATAGCGACGCAGATAAATGTACTGCCCGATGTCTTTCCCCTGACGATGCAACCGTTT‑CAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCTGCCCCGCCa > 1:665372/1‑150 (MQ=255) gcATCAACGCCGCACTGTGCTTGCGGCTACGCTCATAGCGACGCAGATAAATGTACTGCCCGATGTCTTCCCCCTGACGATGCAACCGTTT‑CAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTCCCCCCTGCCCCGCCa < 2:3771864/150‑1 (MQ=255) aCGCCGCACTGTGCTTGCGGCTACGCTCATAGCGACGCAGATAAATGTACTGCCCGATGTCTTTCCCCTGACGATGCAACCGTTT‑CAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCTGCCCCGCCAGCGGGt > 2:2714209/1‑150 (MQ=255) cgccgcACTGTGCTTGCGGCTACGCTCATAGCGACGCAGATAAATGTACTGCCCGATGTCTTTCCCCTGACGATGCAACCGTTT‑CAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCTGCCCCGCCAGCGGGTg > 1:2435434/1‑150 (MQ=255) gccgcACTGTGCTTGCGGCTACGCTCATAGCGACGCAGATAAATGTACTGCCCGATGTCTTTCCCCTGACGATGCAACCGTTT‑CAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCTGCCCCGCCAGCGGGTGa < 1:1196406/150‑1 (MQ=255) gccccccTGTGCTTGCGGCTACGCTCATAGCGACGCAGATAAATGTCCTGCCCGATGTCTTCCCCCTGACGATGCACCCGTTT‑CATTTCGGCAACCAGCTCTGCAGCATCCAAAAAGCCGAGATTTCCCCCCTGCCCCGCCAGCGGGTGa < 2:3364070/144‑1 (MQ=255) cACTGTGCTTGCGGCTACGCTCATAGCGACGCAGATAAATGTACTGCCCGATGTCTTTCCCCTGACGATGCAACCGTTT‑CAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCTGCCCCGCCAGCGGGTGAATgg < 1:2956615/150‑1 (MQ=255) cTGTGCTTGCGGCTACGCTCATAGCGACGCAGATAAATGTACTGCCCGATGTCTTTCCCCTGACGATGCAACCGTTT‑CAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCTGCCCCGCCAGCGGGTGAATGGTa < 1:546683/150‑1 (MQ=255) cTGTGCTTGCGGCTACGCTCATAGCGACGCAGATAAATGTACTGCCCGATGTCTTTCCCCTGACGATGCAACCGTTT‑CAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCTGCCCCGCCAGCGGGTGAATGGTa > 1:3650215/1‑150 (MQ=255) tgtgCTTGCGGCTACGCTCATAGCGACGCAGATAAATGTACTGCCCGATGTCTTTCCCCTGACGATGCAACCGTTT‑CAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCTGCCCCGCCAGCGGGTGAATGGTAt > 1:2870854/1‑150 (MQ=255) gtgCTTGCGGCTACGCTCATAGCGACGCAGATAAATGTACTGCCCGATGGCTTTCCCCTGACGATGCAACCGTTT‑CAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCTGCCCCGCCAGCGGGGGAATGGTAtg > 2:1122839/1‑150 (MQ=255) cGGCTACGCTCATAGCGACGCAGATAAATGTACTGCCCGATGTCTTTCCCCTGACGATGCAACCGTTT‑CAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCTGCCCCGCCAGCGGGTGAATGGTATGTgcggcg > 1:3734959/1‑150 (MQ=255) gCTACGCTCATAGCGACGCAGATAAATGTACTGCCCGATGTCTTTCCCCTGACGATGCAACCGTTT‑CAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTc > 1:532790/1‑150 (MQ=255) cTACGCCCAAAGCGACGCAAATAAATGTCCGGCCCGATGTCTTCCCCCTGACGATGCACCCGTTT‑CAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTCCCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCg < 2:2231434/150‑1 (MQ=255) aCGCTCATAGCGACGCAGATAAATGTACTGCCCGATGTCTTTCCCCTGACGATGCAACCGTTT‑CAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGcc > 1:1973919/1‑150 (MQ=255) gCTCATAGCGACGCAGATAAATGTACTGCCCGATGTCTTTCCCCTGACGATGCAACCGTTT‑CAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCcca > 2:458798/1‑150 (MQ=255) gCTCATAGCGACGCAGATAAATGTACTCCCCGATGTCTTTCCCCTGACGATGAAACCGTTT‑CAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTCCCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCcca < 2:3971869/150‑1 (MQ=255) cTCATAGCGACGCAGATAAATGTACTGCCCGATGTCTTTCCCCTGACGATGCAACCGTTT‑CAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCccac > 2:2734411/1‑150 (MQ=255) cATAGCGACGCAGATAAATGTACTGCCCGATGTCTTTCCCCTGACGATGCAACCGTTT‑CAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTCCCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCccacca < 2:3583828/150‑1 (MQ=255) cATAGCGACGCAGATAAATGTACTGCCCGATGTCTTTCCCCTGACGATGCAACCGTTT‑CAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCccacca > 2:4046289/1‑150 (MQ=255) aTAGCGACGCAGATAAATGTACTGCCCGATGTCTTTCCCCTGACGATGCAACCGTTT‑CAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAg > 2:1546214/1‑150 (MQ=255) cGACGCAGATAAATGTACTGCCCGATGTCTTTCCCCTGACGATGCAACCGTTT‑CAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGcc > 1:464230/1‑150 (MQ=255) cGCAGATAAAGTTACTGCCCGATGTCTTCCCCCTGACGATGCAACCGTTT‑CAGTTCGGCAACCAGCTCTGCAGCATCCATAAAGCCGAGATTTCCCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGa < 2:106441/150‑1 (MQ=255) ccAGAGAATTTTACGGCCCGATGTTTTCCCCCGGACG‑TGCCACCCTTTCCGGTTCGCAAATCGGCTCTGCAGCACCCATAAAGCGGAGATTCCCCCCCGCCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGAc < 2:3019688/149‑1 (MQ=255) cAGATAAATGTACTGCCCGATGTCTTTCCCCTGACGATGCAACCGTTT‑CAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACg > 2:167207/1‑150 (MQ=255) aTAAATGTACTGCCCGATGTCTTTCCCCTGACGATGCAACCGTTT‑CAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTg > 1:3197768/1‑150 (MQ=255) aTAAATGTACTGCCCGATGTCTTTCCCCTGACGATGCAACCGTTT‑CAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTg > 1:252891/1‑150 (MQ=255) tAAATGTACTGCCGGATGTCTTTCCCCTGACGATGCACCCGTTT‑CAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTCCCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGc < 2:570207/150‑1 (MQ=255) tAAATGTACTGCCCGATGTCTTTCCCCTGACGATGCAACCGTTT‑CAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGc > 1:76640/1‑150 (MQ=255) tAAATGTACTGCCCGATGTCTTTCCCCTGACGATGCAACCGTTT‑CAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGc > 1:3794351/1‑150 (MQ=255) aaaTGTACTGCCCGATGTCTTTCCCCTGACGATGCAACCGTTT‑CAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTCCCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCg < 2:132928/150‑1 (MQ=255) aaaTGTACTGCCCGATGTCTTTCCCCTGACGATGCAACCGTTT‑CAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCg > 2:2840318/1‑150 (MQ=255) tGTACTGCCCGATGTCTTTCCCCTGACGATGCAACCGTTT‑CAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAgg < 1:3437650/150‑1 (MQ=255) gTACTGCCCGATGTCTTTCCCCTGACGATGCAACCGTTT‑CAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGc < 1:3132195/150‑1 (MQ=255) tACTGCCCGATGTCTTTCCCCTGACGATGCAACCGTTT‑CAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCa > 2:3081109/1‑150 (MQ=255) aCTGCCCGATGTCTTTCCCCTGACGATGCAACCGTTT‑CAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCaa > 1:2673581/1‑150 (MQ=255) cGATGTCTTTCCCCTGACGATGCAACCGTTT‑CAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGgc > 2:2902830/1‑150 (MQ=255) gATGTCTTTCCCCTGACGATGCAACCGTTT‑CAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGgcg > 1:620928/1‑150 (MQ=255) tCCCCTGAGGATGCAACCGTTT‑CAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTCCCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCATACGGTGCGAGGCAAACTGGCGCGCATAAc < 2:34425/150‑1 (MQ=255) cccTGACGATGCAACCGTTT‑CAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGc > 1:2211137/1‑150 (MQ=255) ccTGACGATGAACCCTTTT‑CAGTTCGGCAATCAGCTCTGCAGCATCCAAAAAGCCGAGATTTCCCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGcc < 2:2511193/150‑1 (MQ=255) gccGATGCACCCGTTT‑CAGTTCGCCAATCAGCTCTGCAGCACCCATAAAGCCGAGATTTACCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCg < 2:1751786/148‑1 (MQ=255) gACGATGCAACCGTTT‑CAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCg > 1:3864743/1‑150 (MQ=255) agATGCAACCGTTT‑CAGTGCGGTATTCAGCTCTGCGGCATCCATAAGGCCGAGATTTACCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTc < 2:1297055/149‑1 (MQ=255) gATGCAGCCGTTC‑CAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCa < 1:1446071/150‑1 (MQ=255) aTGCAACCGTTT‑CAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTCCCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAg < 1:3930244/150‑1 (MQ=255) aTGCAACCGTTT‑CAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAg > 2:1373455/1‑150 (MQ=255) gCAACCGTTC‑CAGTTCGGAAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTCCCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTg < 2:2568472/150‑1 (MQ=255) aCCGTTT‑CAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGa < 1:3502213/150‑1 (MQ=255) aCCGTTT‑CAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGa < 1:1673220/150‑1 (MQ=255) cGTTT‑CAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAac > 1:1925427/1‑150 (MQ=255) gTTT‑CAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAaca > 2:1218602/1‑150 (MQ=255) cGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGAcgcg > 2:4024125/1‑150 (MQ=255) aTCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGctc > 1:303740/1‑150 (MQ=255) ccagccttGCAGCATCCAAAAAGCCGAGATTTCCCCCCTCCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGctct < 2:216182/143‑1 (MQ=255) ccAGCTCTGCAGCATCAAAAAAGCCGAGATTTCCCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGctct < 2:2076894/149‑1 (MQ=255) cggCTCGGCAGCAGCCATAAAGCCGAGTTTTACCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGCtctc < 1:1772650/148‑1 (MQ=255) cAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCCAACTGGCGCGCCTAACGCCCCGTCAGTGGGTACACCTGACGCGCGCtctc > 1:2002984/1‑150 (MQ=255) aGCTCTGCGCCATCCATAAGGCCGAGATTTCCCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGCTCTCa < 2:2374046/150‑1 (MQ=255) gCTCGGCAGCATCCATAAAGCCGAGATTTCCCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGCTCTCaa < 1:2469793/150‑1 (MQ=255) ctGCAGCATCCATAAAGCCGAGATTTCCCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGCTCTCAACCt < 2:74798/150‑1 (MQ=255) gcagcaTCCATAAAGCGGAGATTTCCCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGCTCTCAACCTTg < 1:1896061/150‑1 (MQ=255) cagcaTCCATAAAGCCGAGATTTACCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGCTCTCAACCTTGc > 1:41313/1‑150 (MQ=255) cagcaCCCAAAAAGCCGAGATTTCCCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGCTCTCAACCTTGc < 2:2105128/150‑1 (MQ=255) agcaCCAATAAAGCCGAGATTCCCCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGCTCTCAACCTTGCa < 2:3180768/150‑1 (MQ=255) cacccATAAAGCCGAGTTTTCCCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGCTCTCAACCTTGCATa < 1:214381/147‑1 (MQ=255) caTCCATAAAGCCGAGATTTACCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGCTCTCAACCTTGCATa > 1:1248833/1‑150 (MQ=255) caTCCATAAAGCCGAGATTTACCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGCTCTCAACCTTGCATa > 2:3287/1‑150 (MQ=255) accaaaaaaGCCGAGTTTCCCCCCCTCCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGCTCTCAACCTTGCATaa < 2:4106673/144‑1 (MQ=255) aTCCATAAAGCCGAGATTTACCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGCTCTCAACCTTGCATaa < 1:3560627/150‑1 (MQ=255) cATAAAGCCGAGATTTACCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGCTCTCAACCTTGCATAAGcc < 1:3830439/150‑1 (MQ=255) cATAAAGCCGAGATTTACCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGCTCTCAACCTTGCATAAGcc < 1:2189357/150‑1 (MQ=255) tAAAGCCGAGATTTACCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGCTCTCAACCTTGCATAAGCCCa < 1:3697577/150‑1 (MQ=255) aaaaGCCGAGATTTCCCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGCTCTCAACCTTGCATAAGCCCa < 2:3050199/149‑1 (MQ=255) aaaGCCGAGATTTACCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGCTCTCAACCTTGCATAAGCCCAg > 1:1308575/1‑150 (MQ=255) gCCGAGATTTACCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGCTCTCAACCTTGCATAAGCCCAGGCg > 2:1488844/1‑150 (MQ=255) cccGAGATTTCCCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGCTCTCAACCTTGCATAAGCCCAGGCg < 2:3389725/149‑1 (MQ=255) ccGAGATTTCCCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGCTCTCAACCTTGCATAAGCCCAGGCGa < 1:3373378/150‑1 (MQ=255) cGATATTTCCCCCCGCCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGCTCTCAACCTTGCATAAGCCCAGGCGAt < 2:1934465/150‑1 (MQ=255) cGAGATTTCCCCCCGGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGCTCTCAACCTTGCATAAGCCCAGGCGAt < 2:772913/150‑1 (MQ=255) cGAGATTTACCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGCTCTCAACCTTGCATAAGCCCAGGCGAt < 1:1382580/150‑1 (MQ=255) gagtTTTCCCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGCTCTCAACCTTGCATAAGCCCAGGCGAtt < 2:3651366/150‑1 (MQ=255) gagaTTTCCCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGCTCTCAACCTTGCATAAGCCCAGGCGAtt < 2:3515173/150‑1 (MQ=255) gagaTTTACCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGCTCTCAACCTTGCATAAGCCCAGGCGAtt > 1:3474902/1‑150 (MQ=255) agaTTTCCCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGCTCTCAACCTTGCATAAGCCCAGGCGATTa < 2:1413159/150‑1 (MQ=255) agaTTTACCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGCTCTCAACCTTGCATAAGCCCAGGCGATTa < 1:327149/150‑1 (MQ=255) agaTTTACCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGCTCTCAACCTTGCATAAGCCCAGGCGATTa > 1:310582/1‑150 (MQ=255) gaTTTACCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGCTCTCAACCTTGCATAAGCCCAGGCGATTAt > 1:1143773/1‑150 (MQ=255) aTTTCCCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGCTCTCAACCTTGCATAAGCCCAGGCGATTATc < 2:682156/150‑1 (MQ=255) tttCCCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGCTCTCAACCTTGCATAAGCCCAGGCGATTATCa < 2:2626101/150‑1 (MQ=255) tttCCCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGCTCTCAACCTTGCATAAGCCCAGGCGATTATCa < 1:1022602/150‑1 (MQ=255) | CCTGCATACCAGCCAGCATCAACGCCGCACTGTGCTTGCGGCTACGCTCATAGCGACGCAGATAAATGTACTGCCCGATGTCTTTCCCCTGACGATGCAACCGTTT‑CAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCTGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGCTCTCAACCTTGCATAAGCCCAGGCGATTATCAAAA > AP012306/2557922‑2558220 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |