Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*AP0123062,857,9110AC22.2% 523.8 / 12.5 189K180N (AAA→AACaaeRpredicted DNA‑binding transcriptional regulator, efflux system
Reads supporting (aligned to +/- strand):  ref base A (122/25);  new base C (0/42);  total (122/67)
Fisher's exact test for biased strand distribution p-value = 7.97e-25
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 237 total aligned reads displayed.

GCCCCCGACCTGATTGCCGACGGTCTGGATGTGGTGATCCGCGTCGGCGCGTTGCAGGATTCCAGCCTGTTTTCCCGCCGTCTGGGCGCGATGCCAATGGTGGTGTGCGCCGCGAAAAGCTATCTCACACAATACGGCATACCGGAAAAACCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTGAACTGATCGCACCGGAAGGGATCTCGACTCGCCTGATCCCACAAGGAAGATTTGTGACTAATGATCCGATGACGCTGGTGCGCTGGCT  >  AP012306/2857762‑2858060
                                                                                                                                                      |                                                                                                                                                       
 ccccgGACCTGATTGCCGACGGTCTGGATGTGGTGATCCGCGTCGGCGCGTTGCAGGATTCCAGCCTGTTTTCCCGCCGTCTGGGCGCGATGCCAATGGTGGTGTGCGCCGCGAAAAGCTATCTCACACAATACGGCATACCGGAAAAAc                                                                                                                                                       <  1:4109489/150‑1 (MQ=255)
   cccGACCTGATTGCCGACGGTCTGGATGTGGTGATCCGCGTCGGCGCGTTGCAGGATTCCAGCCTGTTTTCCCGCCGTCTGGGCGCGATGCCAATGGTGGTGTGCGCCGCGAAAAGCTATCTCACACAATACGGCATACCGGAAAAAccc                                                                                                                                                    >  1:1208128/1‑150 (MQ=255)
     cGACCTGATTGCCGACGGTCTGGATGTGGTGATCCGCGTCGGCGCGTTGCAGGATTCCAGCCTGTTTTCCCGCCGTCTGGGCGCGATGCCAATGGTGGTGTGCGCCGCGAAAAGCTATCTCACACAATACGGCATACCGGAAAAACccgc                                                                                                                                                  <  2:1776355/150‑1 (MQ=255)
       aCCTGATTGCCGACGGTCTGGATGTGGTGATCCGCGTCGGCGCGTTGCAGGATTCCAGCCTGTTTTCCCGCCGTCTGGGCGCGATGCCAATGGTGGTGTGCGCCGCGAAAAGCTATCTCACACAATACGGCATACCGGAAAAACccgccg                                                                                                                                                >  1:3263706/1‑150 (MQ=255)
         cTGATTGCCGACGGTCTGGATGTGGTGATCCGCGTCGGCGCGTTGCAGGATTCCAGCCTGTTTTCCCGCCGTCTGGGCGCGATGCCAATGGTGGTGTGCGCCGCGAAAAGCTATCTCACACAATACGGCATACCGGAAAAACCCGCCGAt                                                                                                                                              >  1:3743848/1‑150 (MQ=255)
         cTGATTGCCGACGGTCTGGATGTGGTGATCCGCGTCGGCGCGTTGCAGGATTCCAGCCTGTTTTCCCGCCGTCTGGGCGCGATGCCAATGGTGGTGTGCGCCGCGAAAAGCTATCTCACACAATACGGCATACCGGAAAAACCCGCCGAt                                                                                                                                              >  1:1020380/1‑150 (MQ=255)
               gCCGACGGTCTGGATGTGGTGATCCGCGTCGGCGCGTTGCAGGATTCCAGCCTGTTTTCCCGCCGTCTGGGCGCGATGCCAATGGTGGTGTGCGCCGCGAAAAGCTATCTCACACAATACGGCATACCGGAAAAACCCGCCGATTTGagt                                                                                                                                        >  1:1346473/1‑150 (MQ=255)
                     gttCTGGGTGGGGTGCCCCGCGGCGGCGCGTCACAGGTTCCCAGCCTTTTCCCCCGCCGTCTGGGCGCGATCAAAAGGGTGGTGTGCCCCGCGAAAAGTTATCCCCCAAAACAGGGCATACCGAAAAACCCCGCCGATTTGAGTAGtcat                                                                                                                                  <  2:2678181/148‑1 (MQ=255)
                     ggTCTGGATGTGGTGATCCGCGTCGGCGCGTTGCAGGATTCCAGCCTGTTTTCCCGCCGTCTGGGCGCGATGCCAATGGTGGTGTGCGCCGCGAAAAGCTATCTCACACAATACGGCATACCGGAAAAACCCGCCGATTTGAGTAGtcat                                                                                                                                  >  2:2882316/1‑150 (MQ=255)
                       tCTGGATGTGGTGATCCGGGTCGGCGCGTTGCAGGATCCCGGCTTGTTTCCCCGCCGTCGGGGCGCGATGCCAATGGTGGTGTGCGCCGCAAAAAGCTATCTCCCACAATCCGGCATCCCGAAAAACCCCGCCGATTTGAGTAGtcattc                                                                                                                                <  2:3197507/150‑1 (MQ=255)
                          ggATGGGGTGATCCGCGTCGGCGCGTTGCAGGATTCCAGCCTGTTTTCCCGCCGTCTGGGCGCGATGCCAATGGTGGTGTGCGCCGCGAAAAGCTATCTCACACAATACGGCATACCGGAAAAACCCGCCGATTTGAGTAGTCATTCATg                                                                                                                             >  2:1618775/1‑150 (MQ=255)
                           gATGTGGTGATCCGCGTCGGCGCGTTGCAGGATTCCAGCCTGTTTTCCCGCCGTCTGGGCGCGATGCCAATGGTGGTGTGCGCCGCGAAAAGCTATCTCACACAATACGGCATACCGGAAAAAACCGCCGATTTGAGTAGTCATTCATgg                                                                                                                            >  2:646780/1‑150 (MQ=255)
                            aTGTGGTGATCCGCGTCGGCGCGTCGCAGGATTCCAGCCTGTTTTCCCGCCGTCTGGGCGCGATGCCAATGGTGGTGTGCGCCGCGAAAAGCTATCTCACACAATACGGCATACCGGAAAAACCCGCCGATTTGAGTAGTCATTCATGGc                                                                                                                           >  2:192071/1‑150 (MQ=255)
                                ggtgATCCGCGTCGGCGCGTTGAAGGATTCCAGCCTGTTTTCCCGCCGTCTGGGCGCGATGCCAATGGTGGTGTGCGCCGCGAAAAGCTATCTCACACAATACGGCATACCGGAAAAACCCGCCGATTTGAGTAGTCATTCATGGCTTGa                                                                                                                       >  2:2619465/1‑150 (MQ=255)
                                   gATCCGCGTCGGCGCGTTGCAGGATTCCAGCCTGTTTTCCCGCCGTCTGGGCGCGATGCCAATGGTGGTGTGCGCCGCGAAAAGCTATCTCACACAATACGGCATACCGGAAAAACCCGCCGATTTGAGTAGTCATTCATGGCTTGAATa                                                                                                                    >  2:1517634/1‑150 (MQ=255)
                                             ggCGCGTTGCAGGATTCCAGCCTGTTTTCCCGCCGTCTGGGCGCGATGCCAATGGTGGTGTGCGCCGCGAAAAGCTATCTCACACAATACGGCATACCGGAAAAACCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCgg                                                                                                          >  2:1604669/1‑150 (MQ=255)
                                               ggggTTGCAGGTTTCCGGCCTTTTTCCCCGCCGTCTGGGCGCGATGCCAATGGTGGTGTGCGCCGCGAAAAGCTATCTCACACAATAGGGCATACCGAAAAACCCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGcc                                                                                                        <  2:1434597/147‑1 (MQ=255)
                                               cgcgTTGCAGGATTCCAGCCTGTTTTCCCGCCGTCTGGGCGCGATGCCAATGGTGGTGTGCGCCGCGAAAAGCTATCTCACACAATACGGCATACCGGAAAAACCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGcc                                                                                                        >  2:2706518/1‑150 (MQ=255)
                                                gcgTTGCAGGTTCCCAGCCTGTTTCCCCGCCGTCGGGGCGCGATGCCAAGGGTGGTGTGCGCCGCGAAAATCTATCTCACACAATGCGGCATCCCGAAAAACCCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGccc                                                                                                       <  2:2208857/150‑1 (MQ=255)
                                                 cgTTGCAGGATTCCAGCCTGTTTTCCCGCCGTCTGGGCGCGATGCCAATGGTGGTGTGCGCCGCGAAAAGCTATCTCACACAATACGGCATACCGGAAAAACCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCg                                                                                                      >  2:748264/1‑150 (MQ=255)
                                                    tGCAGGATTCCAGCCTGTTTTCCCGCCGTCTGGGCGCGATGCCAATGGTGGTGTGCGCCGCGAAAAGCTATCTCACACAATACGGCATACCGGAAAAACCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACa                                                                                                   >  1:2061664/1‑150 (MQ=255)
                                                     gCAGGATTCCAGCCTGTTTTCCCGCCGTCTGGGCGCGATGCCAATGGTGGTGTGCGCCGCGAAAAGCTATCTCACACAATACGGCATACCGGAAAAACCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACaa                                                                                                  >  1:1749078/1‑150 (MQ=255)
                                                      cAGGATTCCAGCCTGTTTTCCCGCCGTCTGGGCGCGATGCCAATGGTGGTGTGCGCCGCGAAAAGCTATCTCACACAATACGGCATACCGGAAAAACCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAAt                                                                                                 >  1:3689939/1‑150 (MQ=255)
                                                      cAGGATTCCAGCCTGTTTTCCCGCCGTCTGGGCGCGATGCCAATGGTGGTGTGCGCCGCGAAAAGCTATCTCACACAATACGGCATACCGGAAAAACCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAAt                                                                                                 >  1:1448268/1‑150 (MQ=255)
                                                        ggATTCCAGCCTGTTTTCCCGCCGTCTGGGCGCGATGCCAATGGTGGTGTGCGCCGCGAAAAGCTATCTCACACAATACGGCATACCGGAAAAACCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGa                                                                                               >  2:1688749/1‑150 (MQ=255)
                                                         gttcccAGCCTGTTTCCCCCCCGTCGGGGCGCGATGCAAAGGGGGGTGTGCGCCGCAAAAAGCTATCCCACAAAATCCGGCAACCGGAAAAACCCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGaa                                                                                              <  2:1724390/146‑1 (MQ=255)
                                                           ttCCAGCCTGTTTTCCCGCCGTCTGGGCGCGATGCCAATGGTGGTGTGCGCCGCGAAAAGCTATCTCACACAATACGGCATACCGGAAAAACCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAAtt                                                                                            >  1:1171060/1‑150 (MQ=255)
                                                             ccAGCCTGTTTTCCCGCCGTCTGGGCGCGATGCCAATGGTGGTGTGCGCCGCGAAAAGCTATCTCACACAATACGGCATACCGGAAAAACCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTg                                                                                          >  1:2464088/1‑150 (MQ=255)
                                                             ccAGCCTGTTTTCCCGCCGTCTGGGCGCGATGCCAATGGTGGTGTGCGCCGCGAAAAGCTATCTCACACAATACGGCATACCGGAAAAACCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTg                                                                                          >  1:1631084/1‑150 (MQ=255)
                                                                gcttGTTTCCCCGCCGTCGGGGCGCGATGACAATGGTGGTGGGCGCCGCAAAAAGTTATCTCACAAAATCCGGCATACGGAAAAACCCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTGAAc                                                                                       <  2:1093932/147‑1 (MQ=255)
                                                                  cTGTTTTCCCGCCGTCTGGGCGCGATGCCAATGGTGGTGTGCGCCGCGAAAAGCTATCTCACACAATACGGCATACCGGAAAAACCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTGAACTg                                                                                     >  2:2283773/1‑150 (MQ=255)
                                                                   tGTTTTCCCGCCGTCTGGGCGCGATGCCAATGGTGGTGTGCGCCGCGAAAAGCTATCTCACACAATACGGCATACCGGAAAAACCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTGAACTGa                                                                                    >  1:3964602/1‑150 (MQ=255)
                                                                    gTTTCCCCGCCGTCTGGGCGCGATGCAAATGGTGGTGTGCGCCGCGAAAAGCTATCTCACACAATACGGCATCCCGAAAAAACCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTGAACTGAt                                                                                   <  1:2227353/150‑1 (MQ=255)
                                                                          cccccgTCTGGGCGGGATGCAAAGGGGGGTGTGCCCCGAAAAAACCTATCCCCCAAAATACGGCATCCGGAAAAACCCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTGAACTGATCGCAcc                                                                             <  2:3490154/147‑1 (MQ=255)
                                                                               gTCTGGGCGCGATGCCAATGGTGGTGTGCGCCGCGAAAAGCTATCTCACACAATACGGCATACCGGAAAAACCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTGAACTGATCGCACCGGAAg                                                                        >  1:1041261/1‑150 (MQ=255)
                                                                                gcggggCGGGATCCAATGGGGGTTGCGCGCCGAAAAAACTTTCCCCACACACTGCGGCAGACGGAAAAACCCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTGAACTGATCGCACCGGAAgg                                                                       <  2:867995/147‑1 (MQ=255)
                                                                                    ggCGCGATGCCAAGGGTGGTGTGCGCCGCAAAAAGCTATCTCACACAATACGGCATACCGGAAAACCCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTGAACTGATCGCACCGGAAGGGAtc                                                                   <  1:2755132/150‑1 (MQ=255)
                                                                                      ggcgATGCCAATGGTGGTGGGCGCCGGAAAAAGCTATCTCACACAATCCGGCATACCGAAAAACCCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTGAACTGATCGCACCGGAAGGGAtctc                                                                 <  1:614843/149‑1 (MQ=255)
                                                                                       gcgATGCCAATGGTGGTGTGCGCCGCGAAAAGCTATCTCACACAATACGGCATACCGGAAAAACCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTGAACTGATCGCACCGGAAGGGATCTCg                                                                >  1:231177/1‑150 (MQ=255)
                                                                                          aTGCCAATGGTGGGGTGCGCCGCAAAAAGCTATCTCACAAAATACGGCATCCCGAAAAACCCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTGAACTGATCGCACCGGAAGGGATCTCGACt                                                             <  1:3652586/150‑1 (MQ=255)
                                                                                              catgggtggtGTGCGCGGCAAAAAGCTATCTCACACAATACGGCATACCGAAAAACCCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTGAACTGATCGCACCGGAAGGGATCTCGACTCGcc                                                         <  1:1874476/146‑1 (MQ=255)
                                                                                              cAATGGTGGTGTGCGCCGCGAAAAGCTATCTCACACAATACGGCATACCGGAAAAACCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTGAACTGATCGCACCGGAAGGGATCTCGACTCGcc                                                         >  1:3616155/1‑150 (MQ=255)
                                                                                               agtggtggTGTGCGCCGAGAAAACCTACCTCACAAAATACGACATCCCGAAAAACCCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTGAACTGATCGCACCGGAAGGGATCTCGACTCGCCt                                                        <  2:1578403/148‑1 (MQ=255)
                                                                                                 tggtggTGTGCGCCGCGAAAAGCTATCTCACACAATACGGCATACCGGAAAAACCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTGAACTGATCGCACCGGAAGGGATCTCGACTCGCCTGa                                                      >  1:1132040/1‑150 (MQ=255)
                                                                                                 tggtggTGTGCCCCGAGAAAAGCTATCTCACACAATACGGCATACCGAAAAAACCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTGAACTGATCGCACCGGAAGGGATCTCGACTCGCCTGa                                                      <  1:3483537/150‑1 (MQ=255)
                                                                                                 ggggggtgTGCGCCGAAAAAAGCTATCTCACACAATACGGCATCCCGAAAAACCCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTGAACTGATCGCACCGGAAGGGATCTCGACTCGCCTGa                                                      <  2:3719946/146‑1 (MQ=255)
                                                                                                  ggtggtGTGCGCCGCGAAAAGCTATCTCACACAATACGGCATACCGGAAAAACCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTGAACTGATCGCACCGGAAGGGATCTCGACTCGCCTGAt                                                     >  1:1300255/1‑150 (MQ=255)
                                                                                                  ggtggtGTGCGCCGCGAAAAGCTATCTCACACAATACGGCATACCGGAAAAACCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTGAACTGATCGCACCGGAAGGGATCTCGACTCGCCTGAt                                                     >  1:3431307/1‑150 (MQ=255)
                                                                                                   gtggtgTGCGCGGCGAAAAGCTATCTAACACAATCCGCCATACCGAAAAAACCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTGAACTGATCGCACCGGAAGGGATCTCGACTCGCCTGATc                                                    <  1:802757/150‑1 (MQ=255)
                                                                                                   gtggtgTGCGCCGCGAAAAGCTATCTCACACAATACGGCATACCGGAAAAACCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTGAACTGATCGCACCGGAAGGGATCTCGACTCGCCTGATc                                                    >  2:1448207/1‑150 (MQ=255)
                                                                                                   gtggtgTGCGCCGCGAAAAGCTATCTCACACAATACGGCATACCGGAAAAACCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTGAACTGATCGCACCGGAAGGGATCTCGACTCGCCTGATc                                                    >  2:3371415/1‑150 (MQ=255)
                                                                                                    tggtgTGCGCCGCGAAAAGCTATCTCACACAATACGGCATCCGGAAAAACCCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTGAACTGATCGCACCGGAAGGGATCTCGACTCGCCTGATcc                                                   <  1:763403/150‑1 (MQ=255)
                                                                                                    tggtgTGCGCCGCAAAAAGCTATCTCACACAATACGGCATACCGAAAAACCCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTGAACTGATCGCACCGGAAGGGATCTCGACTCGCCTGATcc                                                   <  1:499548/150‑1 (MQ=255)
                                                                                                      gtgtGCGCCGCGAAAAGCTATCTCACACAATACGGCATACCGGAAAAACCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTGAACTGATCGCACCGGAAGGGATCTCGACTCGCCTGATCCca                                                 >  2:3884001/1‑150 (MQ=255)
                                                                                                      gtgaGCGCGGCGAAGATCTTTCTCAAACAAGCCGAACTAACAAAAACACCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTGAACTGATCGCACCGGAAGGGATCTCGACTCGCCTGATCCca                                                 <  2:1427570/150‑1 (MQ=255)
                                                                                                        tgtgCGCCGCGAAAAGCTATCTCACACAATACGGCATACCGGAAAAACCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTGAACTGATCGCACCGGAAGGGATCTCGACTCGCCTGATCCcac                                                >  1:3178315/1‑150 (MQ=255)
                                                                                                         gtgCGCCGCGAAAAGCTATCTCACACAATACGGCATACCGGAAAAACCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTGAACTGATCGCACCGGAAGGGATCTCGACTCGCCTGATCCcaca                                               >  2:494050/1‑150 (MQ=255)
                                                                                                         gtgCGCCGCAAAAAGCTATCTCACAAAATACGGCATACCGAAAAAACCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTGAACTGATCGCACCGGAAGGGATCTCGACTCGCCTGATCCcaca                                               <  1:3940911/150‑1 (MQ=255)
                                                                                                            cgaggtgAAAGGCTATCCCACCGAACAGGGCATCGGGAAAAAGCCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTGAACTGATCGCACCGGAAGGGATCTCGACTCGCCTGATCCCACAAgg                                            <  1:132915/144‑1 (MQ=255)
                                                                                                              ccggaaaaaGTTATCCCACAAAATGCGGCATCCCGGAAAACCCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTGAACTGATCGCACCGGAAGGGATCTCGACTCGCCTGATCCCACAAGGaa                                          <  1:1070147/145‑1 (MQ=255)
                                                                                                              ccgaaaaaaGCTACCTCACACAATACGGCATACCGGAAAACCCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTGAACTGATCGCACCGGAAGGGATCTCGACTCGCCTGATCCCACAAGGaa                                          <  2:1299390/145‑1 (MQ=255)
                                                                                                                   aaaaGCTATCACACACAATACGGCATACCGAAAAACCCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTGAACTGATCGCACCGGAAGGGATCTCGACTCGCCTGATCCCACAAGGAAGAttt                                     <  1:877193/150‑1 (MQ=255)
                                                                                                                       gCTATCTCACACAATACGGCATACCGGAAAAACCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTGAACTGATCGCACCGGAAGGGATCTCGACTCGCCTGATCCCACAAGGAAGATTTGTGa                                 >  2:3795394/1‑150 (MQ=255)
                                                                                                                          accccacacaATCCGGCATCCGGAAAAACCCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTGAACTGATCGCACCGGAAGGGATCTCGACTCGCCTGATCCCACAAGGAAGATTTGTGACTa                              <  1:3045939/146‑1 (MQ=255)
                                                                                                                          aTCTCACACAATACGGCATACCGGAAAAACCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTGAACTGATCGCACCGGAAGGGATCTCGACTCGCCTGATCCCACAAGGAAGATTTGTGACTa                              >  2:1999849/1‑150 (MQ=255)
                                                                                                                          aTCTCACACAATACGGCATACCGGAAAAACCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTGAACTGATCGCACCGGAAGGGATCTCGACTCGCCTGATCCCACAAGGAAGATTTGTGACTa                              >  1:2344315/1‑150 (MQ=255)
                                                                                                                           tctcACACAATACGGCATACCGGAAAAACCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTGAACTGATCGCACCGGAAGGGATCTCGACTCGCCTGATCCCACAAGGAAGATTTGTGACTaa                             >  2:201103/1‑150 (MQ=255)
                                                                                                                           tctcACACAATACGGAATACGGAAAAACCCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTGAACTGATCGCACCGGAAGGGATCTCGACTCGCCTGATCCCACAAGGAAGATTTGTGACTaa                             <  1:2702544/150‑1 (MQ=255)
                                                                                                                           tctcACACAACCGGGCACACGGAAAAACCCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTGAACTGATCGCACCGGAAGGGATCTCGACTCGCCTGATCCCACAAGGAAGATTTGTGACTaa                             <  1:4095189/150‑1 (MQ=255)
                                                                                                                            ctcACACAATGCGCCATACCGAAAAAACCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTGAACTGATCGCACCGGAAGGGATCTAGACTCGCCTGATCCCACAAGGAAGATTTGTGACTAAt                            <  1:2645700/150‑1 (MQ=255)
                                                                                                                             tcACACAATACGGCATACCGGAAAAACCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTGAACTGATCGCACCGGAAGGGATCTCGACTCGCCTGATCCCACAAGGAAGATTTGTGACTAATg                           >  1:3860974/1‑150 (MQ=255)
                                                                                                                             tcACACAATACGGCATACCGGAAAAACCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTGAACTGATCGCACCGGAAGGGATCTCGACTCGCCTGATCCCACAAGGAAGATTTGTGACTAATg                           >  1:3223571/1‑150 (MQ=255)
                                                                                                                                 acaATACGGCATACCGGAAAACCCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTGAACTGATCGCACCGGAAGGGATCTCGACTCGCCTGATCCCACAAGGAAGATTTGTGACTAATGATcc                       <  1:1426412/150‑1 (MQ=255)
                                                                                                                                 acaATACGGCATACCGGAAAAACCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTGAACTGATCGCACCGGAAGGGATCTCGACTCGCCTGATCCCACAAGGAAGATTTGTGACTAATGATcc                       >  2:3523317/1‑150 (MQ=255)
                                                                                                                                 aaaaTACGCCATACGGAAAAACCCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTGAACTGATCGCACCGGAAGGGATCTCGACTCGCCTGATCCCACAAGGAAGATTTGTGACTAATGATcc                       <  2:1819605/148‑1 (MQ=255)
                                                                                                                                  caATACGGCATACCGGAAAAACCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTGAACTGATCGCACCGGAAGGGATCTCGACTCGCCTGATCCCACAAGGAAGATTTGTGACTAATGATCCg                      >  1:3513496/1‑150 (MQ=255)
                                                                                                                                  caATACGGCATACCGAAAAACCCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTGAACTGATCGCACCGGAAGGGATCTCGACTCGCCTGATCCCACAAGGAAGATTTGTGACTAATGATCCg                      <  1:2933584/150‑1 (MQ=255)
                                                                                                                                  aaaTACGGCATACCGAAAAACCCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTGAACTGATCGCACCGGAAGGGATCTCGACTCGCCTGATCCCACAAGGAAGATTTGTGACTAATGATCCg                      <  2:1133627/149‑1 (MQ=255)
                                                                                                                                      ccGGCATACGGAAAAACCCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTGAACTGATCGCACCGGAAGGGATCTCGACTCGCCTGATCCCACAAGGAAGATTTGTGACTAATGATCCGATGa                  <  1:2428245/149‑1 (MQ=255)
                                                                                                                                      aCGGCATACCGAAAAACCCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTGAACTGATCGCACCGGAAGGGATCTTGACTCGCCTGATCCCACAAGGAAGATTTGTGACTAATGATCCGATGa                  <  1:401178/150‑1 (MQ=255)
                                                                                                                                      aCGGCATACCGAAAAACCCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTGAACTGATCGCACCGGAAGGGATCTCGACTCGCCTGATCCCACAAGGAAGATTTGTGACTAATGATCCGATGa                  <  2:1205096/150‑1 (MQ=255)
                                                                                                                                        ggCATACCGGAAAAACCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTGAACTGATCGCACCGGAAGGGATCTCGACTCGCCTGATCCCACAAGGAAGATTTGTGACTAATGATCCGATGACg                >  2:3977733/1‑150 (MQ=255)
                                                                                                                                          cATACCGGAAAAACCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGGGCGGCCCGACAATGAATTTGAACTGATCGCACCGGAAGGGATCTCGACTCGCCTGATCCCACAAGGAAGATTTGTGACTAATGATCCGATGACGCt              >  2:3161550/1‑150 (MQ=255)
                                                                                                                                           aTACCGGAAAACCCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTGAACTGATCGCACCGGAAGGGATCTCGACTCGCCTGATCCCACAAGGAAGATTTGTGACTAATGATCCGATGACGCTg             <  1:3590041/150‑1 (MQ=255)
                                                                                                                                            tACCGAAAAACCCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTGAACTGATCGCACCGGAAGGGATCTCGACTCGCCTGATCCCACAAGGAAGATTTGTGACTAATGATCCGATGACGCTgg            <  1:716321/150‑1 (MQ=255)
                                                                                                                                             gcctgAAAAACTCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTGAACTGATCGCACCGGAAGGGATCTCGACTCGCCTGATCCCACAAGGAAGATTTGTGACTAATGATCCGATGACGCTgg            <  1:958283/146‑1 (MQ=255)
                                                                                                                                             aCCGGAAAAACCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTGAACTGATCGCACCGGAAGGGATCTCGACTCGCCTGATCCCACAAGGAAGATTTGTGACTAATGATCCGATGACGCTGGt           >  2:2919240/1‑150 (MQ=255)
                                                                                                                                             aCCGGAAAAACCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTGAACTGATCGCACCGGAAGGGATCTCGACTCGCCTGATCCCACAAGGAAGATTTGTGACTAATGATCCGATGACGCTGGt           >  1:1788693/1‑150 (MQ=255)
                                                                                                                                             aCCGGAAAAACCCGCCGATTTGAGTAGTCATTCATGGCTTGAAAACAGCGTGCCGCCCGACAATGAATTTGAACTGATCGCACCGGAAGGGATCTCGAGTCGCCTGATCCCAAAAGGAAGATTTGTGACTAATGATCCGATGACGCTGGt           >  2:3480678/1‑150 (MQ=255)
                                                                                                                                               cgaaaaacCCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTGAACTGATCGCACCGGAAGGGATCTCGACTCGCCTGATCCCACAAGGAAGATTTGTGACTAATGATCCGATGACGCTGGTgc         <  2:2124452/147‑1 (MQ=255)
                                                                                                                                                ggAAAAACCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTGAACTGATCGCACCGGAAGGGATCTCGACTCGCCTGATCCCACAAGGAAGATTTGTGACTAATGATCCGATGACGCTGGTgcg        >  1:1714823/1‑150 (MQ=255)
                                                                                                                                                ggAAAAACCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTGAACTGATCGCACCGGAAGGGATCTCGACTCGCCTGATCCCACAAGGAAGATTTGTGACTAATGATCCGATGACGCTGGTgcg        >  1:1999927/1‑150 (MQ=255)
                                                                                                                                                aaaaaatCCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTGAACTGATCGCACCGGAAGGGATCTCGACTCGCCTGATCCCACAAGGAAGATTTGTGACTAATGATCCGATGACGCTGGTgcg        <  2:3631817/148‑1 (MQ=255)
                                                                                                                                                 gAAAAACCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTGAACTGATCGCACCGGAAGGGATCTCGACTCGCCTGATCCCACAAGGAAGATTTGTGACTAATTATCCGATGACGCTGGTgcgc       >  2:2302765/1‑150 (MQ=255)
                                                                                                                                                  aaaaaCCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTGAACTGATCGCACCGGAAGGGATCTCGACTCGCCTGATCCCACAAGGAAGATTTGTGACTAATGATCCGATGACGCTGGTGCgct      >  1:2523689/1‑150 (MQ=255)
                                                                                                                                                  aaaaaCCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTGAACTGATCGCACCGGAAGGGATCTCGACTCGCCTGATCCCACAAGGAAGATTTGTGACTAATGATCCGATGACGCTGGTGCgct      >  1:2976998/1‑150 (MQ=255)
                                                                                                                                                  aaaaaCCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTGAACTGATCGCACCGGAAGGGATCTCGACTCGCCTGATCCCACAAGGAAGATTTGTGACTAATGATCCGATGACGCTGGTGCgct      >  1:172654/1‑150 (MQ=255)
                                                                                                                                                   aaacCCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTGAACTGATCGCACCGGAAGGGATCTCGACTCGCCTGATCCCACAAGGAAGATTTGTGACTAATGATCCGATGACGCTGGTGCgctg     <  2:4135023/150‑1 (MQ=255)
                                                                                                                                                      aCCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTGAACTGATCGCACCGGAAGGGATCTCGACTCGCCTGATCCCACAAGGAAGATTTGTGACTAATGATCCGATGACGCTGGTGCgctggct  >  1:69503/1‑150 (MQ=255)
                                                                                                                                                      aCCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTGAACTGATCGCACCGGAAGGGATCTCGACTCGCCTGATCCCACAAGGAAGATTTGTGACTAATGATCCGATGACGCTGGTGCgctggct  >  1:3342960/1‑150 (MQ=255)
                                                                                                                                                      |                                                                                                                                                       
GCCCCCGACCTGATTGCCGACGGTCTGGATGTGGTGATCCGCGTCGGCGCGTTGCAGGATTCCAGCCTGTTTTCCCGCCGTCTGGGCGCGATGCCAATGGTGGTGTGCGCCGCGAAAAGCTATCTCACACAATACGGCATACCGGAAAAACCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTGAACTGATCGCACCGGAAGGGATCTCGACTCGCCTGATCCCACAAGGAAGATTTGTGACTAATGATCCGATGACGCTGGTGCGCTGGCT  >  AP012306/2857762‑2858060

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: