Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | AP012306 | 2,558,071 | 0 | A | C | 25.0% | 571.7 / 33.3 | 249 | V302G (GTA→GGA) | visC | predicted oxidoreductase, FAD/NAD(P)‑binding domain |
Reads supporting (aligned to +/- strand): ref base A (118/68); new base C (0/62); total (118/131) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 3.99e-22 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
Only 100 of 287 total aligned reads displayed.
CCTGCATACCAGCCAGCATCAACGCCGCACTGTGCTTGCGGCTACGCTCATAGCGACGCAGATAAATGTACTGCCCGATGTCTTTCCCCTGACGATGCAACCGTTTCAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGCTCTCAACCTTGCATAAGCCCAGGCGATTATCAAAA > AP012306/2557922‑2558220 | ccTGCATACCAGCCAGCATCAACGCCGCACTGTGCTTGCGGCTACGCTCATAGCGACGCAGATAAATGTACTGCCCGATGTCTTTCCCCTGACGATGCAACCGTTTCAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTa < 2:3694794/150‑1 (MQ=255) cTGCATACCAGCCAGCATCAACGCCGCACTGTGCTTGCGGCTACGCTCATAGCGACGCAGATAAATGTACTGCCCGATGTCTTTCCCCTGACGATGCAACCGTTTCAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTAc > 2:1677481/1‑150 (MQ=255) tGCATACCAGCCAGCATCAACGCCGCACTGTGCTTGCGGCTACGCTCATAGCGACGCAGATAAATGTACTGCCCGATGTCTTTCCCCTGACGATGCAACCGTTTCAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTAcc < 2:1361667/150‑1 (MQ=255) tGCATACCAGCCAGCATCAACGCCGCACTGTGCTTGCGGCTACGCTCATAGCGACGCAGATAAATGTACTGCCCGATGTCTTTCCCCTGACGATGCAACCGTTTCAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTAcc < 2:1441462/150‑1 (MQ=255) tGCATACCAGCCAGCATCAACGCCGCACTGTGCTTGCGGCTACGCTCATAGCGACGCAGATAAATGTACTGCCCGATGTCTTTCCCCTGACGATGCAACCGTTTCAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTAcc > 2:2912835/1‑150 (MQ=255) gCATACCAGCCAGCATCAACGCCGCACTGTGCTTGCGGCTACGCTCATAGCGACGCAGATAAATGTACTGCCCGATGTCTTTCCCCTGACGATGCAACCGTTTCAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTAccc < 1:1017305/150‑1 (MQ=255) gCATACCAGCCAGCATCAACGCCGCACTGTGCTTGCGGCTACGCTCATAGCGACGCAGATAAATGTACTGCCCGATGTCTTTCCCCTGACGATGCAACCGTTTCAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTAccc < 1:4103784/150‑1 (MQ=255) cATACCAGCCAGCATCAACGCCGCACTGTGCTTGCGGCTACGCTCATAGCGACGCAGATAAATGTACTGCCCGATGTCTTTCCCCTGACGATGCAACCGTTTCAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTAcccc < 1:1398151/150‑1 (MQ=255) aTACCAGCCAGCATCAACGCCGCACTGTGCTTGCGGCTACGCTCATAGCGACGCAGATAAATGTACTGCCCGATGTCTTTCCCCTGACGATGCAACCGTTTCAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTAccccc > 1:599930/1‑150 (MQ=255) ccagccagCATCAACGCCGCACTGTGCTTGCGGCTACGCTCATAGCGAAGCAGATAAATGTACTGCCCGATGTCTTTCCCCTGACGATGCAACCGTTTCAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCT‑Gc < 1:1675459/150‑1 (MQ=255) cATCAACGCCGCACTGTGCTTGCGGCTACGCTCATAGCGACGCAGATAAATGTACTGCCCGATGTCTTTCCCCTGACGATGCAACCGTTTCAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCT‑GCCCCGCCAg > 1:2151924/1‑150 (MQ=255) cAACGCCGCACTGTGCTTGCGGCTACGCTCATAGCGACGCAGATAAATGTACTGCCCGATGTCTTTCCCCTGACGATGCAACCGTTTCAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTCCCCCCT‑GCCCCGCCAGCgg < 1:1176608/150‑1 (MQ=255) ccgcACTGTGCTTGCGGCTACGCTCATAGCGACGCAGATAAATGTACTGCCCGATGTCTTTCCCCTGACGATGCAACCGTTTCAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCT‑GCCCCGCCAGCGGGTGaa > 2:743093/1‑150 (MQ=255) cgcACTGTGCTTGCGGCTACGCTCGTAGCGACGCAGATAAATGTACTGCCCGATGTCTTTCCCCTGACGATGCAACCGTTTCAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCT‑GCCCCGCCAGCGGGTGAAt < 1:3873974/150‑1 (MQ=255) gcACTGTGCTTGCGGCTACGCTCATAGCGACGCAGATAAATGTACTGCCCGATGTCTTTCCCCTGACGATGCAACCGTTTCAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCT‑GCCCCGCCAGCGGGTGAATg > 1:980567/1‑150 (MQ=255) gcACTGTGCTTGCGGCTACGCTCATAGCGACGCAGATAAATGTACTGCCCGATGTCTTTCCCCTGACGATGCAACCGTTTCAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCT‑GCCCCGCCAGCGGGTGAATg < 1:1081069/150‑1 (MQ=255) cACGGTGCTTGCGGCTACTCTCATAGCGACGCAGATAAATGTCCTGCCCGATGTCTTTCCCCTGACGATGCACCCGTTTCAGTTCGGCAATCAGCTCTGCAGCATCAATAAACCCGAGATTTACCCCCT‑GCCCCGCCAGCGGGTGAATgg < 2:4037230/150‑1 (MQ=255) tgtgCTTGCGGCTACGCTCATAGCGACGCAGAAAAATGTCCTGCCCGATGTCTTCCCCCTGACGATGCAACCGTTTCAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTCCCCCCT‑GCCCCGCCAGCGGGTGAATGGTAt < 2:1252891/150‑1 (MQ=255) gCTTGCGGCTACGCTCATAGCGACGCAGATAAATGTACTGCCCGATGTCTTTCCCCTGACGATGCAACCGTTTCAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTCCCCCCT‑GCCCCGCCAGCGGGTGAATGGTAtgtg < 2:3935121/150‑1 (MQ=255) tggcgcCTACGCTCATAGCGACGCAGAAAAATGTACGCCCCGATGTCTTCCCCCGGACGATGCACCCGTTCCAGTCCGGCAATCAGCTCTGCAGCACCCAAAAACCCGAGATTTCCCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTgcg < 2:1942813/148‑1 (MQ=255) gCGGCTACGCTCATAGCGACGCAGATAAATGTACTGCCCGATGTCTTTCCCCTGACGATGCAACCGTTTCAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTgcggc < 1:2292184/150‑1 (MQ=255) atggCGACCCAGAAAAATGTTCGGCCGGTTTTCTTCCCCCAGACGATGCACCCTTTTCAGTTCGGCAATCACTTCTGCAGCACCAAAAAAGCCGAGTTTTCCCCCCT‑CCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAg < 2:3189086/147‑1 (MQ=255) tAGCGACGCAGATAAATGTACTGCCCGATGTCTTTCCCTTGACGATGCAACCGTTTCAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTCCCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAgc < 1:1980012/150‑1 (MQ=255) tAGCGACGCAGATAAATGTACTGCCCGATGTCTTTCCCCTGACGATGCAACCGTTTCAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAgc > 2:1556856/1‑150 (MQ=255) aGCGACGCAGATAAATGTACTGCCCGATGTCTTTCCCCTGACGATGCAACCGTTTCAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAgcg > 2:343319/1‑150 (MQ=255) gACGCAGATAAATGTACTGCCCGATGTCTTTCCCCTGACGATGCAACCGTTTCAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCa > 2:566591/1‑150 (MQ=255) gCAGATAAATGTACTGCCCGATGTCTTTCCCCTGACGATGCAACCGTTTCAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGAc < 1:2984060/150‑1 (MQ=255) gATAAATGTACTGCCCGATGTCTTTCCCCTGACGATGCAACCGTTTCAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGt < 1:644599/150‑1 (MQ=255) aTAAATGTACTGCCCGATGTCTTTCCCCTGACGATGCAACCGTTTCAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCT‑GCCCCGCCAGCGGGTGAACGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTg < 1:3734107/150‑1 (MQ=255) aTAAATGTACCGCCCGTTTTCTTTCCCCTGACGATGCAACCGTTCCAGTTCGGCAACCAGCTCGGCAGCCTCCATAAAGCCGAGATTTCCCCCCT‑CCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTg < 2:4119433/150‑1 (MQ=255) tAAATGTACTGCCCGATGTCTTTCCCCTGACGATGCAACCGTTTCAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGc < 1:483585/150‑1 (MQ=255) tAAATGTACTGCCCGATGTCTTTCCCCTGACGATGCAACCGTTTCAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGc > 2:160114/1‑150 (MQ=255) tAAATGTACTGCCCGATGTCTTCCCCCTGCGGATGCAACCGTTCCAGTTCGGCAATCAGCTCTGCAGCACCCATAAAGCCGAGATTTACCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTGCAGCGTCGCCCACCAGCGCCAGACGGTGc < 1:2404735/150‑1 (MQ=255) aaTGTACTGCCCGATGTCTTTCCCCTGACGATGCAACCGTTTCAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGa > 2:2067176/1‑150 (MQ=255) gTACTGCCCGATGTCTTCCCCCTGACGATGCAACCGTTTCAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTCCCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGc < 2:2506886/150‑1 (MQ=255) cTGCCCGATGTCTTTCCCCTGACGATGCACCCTTTTCAGTTCGGCAATCAGCTCTGCAGCACCCATAAAGCCGAGATTTCCCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCaaa < 2:3477412/150‑1 (MQ=255) gCCCGATGTCTTTCCCCTGACGATGCAACCGTTTCAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACt < 1:1741529/150‑1 (MQ=255) gATGTCTTTCCCCTGACGATGCAACCGTTTCAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTCCCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGgcg < 1:721875/150‑1 (MQ=255) gTCTTTCCCCTGACGATGCAACCGTTTCAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGgcgcgc > 2:1758915/1‑150 (MQ=255) gTCTTTCCCCTGACGATGCAACAGTTTCAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGgcgcgc > 2:3106889/1‑150 (MQ=255) tCTTTCCCCTGACGATGCAACCGTTTCAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCa > 1:1947576/1‑150 (MQ=255) ttCCCCTGGGGATGAACCCTTTGCAGTGCGGCAAGCAGCTCTGCAGCAACCAGAAAGCCGAGATTTACCCCCT‑CCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATaa < 2:1832810/150‑1 (MQ=255) ttCCCCTGACGATGCAACCGTTTCAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATaa < 1:3545895/150‑1 (MQ=255) tCCCCTGACGATGCAACCGTTTCAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAAc > 1:383339/1‑150 (MQ=255) ccccAGACGATGCAACCGTTCCAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTCCCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACg < 1:1215456/150‑1 (MQ=255) cTGACGATGCAACCGTTTCAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGccc < 1:4051826/150‑1 (MQ=255) tGACGATGCAACCGTTTCAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTCCCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGcccc < 2:3808431/150‑1 (MQ=255) gACGATGCAACCGTTTCAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCg > 2:4207533/1‑150 (MQ=255) aCGATGCACCCGTTTCATTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTCCCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGt < 2:2238139/150‑1 (MQ=255) aCGATGCAACCGTTTCAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTCCCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGt < 1:143203/150‑1 (MQ=255) aCGATGCAACCGTTTCAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGt > 1:1260218/1‑150 (MQ=255) ggATGCACCCGTTTCAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTCCCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTc < 1:1066725/149‑1 (MQ=255) cGATGCAACCGTTTCAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTc > 1:962754/1‑150 (MQ=255) cGATGCAACCGTTTCAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTc > 1:3614829/1‑150 (MQ=255) aaCCGTTTCAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTggg > 1:4130105/1‑150 (MQ=255) ccGTTTCAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGaa < 1:2841138/150‑1 (MQ=255) cGTTTCAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTCCCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAac < 2:2018511/150‑1 (MQ=255) cGTTTCAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAac > 2:2692977/1‑150 (MQ=255) gTTTCAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTCCCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAaca < 2:3343746/150‑1 (MQ=255) tttCAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTCCCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAacac < 1:3949024/150‑1 (MQ=255) gTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGAc < 1:1480254/150‑1 (MQ=255) tCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGAcgc < 1:2338049/150‑1 (MQ=255) aaTCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGct > 2:2591802/1‑150 (MQ=255) aGCTCTGCAGCATCCATAAAGCCGAGATTTCCCCCCT‑GCCCCGCCAGCGGGTGAATGGTATTTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGCTCTCa < 2:2987495/150‑1 (MQ=255) aGCTCGGAAGCATCCATAAAGCCGAGATTTCCCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGCTCTCa < 2:1184606/150‑1 (MQ=255) gCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGCTCTCaa > 1:3208490/1‑150 (MQ=255) ctctGCAGCATCCATAAAGCCGAGATTTCCCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGCTCTCAAc < 1:208580/150‑1 (MQ=255) ctctGCAGCATCCATAAAGCCGAGATTTACCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGCTCTCAAc < 1:1856073/150‑1 (MQ=255) ctctGCAGCATCAATAAAGCCGAGATTTCCCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGCTCTCAAc < 2:2653022/150‑1 (MQ=255) ctcgGCAGCATCCATAAAGCCGAGATTTCCCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGCTCTCAAc < 1:4292761/150‑1 (MQ=255) ctGCAGCATCCATAACGCCGAGATTTCCCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGCTCTCAACCt < 2:3556098/150‑1 (MQ=255) ctGCAGCATCCATAAAGCCGAGTTTTCCCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGCTCTCAACCt < 2:3034753/150‑1 (MQ=255) ctGCAGCATCCATAAAGCCGAGATTTACCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGCTCTCAACCt > 1:3654103/1‑150 (MQ=255) tGCAGCATCCATAAAGCCGAGATTTCCCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGCTCTCAACCtt < 2:2838754/150‑1 (MQ=255) agcaTCCATAAAGCCGAGATTTCCCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGCTCTCAACCTTGCa < 2:2389292/150‑1 (MQ=255) gcaTCCATAAAGCCGAGATTTACCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGCTCTCAACCTTGCAt < 1:2171610/150‑1 (MQ=255) caTCCATAAAGCCGAGATTTACCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGCTCTCAACCTTGCATa < 1:3103037/150‑1 (MQ=255) caTCCATAAAGCCGAGATTTACCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGCTCTCAACCTTGCATa < 1:2728759/150‑1 (MQ=255) cATAAAGCCGAGATTTCCCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGCTCTCAACCTTGCATAAGcc < 2:2432840/150‑1 (MQ=255) cATAAAGCCGAGATTTCCCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGCTCTCAACCTTGCATAAGcc < 2:825606/150‑1 (MQ=255) cATAAAGCCGAGATTTCCCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGCTCTCAACCTTGCATAAGcc < 2:3373355/150‑1 (MQ=255) cATAAAGCCGAGATTTACCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGCTCTCAACCTTGCATAAGcc < 1:734758/150‑1 (MQ=255) tAAAGCCGAGATTTCCCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGCTCTCAACCTTGCATAAGCCCa < 2:1065924/150‑1 (MQ=255) tAAAGCCGAGATTTACCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGCTCTCAACCTTGCATAAGCCCa > 1:3327505/1‑150 (MQ=255) aaaccggagaTTCCCCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGCTCTCAACCTTGCATAAGCCCAg < 2:928609/144‑1 (MQ=255) aaaGCCGAGATTTACCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGCTCTCAACCTTGCATAAGCCCAg > 2:3419227/1‑150 (MQ=255) aaGCCGAGATTTCCCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGCTCTCAACCTTGCATAAGCCCAgg < 2:2305589/150‑1 (MQ=255) aGCCGAGATTTCCCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGCTCTCAACCTTGCATAAGCCCAGGc < 2:3612058/150‑1 (MQ=255) aGCCGAGATTTACCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGTAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGCTCTCAACCTTGCATAAGCCCAGGc > 1:202193/1‑150 (MQ=255) aGCCGAGATTTACCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGCTCTCAACCTTGCATAAGCCCAGGc > 1:3146555/1‑150 (MQ=255) gCCGAGATTTCCCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGCTCTCAACCTTGCATAAGCCCAGGCg < 1:3586384/150‑1 (MQ=255) cGAGATTTACCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGCTCTCAACCTTGCATAAGCCCAGGCGAt < 1:912933/150‑1 (MQ=255) ggggtttACCCCCTCGCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGCTCTCAACCTTGCATAAGCCCAGGCGAt < 2:4307394/146‑1 (MQ=255) agaTTTACCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGCTCTCAACCTTGCATAAGCCCAGGCGATTa < 1:1387625/150‑1 (MQ=255) gaTTTACCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGCTCTCAACCTTGCATAAGCCCAGGCGATTAt < 1:3905171/150‑1 (MQ=255) aTTTCCCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGCTCTCAACCTTGCATAAGCCCAGGCGATTATc < 1:529114/150‑1 (MQ=255) tttACCCCTG‑GCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGCTCTCAACCTTGCATAAGCCCAGGCGATTATCa < 1:247254/150‑1 (MQ=255) tttACCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGCTCTCAACCTTGCATAAGCCCAGGCGATTATCa < 1:3401378/150‑1 (MQ=255) tACCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGCTCTCAACCTTGCATAAGCCCAGGCGATTATCaaa < 1:1356857/150‑1 (MQ=255) aCCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGCTCTCAACCTTGCATAAGCCCAGGCGATTATCaaaa > 1:1597104/1‑150 (MQ=255) | CCTGCATACCAGCCAGCATCAACGCCGCACTGTGCTTGCGGCTACGCTCATAGCGACGCAGATAAATGTACTGCCCGATGTCTTTCCCCTGACGATGCAACCGTTTCAGTTCGGCAATCAGCTCTGCAGCATCCATAAAGCCGAGATTTACCCCCT‑GCCCCGCCAGCGGGTGAATGGTATGTGCGGCGTCGCCCACCAGCGCCAGACGGTGCGAGGCAAACTGGCGCGCATAACGCCCCGTCAGTGGGAACACCTGACGCGCGCTCTCAACCTTGCATAAGCCCAGGCGATTATCAAAA > AP012306/2557922‑2558220 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |