Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | AP012306 | 257,137 | 0 | T | G | 26.7% | 367.7 / 13.7 | 172 | L496V (TTG→GTG) | betT | choline transporter of high affinity |
Reads supporting (aligned to +/- strand): ref base T (85/41); new base G (46/0); total (131/41) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 4.08e-07 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
Only 100 of 255 total aligned reads displayed.
CCCCCGGCTGGCTGCGCGTCTTCTGGTCGGTGGCGATTGGCCTGCTGACGCTCGGCATGCTGATGACTAACGGGATATCCGCGCTGCAAAACACCACGGTGATTATGGGGCTGCCGTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGTTGTATAAA‑TCTCTGAAGGTAGAAGATTACCGCCGTGAAAGTGCCAACCGCGATACCGCACCGCGACCGCTGGGGCTTCAGGATCGCCTGAGCTGGAAAAAACGTCTCTCGCGCCTGATGAATTATCCGGGCACGCGTTACACTAAACAG > AP012306/256988‑257286 | cccccGGCTGGCTGCGCGTCTTCTGGTCGGTGGCGATTGGCCTGCTGACGCTCGGCATGCTGATGACTAACGGGATATCCGCGCTGCAAAACACCACGGTGATTATGGGGCTGCCGTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGt > 1:1979097/1‑150 (MQ=255) ccccGGCTGGCTGCGCGTCTTCTGGTCGGTGGCGATTGGCCTGCTGACGCTCGGCATGCTGATGACTAACGGGATATCCGCGCTGCAAAACACCACGGTGATTATGGGGCTGCCGTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGtt < 1:2985775/150‑1 (MQ=255) ccccGGCTGGCTGCGCGTCTTCTGGTCGGTGGCGATTGGCCTGCTGACGCTCGGCATGCTGATGACTAACGGGATATCCGCGCTGCAAAACACCACGGTGATTATGGGGCTGCCGTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGtt > 1:168628/1‑150 (MQ=255) ccccGGCTGGCTGCGCGTCTTCTGGTCGGTGGCGATTGGCCTGCTGACGCTCGGCATGCTGATGACTAACGGGATATCCGCGCTGCAAAACACCACGGAGATTATGGGGCTGCCGTTCAGCTTTGTTATCTTCTTCGTGATGGCGGGGtt > 2:2818903/1‑150 (MQ=255) cGGCTGGCTGCGCGTCTTCTGGTCGGTGGCGATTGGCCTGCTGACGCTCGGCATGCTGATGACTAACGGGATATCCGCGCTGCAAAACACCACGGTGATTATGGGGCTGCCGTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGgtgtg > 2:1278007/1‑149 (MQ=255) ggctggctGCGCGTCTTCTGGTCGGTGGCGATTGGCCTGCTGACGCTCGGCATGCTGATGACTAACGGGATATCCGCGCTGCAAAACACCACGGTGATTATGGGGCTGCCGTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGTTGtat > 2:886402/1‑150 (MQ=255) gctggctgCGCGTCTTCTGGTCGGTGGCGATTGGCCTGCTGACGCTCGGCATGCTGATGACTAACGGGATATCCGCGCTGCAAAACACCACGGTGATTATGGGGCTGCCGTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGGTGtata > 2:1871319/1‑150 (MQ=255) ctggctgCGCGTCTTCTGGTCGGTGGCGATTGGCCTGCTGACGCTCGGCATGCTGACGACTAACGGGATATCCGCGCTGCAAAACACCACGGTGATTATGGGGCTGCCGTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGTTGtgtta > 2:2452194/1‑146 (MQ=255) tggctgCGCGTCTTCTGGTCGGTGGCGATTGGCCTGCTGACGCTCGGCATGCTGATGACTAACGGGATATCCGCGCTGCAAAACACCACGGTGATTATGGGGCTGCCGTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGTTGTATaaa < 1:1941551/150‑1 (MQ=255) tggctgCGCGTCTTCTGGTCGGTGGCGATTGGCCTGCTGACGCTCGGCATGCTGATGACTAACGGGATATCCGCGCTGCAAAACACCACGGTGATTATGGGGCTGCCGTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGGTGTATaaa > 2:966694/1‑150 (MQ=255) ggctgCGCGTCTTCTGGTCGGTGGCGATTGGCCTGCTGACGCTCGGCATGCTGATGACTAACGGGATATCCGCGCTGCAAAACACCACGGTGATTATGGGGCTGCCGTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGTTGTATAAA‑t < 2:2238143/150‑1 (MQ=255) gctgCGCGTCTTCTGGTCGGTGGCGATTGGCCTGCTGACGCTCGGCATGCTGATGACTAACGGGATATCCGCGCTGCAAAACACCACGGTGATTATGGGGCTGCCGTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGTTGTATAAA‑tc < 1:1104992/150‑1 (MQ=255) gctgCGCGTCTTCTGGTCGGTGGCGATTGGCCTGCTGACGCTCGGCATGCTGATGACTAACGGGATATCCGCGCTGCAAAACACCACGGTGATTATGGGGCTGCCGTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGTTGTATAAA‑tc < 1:1554680/150‑1 (MQ=255) ctgCGCGTCTTCTGGTCGGTGGCGATTGGCCTGCTGACGCTCGGCATGCTGATGACTAACGGGATATCCGCGCTGCAAAACACCACGGTGATTATGGGGCTGCCGTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGTTGTATAAA‑tct < 2:1018295/150‑1 (MQ=255) ctgCGCGTCTTCTGGTCGGTGGCGATTGGCCTGCTGACGCTCGGCATGCTGATGACTAACGGGATATCCGCGCTGCAAAACACCACGGTGATTATGGGGCTGCCGTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGGTGTATAAA‑tct > 1:35229/1‑150 (MQ=255) tgCGCGTCTTCTGGTCGGTGGCGATTGGCCTGCTGACGCTCGGCCTGCTGATGACTAACGGGATATCCGCGCTGCAAAACACCACGGTGATTATGGGGCTGCCGTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGGTGTATGAA‑tctc > 2:2975055/1‑150 (MQ=255) gcgcGTCTTCTGGTCGGTGGCGATTGGCCTGCTGACGCTCGGCATGCTGATGACTAACGGGATATCCGCGCTGCAAAACACCACGGTGATTATGGGGCTGCCGTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGTTGTATAAA‑Tctct < 2:603915/150‑1 (MQ=255) gcgcGTCTTCTGGTCGGTGGCGATTGGCCTGCTGACGCTCGGCATGCTGATGACTAACGGGATATCCGCGCTGCAAAACACCACGGTGATTATGGGGCTGCCGTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGTTGTATAAA‑Tctct < 1:2232983/150‑1 (MQ=255) gcgcGTCTTCTGGTCGGTGGCGATTGGCCTGCTGACGCTCGGCATGCTGATGACTAACGGGATATCCGCGCTGCAAAACACCACGGTGATTATGGGGCTGCCGTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGTTGTATAAA‑Tctct < 1:3430239/150‑1 (MQ=255) gcgTCTTCTGGTCGGTGGCGATTGGCCTGCTGACGCTCGGCATGCTGATGACTAACGGGATATCCGCGCTGCAAAACACCACGGTGATTATGGGGCTGCCGTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGTTGTATAAA‑TCTCTGa > 1:2648020/1‑150 (MQ=255) gcgTCTTCTGGTCGGTGGCGATTGGCCTGCTGACGCTCGGCATGCTGATGACTAACGGGATATCCGCGCTGCAAAACACCACGGTGATTATGGGGCTGCCGTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGTTGTATAAA‑TCTCTGa < 1:2606883/150‑1 (MQ=255) cgTCTTCTGGTCGGTGGCGATTGGCCTGCTGACGCTCGGCATGCTGCTGACTAACGGGATATCCGCGCTGCAAAACACCACGGTGATTATGGGGCTGCCGTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGTTGGATTAA‑TCTCTGaa > 2:1661817/1‑150 (MQ=255) gTCTTCTGGTCGGTGGCGATTGGCCTGCTGACGCTCGGCATGCTGATGACTAACGGGATATCCGCGCTGCAAAACACCACGGTGATTATGGGGCTGCCGTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGTTGTTTAAA‑TCTCTGAAg > 2:1597445/1‑150 (MQ=255) gTCTTCTGGTCGGTGGCGATTGGCCTGCTGACGCTCGGCATGCTGATGACTAACGGGATATCCGCGCTGCAAAACACCACGGTGATTATGGGGCTGCCGTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGTTGTATAAA‑TCTCTGAAg < 1:908237/150‑1 (MQ=255) cttctGGTCGGTGGCGATTGGCCTGCTGACGCTCGGCATGCTGATGACTAACGGGATATCCGCGCTGCAAAACACCACGGTGATTATGGGGCTGCCGTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGGTGTATAAA‑TCTCTGAAGGt > 1:3223908/1‑150 (MQ=255) ggTCGGTGGCGATTGGCCTGCTGACGCTCGGCATGCTGATGACTAACGGGATATCCGCGCTGCAAAACACCACGGTGATTATGGGGCTGCCGTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGTTGTATAAA‑TCTCTGAAGGTagaag < 1:3657679/150‑1 (MQ=255) ggTCGGTGGCGATTGGCCTGCTGACGCTCGGCATGCTGATGACTAACGGGATATCCGCGCTGCAAAACACCACGGTGATTATGGGGCTGCCGTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGTTGTATAAA‑TCTCTGAAGGTagaag > 1:2277279/1‑150 (MQ=255) tCGGTGGCGATTGGCCTGCTGACGCTCGGCATGCTGATGACTAACGGGATATCCGCGCTGCAAAACACCACGGTGATTATGGGGCTGCCGTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGTTGTATAAA‑TCTCTGAAGGTAGAAGAt > 1:1008712/1‑150 (MQ=255) tCGGTGGCGATTGGCCTGCTGACGCTCGGCATGCTGATGACTAACGGGATATCCGCGCTGCAAAACACCACGGTGATTATGGGGCTGCCGTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGTTGTATAAA‑TCTCTGAAGGTAGAAGAt < 1:1508651/150‑1 (MQ=255) ggTGGCGATTGGCCTGCTGACGCTCGGCATGCTGATGACTAACGGGATATCCGCGCTGCAAAACACCACGGTGATTATGGGGCTGCCGTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGTTGTATAAA‑TCTCTGAAGGTAGAAGATTa > 1:346010/1‑150 (MQ=255) gCGATTGGCCTGCTGACGCTCGGCATGCTGATGACTAACGGGATATCCGCGCTGCAAAACACCACGGTGATTATGGGGCTGCCGTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGGTGTATAAA‑TCTCTGAAGGTAGAAGATTAccgc > 2:3239487/1‑150 (MQ=255) cGATTGGCCTGCTGACGCTCGGCATGCTGATGACTAACGGGATATCCGCGCTGCAAAACACCACGGTGATTATGGGGCTGCCGTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGTTGTATAAA‑TCTCTGAAGGTAGAAGATTAccgcc < 1:1661067/150‑1 (MQ=255) aTTGGCCTGCTGACGCTCGGCATGCTGATGACTAACGGGATATCCGCGCTGCAAAACACCACGGTGATTATGGGGCTGCCGTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGTTGTATAAA‑TCTCTGAAGGTAGAAGATTACCGCCGt > 1:467136/1‑150 (MQ=255) ccTGCTGACGCTCGGCATGCTGATGACTAACGGGATATCCGCGCTGCAAAACACCACGGTGATTATGGGGCTGCCGTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGGTGTTTAAA‑TCTCTGAAGGTAGAAGATTACCGCCGTTAAAg > 2:302092/1‑150 (MQ=255) ccTGCTGACGCTCGGCATGCTGATGACTAACGGGATATCCGCGCTGCAAAACACCACGGTGATTATGGGGCTGCCGTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGGTGTATAAA‑TCTCTGAAGGTAGAAGATTACCGCCGTGAAAg > 1:2353328/1‑150 (MQ=255) gctgACGCTCGGCATGCTGATGACTAACGGGATATCCGCGCTGCAAAACACCACGGTGATTATGGGGCTGCCGTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGTTGTATAAA‑TCTCTGAAGGGAGAAGATTACCGCCGTGAAAGTGc > 2:402943/1‑150 (MQ=255) ctgACGCTCGGCATGCTGATGACTAACGGGATATCCGCGCTGCAAAACACCACGGTGATTATGGGGCTGCCGTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGGTGTATAAA‑ATTCTTAAAGTAAGAAATTACCGCCGTGAAAGGGcg > 2:1753430/1‑149 (MQ=255) tgACGCTCGGCATGCTGATGACTAACGGGATATCCGCGCTGCAAAACACCACGGTGATTATGGGGCTGCCGTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGGTGTATAAA‑TCTCTGAAGGTAGAAGATTACCGCCGTGAAAGTGCCa > 2:2944446/1‑150 (MQ=255) cTCGGCATGCTGATGACTAACGGGATATCCGCGCTGCAAAACACCACGGTGATTATGGGGCTGCCGTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGTTGTATAAA‑TCTCTGAAGGTAGAAGATTACCGCCGTGAAAGTGCCAACcgc > 1:3574162/1‑150 (MQ=255) cGGCATGCTGATGACTAACGGGATATCCGCGCTGCAAAACACCACGGTGATTATGGGGCTGCCGTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGGTGTATAAA‑TCTCTGAAGGGAGAAGATTACCGCCGTGAAAGTGCCAACCGCGa > 1:437499/1‑150 (MQ=255) ggCATGCTGATGACTAACGGGATATCCGCGCTGCAAAACACCACGGTGATTATGGGGCTGCCGTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGTTGTATAAA‑TCTCTGAAGGTAGAAGATTACCGCCGTGAAAGTGCCAACCGCGAt > 1:311015/1‑150 (MQ=255) ggCATGCTGATGACTAACGGGATATCCGCGCTGCAAAACACCACGGTGATTATGGGGCTGCCGTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGTTGTATAAA‑TCTCTGAAGGGAGAAGATTACCGCCGTGAAAGTGCCAACCGCGAt > 2:2022794/1‑150 (MQ=255) aTGCTGATGACTAACGGGATATCCGCGCTGCAAAACACCACGGTGATTATGGGGCTGCCGTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGGTGTATAAA‑TCTCTGAAGGTAGAAGATTACCGCCGTGAAAGTGCCAACCGCGATacc > 2:3712416/1‑150 (MQ=255) tGCTGATGACTAACGGGATATCCGCGCTGCAAAACACCACGGTGATTATGGGGCTGCCGTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGTTGTATAAA‑TCTCTGAAGGTAGAAGATTACCGCCGTGAAAGTGCCAACCGCGATaccg > 2:2922142/1‑150 (MQ=255) tgaCTAACGGGATATCCGCGCTGCAAAACACCACGGTGATTATGGGGCTGCCGTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGTTGTATAAA‑TCTCTGAAGGTAGAAGATTACCGCCGTGAAAGTGCCAACCGCGATaccgcaccgc > 2:2677710/1‑150 (MQ=255) tgaCTAACGGGATATCCGCGCTGCAAAACACCACGGTGATTATGGGGCTGCCGTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGGTGTATAAA‑TATCTGAAGGGAGAAAATTACCACCGGGAAAGGGCCAACCGCGATaccccaccgc > 2:3284366/1‑150 (MQ=255) aCTAACGGGATATCCGCGCTGCAAAACACCACGGTGATTATGGGGCTGCCGTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGGTGTATAAA‑TCTCTGAAGGGGGAAGATTACCGCCGGGAAAGGGCCAACCGCGATACCGCCCCGCGa > 2:1106536/1‑150 (MQ=255) cTAACGGGATATCCGCGCTGCAAAACACCACGGTGATTATGGGGCTGCCGTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGTTGTATAAA‑TCTCTGAAGGTAGAAGATTACCGCCGTGAAAGAGCCAACCGCGATACCGCACCGCGAc > 1:2314902/1‑150 (MQ=255) gggATATCCGCGCTGCAAAACACCACGGTGATTATGGGGCTGCCGTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGTTGTATAAA‑TCTCTTAAGGGAGAAGATTATCGCCGTGAAAATGTCAACCGGGATACCACGCCGCGAcccccg > 2:3359050/1‑146 (MQ=255) ggATATCCGCGCTGCAAAACACCACGGTGATTATGGGGCTGCCGTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGGTTTATAAA‑TCTCTGAAGGGAGAAGAATACCGCCGTGAAAAAGCCCACCGCGAAAACCCACCCCGGCCGCTgg > 2:1945180/1‑150 (MQ=255) gATATCCGCGCTGCAAAACACCACGGTGATTATGGGGCTGCCGTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGGGGTATAAA‑TCTCTGAAGGAACAAAAATTCCCCCGTGAAAACGCCCCACACGCAACCGCACCGCGAACGCTggg > 2:3186920/1‑150 (MQ=255) tCCGCGCTGCAAAACACCACGGTGATTATGGGGCTGCCGTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGGTGGATAAA‑TCTCTGAGGGGAGAAGGTTACCCCCGTGGAAGTGGCAACCGGGGTACCCCACCGCGAACGCTGGGGCtt > 2:3107303/1‑150 (MQ=255) cgcgCTGCAAAACACCACGGTGATTATGGGGCTGCCGTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGTTGTATAAA‑TCTCTGAAGGTAGAAGATTACCGCCGTGAAAGTGCCAACCGCGATACCGCACCGCGACCGCTGGGGCTTCa > 1:2058203/1‑150 (MQ=255) gcTGCAAAACACCACGGTGATTATGGGGCTGCCGTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGGTGTATAAA‑TCTCTGAAGGGAGAAGATTACCGCCGGGAAAGGGGCAACCGCGATACCGCACCGCGACCGCTGGGGCTTCAGGa > 2:3960749/1‑150 (MQ=255) cTGCAAAACACCACGGTGATTATGGGGCTGCCGTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGTTGTATAAA‑TCTCTGAAGGTAGAAGATTACCGCCGTGAAAGTGCCAACCGCGATACCGCACCGCGACCGCTGGGGCTTCAGGAt > 2:3380067/1‑150 (MQ=255) cAAAACACCACGGTGATTATGGGGCTGCCGTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGTTGTATAAA‑TCTCTGAAGGTAGAAGATTACCGCCGTGAAAGTGCCAACCGCGATACCGCACCGCGACCGCTGGGGCTTCAGGATCGc > 1:1407241/1‑150 (MQ=255) aaaaCACCACGGTGATTATGGGGCTGCCGTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGTTGTATAAA‑TCTCTGAAGGTAGAAGATTACCGCCGTGGAAGTGCCAACCGCGATACCGCACCGCGACCGCTGGGGCTTCAGGATCGcc > 1:1773077/1‑150 (MQ=255) accacGGTGATTATGGGGCTGCCGTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGTTGTATAAA‑TCTCTGCAGGTAGAAGATTAACGCCGTGAAAGTGCCAACCGCGATACCGCACCGCGACCCCTGGGGCTTCAGGATCGCCTGAGc > 2:3672247/1‑150 (MQ=255) ccacGGTGATTATGGGGCTGCCGTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGTTGTATAAA‑TCTCTGAAGGTAGAAGATTACCGCCGTGAAAGTGCCAACCGCGATACCGCACCGCGACCGCTGGGGCTTCAGGATCGCCTGAGCt > 2:3778509/1‑150 (MQ=255) cacGGTGATTATGGGGCTGCCGTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGGTGTATAAA‑TCTCTGAAGGTAGAAGATTACCGCCGTGAAAGTGCCAACCGCGATACCGCACCGCGACCGCTGGGGCTTCAGGATCGCCTGAGCTg > 2:320020/1‑150 (MQ=255) acGGTGATTATGGGGCTGCCGTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGTTGTTTAAA‑TTTCTGAAGGGAGAAGATTACCGCCGTGAAAGTGGCAACCTCGCTACCGCACCCCGACCCCTGGGGGCTCCTGTTCGGCCGAGCTgg > 2:3982078/1‑150 (MQ=255) acGGTGATTATGGGGCTGCCGTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGTTGTATAAA‑TCTCTGAAGGTAGAAGATTACCGCCGTGAAAGTGCCAACCGCGATACCGCACCGCGACCGCTGGGGCTTCAGGATCGCCTGAGCTgg > 1:2689588/1‑150 (MQ=255) cGGTGATTATGGGGCTGCCGTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGGTGTATAAA‑TCTCTGAAGGTAGAAGATTACCGCCGTGAAAGTGCCAACCGCGATACCGCACCGCGACCGCTGGGGCTTCAGGATCGCCTGAGCTGGa > 2:2049578/1‑150 (MQ=255) ggTGATTATGGGGCTGCCGTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGGTGTATAAA‑TCTCTGAAGGTAGAAGATTACCGCCGTGAAAGTGCCAACCGCGATACCGCACCGCGACCGCTGGGGCTTCAGGATCGCCTGAGCTGGaa > 1:3956005/1‑150 (MQ=255) tGATTATGGGGCTGCCGTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGTTGTATAAA‑TCTCTGAAGGTAGAAGATTACCGCCGTGAAAGTGCCAACCGCGATACCGCACCGCGACCGCTGGGGCCTCAGGATCGCCTGAGCTGGaaaa > 1:3618388/1‑150 (MQ=255) ttATGGGGCTGCCGTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGGTGTATAAA‑TCTCTGAAGGTAGAAGATTACCGCCGTGGAAGTGCCAACCGCGATACCGCACCGCGACCGCTGGGGCTTCAAGATCGCCTGAGCTGGAAAAAAc > 2:3147466/1‑150 (MQ=255) ttATGGGGCTGCCGTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGGTGTATAAA‑TCTCTGAAGGTAGAAGATTACCGCCGTGAAAGTGCCAACCGCGGTACCGCACCGCGACCGCTGGGGCTTCAGGATCGCCTGAGGTGGAAAAAAc > 2:2394225/1‑150 (MQ=255) tGGGGCTGCCGTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGTTGTATAAA‑TCTCTGAAGGTAGAAGATTACCGCCGTGAAAGTGCCAACCGCGATACCGCACCGCGACCGCTGGGGCTTCAGGATCGCCTGGGCTGGAAAAAACGtc > 2:1512655/1‑150 (MQ=255) tGGGGCTGCCGTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGTTGTATAAA‑TCTCTGAAGGTAGAAGATTACCGCCGTGAAAGTGCCAACCGCGATACCGCACCGCGACCGCTGGGGCTTCAGGATCGCCTGAGCTGGAAAAAACGtc > 2:500045/1‑150 (MQ=255) ggggCTGCCGTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGGTGTATAAA‑TCTCTGAAGGTAGAAGATTACCGCCGTGAAAGTGCCAACCGCGATACCGCACCGCGACCGCTGGGGCTTCAGGATCGCCTGAGCTGGAAAAAACGtct > 2:2528534/1‑150 (MQ=255) ggggCTGCCGTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGGTGTATAAA‑TCTCTGAAGGTAGAAGATTACCGCCGTGAAAGTGCCAACCGCGATACCGCACCGCGACCGCTGGGGCTTCAGGATCGCCTGAGCTGGAAAAAACGtct > 2:1164500/1‑150 (MQ=255) ccGTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGGTGTATAAA‑TCTCTGAAGGGAGAAGATTACCGCCGTGAAAGGGCCAACCGCGATACCGCACCGCGACCGCTGGGGCTTCAGGATCGCCTGAGCTGGAAAAAACGTCTCTCccgc > 2:804560/1‑150 (MQ=255) gTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGTTGTATAAA‑TCTCTGAAGGTAGAAGATTACCGCCGTGAAAGTGCCAACCGCGATACCGCACCGCGACCGCTGGGGCTTCAGGATCGCCTGAGCTGGAAAAAACGTCTCTCCCGccc > 1:3882466/1‑149 (MQ=255) cAGCTTTGTGATCTTCTTCGTGATGGCGGGGTTGTATAAA‑TCTCTGAAGGTAGAAGATTACCGCCGTGAAAGTGCCAACCGCGATACCGCACCGCGACCGCTGGGGCTTCAGGATCGCCTGAGCTGGAAAAAACGTCTCTCGCGCCtgat > 1:318384/1‑150 (MQ=255) aGCTTTGTGATCTTCTTCGTGATGGCGGGGGTGTATAAA‑TCTCTGAAGGTAAAAGATTACCCCCGTGAAAGTGCCAACCGCGATACCGCACCGCGACCGCTGGGGCTTCAGGATCGCCTGAGCTGGGAAAAACGTCTCTCGCGCCtgatg > 2:3599338/1‑150 (MQ=255) tttGTGATCTTCTTCGTGATGGCGGGGTTGTATTAA‑ACTCTCTAGGTAGAAGATTATCGCCGTGAAAGTGACAACCTGGATACCGCCCCGCGACCGGTGGGGGTTTTAGGTTGCCTTCACTTGAAAAAACGACCCGCCCGCCTGTGGAAt > 2:1420541/1‑150 (MQ=255) tttGTGATCTTCTTCGTGATGGCGGGGTTGTATAAA‑TCTCTGAAGGTAGAAGATTACCGCCGTGAAAGTGCCAACCGCGATACCGCACCGCGACCGCTGGGGCTTCAGGATCGCCTGAGCTGGAAAAAACGTCTCTCGCGCCTGATGAAt > 1:2155003/1‑150 (MQ=255) ttGTGCTTTTCTGCGGGAGGGGGGGGTTTTAAAAA‑TCTGTGAAGGTAAAAGATTACCGCCGTGAAAGTGCCAACCGCGATACCGCACCGCGACCGCTGGGGCTTCAGGATCGCCTGAGCTGGAAAAAACGTCTCTCGCGCCTGATGAAtt < 1:999795/150‑1 (MQ=255) ttGTGCTCTTGTGCGTGGTGGGGGGGTTGAAAAAC‑TCCCTGAAGGAAGAAAATTACCGCCGTGAAAGTGCCAACCGCGATACCGCACCGCGACCGCTGGGGCTTCAGGATCGCCTGAGCTGGAAAAAACGTCTCTCGCGCCTGATGAAtt < 1:2527818/150‑1 (MQ=255) ttGTGATCTTCTTGGTGGGGGGGGGGTTGTATAAA‑TCTCTGAGGGTAGAAGATTACCGCCGTGAAAGTGCCAACCGCGATACCGCACCGCGACCGCTGGGGCTTCAGGATCGCCTGAGCTGGAAAAAACGTCTCTCGCGCCTGATGAAtt < 1:672192/150‑1 (MQ=255) tgttttcttctTGGTG‑GGGGGGGGTTTTAAAAATTTTCGGAGGGTAGAATATTGCCGCCGTGAAAGTGCCAACCGCGATACCGCACCGCGACCGCTGGGGCTTCAGGATCGCCTGAGCTGGAAAAAACGTCTCTCGCGCCTGATGAATTa < 2:3604996/145‑1 (MQ=255) gtgATCTTCTTCGTGATGGCGGGGTTGTATAAA‑TCTCTGAAGGTAGAAGATTACCGCCGTGAAAGTGCCAACCGCGATACCGCACCGCGACCGCTGGGGCTTCAGGATCGCCTGAGCTGGAAAAAACGTCTCTCGCGCCTGATGAATTAt > 1:2573436/1‑150 (MQ=255) gtgATCTTCTTCGTGATGGCGGGGTTGTATAAA‑TCTCTGAAGGTAGAAGATTACCGCCGTGAAAGTGCCAACCGCGATACCGCACCGCGACCGCTGGGGCTTCAGGATCGCCTGAGCTGGAAAAAACGTCTCTCGCGCCTGATGAATTAt > 1:1217072/1‑150 (MQ=255) tcttctTCGTGATGGCGGGGGTGTATAAA‑ACTCTGAAGGTAAAAGATTACCGCCGTGAAAGTGCCAACCGCGATACCGCCCCGCGACCCCTGGGGCTTCAGGATCCCCTGAGCTGGAAAAAACGCCTCTCGCGCCCGATGAATTATCCgg > 2:3571214/1‑150 (MQ=255) cttcttCGTGATGGCGGGGGTTTATAAA‑TCTTTCAAGGGAGAAGATTAACGCCGTGGAAGTGCCAACCGCGATATCCCACCGCGACCGCTGGGGCTTCAGGGTCGCCTGAGCTGGAAAAAACGTCTCTCGCGCCTGATGAATTATTCggg > 2:1547924/1‑150 (MQ=255) cttcttCGTGATGGCGGGGGTGTATAAA‑TCTCTGAAGGGAGAAGATTACCGCCGTGAAAGTGCCAACCGCGATACCGCCCCGCGACCGCTGGGGCTTCAGGATCGCCTGAGCTGGAAAAAACGTCTCTCGCGCCTGATGAATTATCCggg > 2:3833323/1‑150 (MQ=255) ttcttcGTGATGGCGGGGTTGTATAAA‑TCTCTGAAGGTAGAAGATTACCGCCGTGAAAGTGCCAACCGCGATACCGCACCGCGACCGCTGGGGCTTCAGGATCGCCTGAGCTGGAAAAAACGTCTCTCGCGCCTGATGAATTATCCGGGc > 2:1394123/1‑150 (MQ=255) ttcGTGATGGCGGGGTTGTATAAA‑TCTCTGAAGGTAGAAGATTACCGCCGTGAAAATGCCAACCGCGATACCACCCCGCGACCGCCGGGGCTTCACGATCGCCTGAGCTGGAAAAAACGTCTCTCGCGCCTGATGAATTATCCGGGCAcg > 1:2798241/1‑150 (MQ=255) ttcGTGATGGCGGGGTTGTATAAA‑TCTCTGAAGGTAAAAGATTAACCCCGGGGAAGGGCCAACCGCGGTACCGCACCGCGACCCCTGGGGCTTCAGGATGGCCTGAGCTGGGAAAAACGGCTCTCGCGCCTGCTGAATTATCCggggccg > 2:1819778/1‑146 (MQ=255) tcGTGGGGGGGGGTTTGTATAAA‑TCTCAGAAGGTAGAAGATTACCGCCGTGAAAGTGCCAACCGCGATACCGCACCGCGACCGCTGGGGCTTCAGGATCGCCTGAGCTGGAAAAAACGTCTCTCGCGCCTGATGAATTATCCGGGCAcgc < 1:401239/150‑1 (MQ=255) gTGATGGCGGGGTTGTATAAA‑TCTCTGAAGGGAGAAGATTACCGCCGTGAAAGTGCCAACCGCGATACCGCACCGCGACCGCTGGGGCTTCAGGATCGCCTGAGCTGGAAAAAACGTCTCTCGCGCCTGATGAATTATCCGGGCACGCGt > 1:1198723/1‑150 (MQ=255) gATGGCGGGGTTGTATAAA‑TCTCTGAAGGTAGAAGATTACCGCCGTGAAAGTGCCAACCGCGATACCGCACCGCGACCGCTGGGGCTTCAGGATCGCCTGAGCTGGAAAAAACGTCTCTCGCGCCTGATGAATTATCCGGGCACGCGTTa > 1:2206318/1‑150 (MQ=255) gATGGCGGGGTTGTATAAA‑TCTCTGAAGGTAGAAGATTACCGCCGTGAAAGTGCCAACCGCGATACCGCACCGCGACCGCTGGGGCTTCAGGATCGCCTGAGCTGGAAAAAACGTCTCTCGCGCCTGATGAATTATCCGGGCACGCGTTa > 1:595687/1‑150 (MQ=255) gATGGCGGGGTTGTATAAA‑TCTCTGAAGGTAGAAGATTACCGCCGTGAAAGTGCCAACCGCGATACCGCACCGCGACCGCTGGGGCTTCAGGATCGCCTGAGCTGGAAAAAACGTCTCTCGCGCCTGATGAATTATCCGGGCACGCGTTa > 1:3365420/1‑150 (MQ=255) tggggggggTTTTATAAA‑TCTAGGAGGGAAGAAGTTTACCGCCGTGAAAGTGCCAACCGCGATACCGCACCGCGACCGCTGGGGCTTCAGGATCGCCTGAGCTGGAAAAAACGTCTCTCGCGCCTGATGAATTATCCGGGCACGCGTTac < 2:5906/145‑1 (MQ=255) cGGGGTTGTATAAA‑TCTCTGAAGGTAGAAGATTACCGCCGTGAAAGTGCCAACCGCGATACCGCACCGCGACCGCTGGGGCTTCAGGATCGCCTGAGCTGGAAAAAACGTCTCTCGCGCCTGATGAATTATCCGGGCACGCGTTACACTa > 2:4104325/1‑150 (MQ=255) ggggTTGTATAAA‑TCTCTGAAGGTAGAAGATTACCGCCGTGAAAGTGCCAACCGCGATACCGCACCGCGACCGCTGGGGCTTCAGGATCGCCTGAGCTGGAAAAAACGTCTCTCGCGCCTGATGAATTATCCGGGCACGCGTTACACTaa > 1:1275539/1‑150 (MQ=255) ggggTTGTATAAA‑TCTCTGAAGGTAGAAGATTACCGCCGTGAAAGTGCCAACCGCGATACCGCACCGCGACCGCTGGGGCTTCAGGATCGCCTGAGCTGGAAAAAACGTCTCTCGCGCCTGATGAATTATCCGGGCACGCGTTACACTaa > 1:855724/1‑150 (MQ=255) gggTTGTATAAA‑TCTCTGAAGGTAGAAGATTACCGCCGTGAAAGTGCCAACCGCGATACCGCACCGCGACCGCTGGGGCTTCAGGATCGCCTGAGCTGGAAAAAACGTCTCTCGCGCCTGATGAATTATCCGGGCACGCGTTACACTaaa > 2:2663821/1‑150 (MQ=255) tttGTATAAT‑TCTCGAAGGGAAGAAGTTTGCCGCCGTGAAAGTGCCAACCGCGATACCGCACCGCGACCGCTGGGGCTTCAGGATCGCCTGAGCTGGAAAAAACGTCTCTCGCGCCTGATGAATTATCCGGGCACGCGTTACACTAAACa < 2:2317924/149‑1 (MQ=255) | CCCCCGGCTGGCTGCGCGTCTTCTGGTCGGTGGCGATTGGCCTGCTGACGCTCGGCATGCTGATGACTAACGGGATATCCGCGCTGCAAAACACCACGGTGATTATGGGGCTGCCGTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGTTGTATAAA‑TCTCTGAAGGTAGAAGATTACCGCCGTGAAAGTGCCAACCGCGATACCGCACCGCGACCGCTGGGGCTTCAGGATCGCCTGAGCTGGAAAAAACGTCTCTCGCGCCTGATGAATTATCCGGGCACGCGTTACACTAAACAG > AP012306/256988‑257286 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |