| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP012306 | = 2470298 | 341 (1.060) | 7 (0.020) | 6/290 | 13.7 | 2.1% | coding (2666/3369 nt) | recC | exonuclease V (RecBCD complex), gamma chain |
| ? | AP012306 | = 2470321 | 309 (0.990) | coding (2643/3369 nt) | recC | exonuclease V (RecBCD complex), gamma chain | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TCTGCCCCGGCTGGCGACAGGCAATGACTCTGTCGGCAAGCTGCTGCATCTCCTGGCACTGTGTTTCCCAGAAAATTTCACCAAAAGCGCCATACGGTAAATCCCCTGCCGCTCGGAAGCGGCGGAACAAGCGTTCGGCATCATCCTGCTCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP012306/2470146‑2470298‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcaaTCAGCAGTTATTGAATGCACTGGTTGAGCAGGATGATGCCGAACGCTTGTTCCGCCGCTTCCGAGCGGCAGGGGATTTACCGTATGGCGC‑TTTTGGTGAAATTTTCTGGGAAACACAGTGCCAGGAGATGCAGCAGCTTGCCGACAGAG < AP012306/2470321‑2470173 TCTGCCCCGGCTGGCGACAGGCAATGACTCTGTCGGCAAGCTGCTGCATCTCCTGGCACTGTGTTTCCCAGAAAATTTCACCAAAAGCGCCATACGGTAAATCCCCTGCCGCTCGGAAGCGGCGGAACAAGCGTTCGGCATCATCCTGCT > 2:935970/1‑150TCTGCCCCGGCTGGCGACAGGCAATGACTCTGTCGGCAAGCTGCTGCATCTCCTGGCACTGTGTTTCCCAGAAAATTTCACCAAAAGCGCCATACGGTAAATCCCCTGCCGCTCGGAAGCGGCGGAACAAGCGTTCGGCATCATCCTGCT < 1:1074702/150‑1 ccGCCCCGGCTGGCGACAGCCAATGACTCTGTCGGCAAGCTGCTGCATCTCCTGGCACTGTGTTTCCCAGAAAATTTCACCAAAAGCGCCATACGGTAAATCCCCTGCCGCTCGGAAGCGGCGGAACAAGCGTTCGGCATCATCCTGCTC < 2:2296867/148‑1 CTGCCCCGGCTGGCGACAGGCAATGACTCTGTCGGCAAGCTGCTGCATCTCCTGGCACTGTGTTTCCCAGAAAATTTCACCAAAAGCGCCATACGGTAAATCCCCTGCCGCTCGGAAGCGGCGGAACAAGCGTTCGGCATCATCCTGCTC < 2:957912/150‑1 CTGCCCCGGCTGGCGACAGGCAATGACTCTGTCGGCAAGCTGCTGCATCTCCTGGCACTGTGTTTCCCAGAAAATTTCACCAAAAGCGCCATACGGTAAATCCCCTGCCGCTCGGAAGCGGCGGAACAAGCGTTCGGCATCATCCTGCTC < 1:390287/150‑1 CTGCCCCGGCTGGCGACAGGCAATGACTCTGTCGGCAAGCTGCTGCATCTCCTGGCACTGTGTTTCCCAGAAAATTTCACCAAAAGCGCCATACGGTAAATCCCCTGCCGCTCGGAAGCGGCGGAACAAGCGTTCGGCATCATCCTGCTC > 2:3129321/1‑150 TGCCCCGGCTGGCGACAGGCAATGACTCTGTCGGCAAGCTGCTGCATCTCCTGGCACTGTGTTTCCCAGAAAATTTCACCAAAAGCGCCATACGGTAAATCCCCTGCCGCTCGGAAGCGGCGGAACAAGCGTTCGGCATCATCCTGCTCA < 1:940450/150‑1 TGCCCCGGCTGGCGACAGGCAATGACTCTGTCGGCAAGCTGCTGCATCTCCTGGCACTGTGTTTCCCAGAAAATTTCACCAAAAGCGCCATACGGTAAATCCCCTGCCGCTCGGAAGCGGCGGAACAAGCGTTCGGCATCATCCTGCTCA > 2:300315/1‑150 TGCCCCGGCTGGCGACAGGCAATGACTCTGTCGGCAAGCTGCTGCATCTCCTGGCACTGTGTTTCCCAGAAAATTTCACCAAAAGCGCCATACGGTAAATCCCCTGCCGCTCGGAAGCGGCGGAACAAGCGTTCGGCATCATCCTGCTCA < 1:2648612/150‑1 GCCCCGGCTGGCGACAGGCAATGACTCTGTCGGCAAGCTGCTGCATCTCCTGGCACTGTGTTTCCCAGAAAATTTCACCAAAAGCGCCATACGGTAAATCCCCTGCCGCTCGGAAGCGGCGGAACAAGCGTTCGGCATCATCCTGCTCAA > 1:269138/1‑150 GCCCCGGCTGGCGACAGGCAATGACTCTGTCGGCAAGCTGCTGCATCTCCTGGCACTGTGTTTCCCAGAAAATTTCACCAAAAGCGCCATACGGTAAATCCCCTGCCGCTCGGAAGCGGCGGAACAAGCGTTCGGCATCATCCTGCTCAA > 1:1708489/1‑150 GCCCCGGCTGGCGACAGGCAATGACTCTGTCGGCAAGCTGCTGCATCTCCTGGCACTGTGTTTCCCAGAAAATTTCACCAAAAGCGCCATACGGTAAATCCCCTGCCGCTCGGAAGCGGCGGAACAAGCGTTCGGCATCATCCTGCTCAA < 1:3995029/150‑1 GCCCCGGCTGGCGACAGGCAATGACTCTGTCGGCAAGCTGCTGCATCTCCTGGCACTGTGTTTCCCAGAAAATTTCACCAAAAGCGCCATACGGTAAATCCCCTGCCGCTCGGAAGCGGCGGAACAAGCGTTAGGCATCATCCTGCTCAA > 1:1188734/1‑150 CCGGCTGGCGACAGGCAATGGCCCGGCCGGCAAGCCGCTGCATCTCCCGGCACTGCGTTCCCCAGAAAATTTCACCAAAAGCGCCATCCGGTAACTCCCCTGCCGCTCGGAAGCGGCGGAACAAGCGTTCGGCATCATCGTGCTCAAACA < 2:2547488/150‑1 CGGTAAATCCCCTGCCGCTCGGAAGCGGCGGAACAAGCGTTCGGCATCATCCTGCTCAATCAGCAGTTATTGAATGCACTGGTTGAGCAGGATGATGCCGAACGCTTGTTCCGCCGCTTCCGAGCGGCAGGGGATTTACCGTATGGCGC‑T > 2:3045087/1‑150 CCGCTCGGAAGCGGCGGAACAAGCGTTCGGCATCATCCTGCTCAATCAGCAGTTATTGAATGCACTGGTTGAGCAGGATGATGCCGAACGCTTGTTCCGCCGCTTCCGAGCGGCAGGGGGTTTTCCGTATGGCGC‑TTTTTGTGGAATTTT > 2:184088/1‑150 AGCGGCGGAACAAGCGTTCGGCATCATCCTGCTCAATCAGCAGTTATTGAATGCACTGGTTGAGCAGGATGATGCCGAACGCTTGTTCCGCCGCTTCCGAGCGGCAGGGGGGTTTCCGGATGGGGCTTTTTGGGGAAATTTTTGGGGAAA > 2:3752984/1‑150 GGCGGAACAAGCGTTCGGCATCATCCTGCTCAATCAGCAGTTATTGAATGCACTGGTTGAGCAGGATGATGCCGAACGCTTGTTCCGCCGCTTCCGAGCGGCAGGGGATTTACCGTATGGCGC‑TTTTGGTGAAATTTTCTGGGAAACACA > 2:4017702/1‑150 CGGAACAAGCGTTCGGCATCATCCTGCTCAATCAGCAGTTATTGAATGCACTGGTTGAGCAGGATGATGCCGAACGCTTGTTCCGCCGCTTCCGAGCGGCAGGGGATTTACCGTATGGCGC‑TTTTGGTGAAATTTTCTGGGAAACACAGT < 1:4017702/150‑1 CAAGCGTTCGGCATCATCCTGCTCAATCAGCAGTTATTGAATGCACTGGTTGAGCAGGATGATGCCGAACGCTTGTTCCGCCGCTTCCGAGCGGCAGGGGATTTACCGTATGGCGC‑TTTTGGTGAAATTTTCTGGGAAACACAGTGCCAG < 1:3752984/150‑1 TCAATCAGCAGTTATTGAATGCACTGGTTGAGCAGGATGATGCCGAACGCTTGTTCCGCCGCTTCCGAGCGGCAGGGGATTTACCGTATGGCGC‑TTTTGGTGAAATTTTCTGGGAAACACAGTGCCAGGAGATGCAGCAGCTTGCCGACA > 2:2878302/1‑150 TCAATCAGCAGTTATTGAATGCACTGGTTGAGCAGGATGATGCCGAACGCTTGTTCCGCCGCTTCCGAGCGGCAGGGGATTTACCGTATGGCGC‑TTTTGGTGAAATTTTCTGGGAAACACAGTGCCAGGAGATGCAGCAGCTTGCCGACA < 1:2108829/150‑1 TCAATCAGCAGTTATTGAATGCACTGGTTGAGCAGGATGATGCCGAACGCTTGTTCCGCCGCTTCCGAGCGGCAGGGGATTTACCGTATGGCGC‑TTTTGGTGAAATTTTCTGGGAAACACAGTGCCAGGAGATGCAGCAGCTTGCCGACA > 1:1622431/1‑150 CAATCAGCAGTTATTGAATGCACTGGTTGAGCAGGATGATGCCGAACGCTTGTTCCGCCGCTTCCGAGCGGCAGGGGATTTACCGTATGGCGC‑TTTTGGTGAAATTTTCTGGGAAACACAGTGCCAGGAGATGCAGCAGCTTGCCGACAG > 1:552084/1‑150 CAATCAGCAGTTATTGAATGCACTGGTTGAGCAGGATGATGCCGAACGCTTGTTCCGCCGCTTCCGAGCGGCAGGGGATTTACCGTATGGCGC‑TTTTGGTGAAATTTTCTGGGAAACACAGTGCCAGGAGATGCAGCAGCTTGCCGACAG > 1:2774352/1‑150 CAATCAGCAGTTATTGAATGCACTGGTTGAGCAGGATGATGCCGAACGCTTGTTCCGCCGCTTCCGAGCGGCAGGGGATTTACCGTATGGCGC‑TTTTGGTGAAATTTTCTGGGAAACACAGTGCCAGGAGATGCAGCAGCTTGCCGACAG < 1:2418625/150‑1 CAATCAGCAGTTATTGAATGCACTGGTTGAGCAGGATGATGCCGAACGCTTGTTCCGCCGCTTCCGAGCGGCAGGGGATTTACCGTATGGCGC‑TTTTGGTGAAATTTTCTGGGAAACACAGTGCCAGGAGATGCAGCAGCTTGCCGACAG > 1:1076055/1‑150 AATCAGCAGTTATTGAATGCACTGGTTGAGCAGGATGATGCCGAACGCTTGTTCCGCCGCTTCCGAGCGGCAGGGGATTTACCGTATGGCGC‑TTTTGGTGAAATTTTCTGGGAAACACAGTGCCAGGAGATGCAGCAGCTTGCCGACAGA < 2:1146324/150‑1 AATCAGCAGTTATTGAATGCACTGGTTGAGCAGGATGATGCCGAACGCTTGTTCCGCCGCTTCCGAGCGGCAGGGGATTTACCGTATGGCGC‑TTTTGGTGAAATTTTCTGGGAAACACAGTGCCAGGAGATGCAGCAGCTTGCCGACAGA < 1:2818608/150‑1 AATCAGCAGTTATTGAATGCACTGGTTGAGCAGGATGATGCCGAACGCTTGTTCCGCCGCTTCCGAGCGGCAGGGGATTTACCGTATGGCGC‑TTTTGGTGAAATTTTCTGGGAAACACAGTGCCAGGAGATGCAGCAGCTTGCCGACAGA < 2:3415162/150‑1 AATCAGCAGTTATTGAATGCACTGGTTGAGCAGGATGATGCCGAACGCTTGTTCCGCCGCTTCCGAGCGGCAGGGGATTTACCGTATGGCGC‑TTTTGGTGAAATTTTCTGGGAAACACAGTGCCAGGAGATGCAGCAGCTTGCCGACAGA > 2:3606039/1‑150 AATCAGCAGTTATTGAATGCACTGGTTGAGCAGGATGATGCCGAACGCTTGTTCCGCCGCTTCCGAGCGGCAGGGGATTTACCGTATGGCGC‑TTTTGGTGAAATTTTCTGGGAAACACAGTGCCAGGAGATGCAGCAGCTTGCCGACAGA > 1:1089198/1‑150 AATCAGCAGTTATTGAATGCACTGGTTGAGCAGGATGATGCCGAACGCTTGTTCCGCCGCTTCCGAGCGGCAGGGGATTTACCGTATGGCGC‑TTTTGGTGAAATTTTCTGGGAAACACAGTGCCAGGAGATGCAGCAGCATGCCGACAGA > 1:4247517/1‑150 ATCAGCAGTTATTGAATGCACTGGTTGAGCAGGATGATGCCGAACGCTTGTTCCGCCGCTTCCGAGCGGCAGGGGATTTACCGTATGGCGC‑TTTTGGTGAAATTTTCTGGGAAACACAGTGCCAGGAGATGCAGCAGCTTGCCGACAGAG > 1:2701231/1‑150 ATCAGCAGTTATTGAATGCACTGGTTGAGCAGGATGATGCCGAACGCTTGTTCCGCCGCTTCCGAGCGGCAGGGGATTTACCGTATGGCGC‑TTTTGGTGAAATTTTCTGGGAAACACAGTGCCAGGAGATGCAGCAGCTTGCCGACAGAG > 1:112776/1‑150 TCTGCCCCGGCTGGCGACAGGCAATGACTCTGTCGGCAAGCTGCTGCATCTCCTGGCACTGTGTTTCCCAGAAAATTTCACCAAAAGCGCCATACGGTAAATCCCCTGCCGCTCGGAAGCGGCGGAACAAGCGTTCGGCATCATCCTGCTCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP012306/2470146‑2470298‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcaaTCAGCAGTTATTGAATGCACTGGTTGAGCAGGATGATGCCGAACGCTTGTTCCGCCGCTTCCGAGCGGCAGGGGATTTACCGTATGGCGC‑TTTTGGTGAAATTTTCTGGGAAACACAGTGCCAGGAGATGCAGCAGCTTGCCGACAGAG < AP012306/2470321‑2470173 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |