Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | AP012306 | 406,677 | 0 | A | G | 22.2% | 517.0 / 18.2 | 199 | K294E (AAA→GAA) | hemH | ferrochelatase |
Reads supporting (aligned to +/- strand): ref base A (37/117); new base G (44/0); total (82/117) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 6.57e-22 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
Only 100 of 236 total aligned reads displayed.
TGCCTTATACCGACGAAACGCTGAAAATGCTCGGAGAAAAAGGCGTAGGTCATATTCAGGTGATGTGCCCGGGCTTTGCTGCGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑AAAAAATATGAATAT‑ATTCCGGCGCTTAATGCCACGCCGGAACATATCGAAATGATGGCTAATCTTGTTGCCGCGTATCGCTAAAGCTGAGCGGTAAAGAACTGAGCGCCGTCGCGAAGAGCCTCGTCGGCGGTTTTCATCATCCGTGA > AP012306/406528‑406825 | tataCCGACGAAACGCTGAAAATGCTCGGAGAAAAAGGCGTAGGTCATATTCAGGTGATGTGCCCGGGCTTTGCTGCGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑gaaaaa > 2:2912113/1‑150 (MQ=255) ccGACGAAACGCTGAAAAAGCTCGGAAAAAAAGGCGTAGGTCATATTCAGGTGATGTGCCCGGGCTTTGCTGCGGATTGTCTGGGGGCGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑AAAAAATATg < 2:832742/150‑1 (MQ=255) cgacgaAACGCTGAAAATGCTCGGAGAAAAAGGCGTAGGTCATATTCAGGTGATGTGCCCGGGCTTTGCTGCGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑aaaaaaaaaga > 2:3688016/1‑145 (MQ=255) gacgaAACGCTGAAAATGCTCGGAGAAAAAGGCGTAGGTCATATTCAGGTGATGTGCCCGGGCTTTGCTGCGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑aaaaaaaaaaaa > 2:1034507/1‑144 (MQ=255) gacgaAACGCTGAAAATGCTCGGAGAAAAAGGCGTAGGTCATATTCAGGTGATGTGCCCGGGCTTTGCTGCGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑GAAAAAAATGaa > 2:2408315/1‑150 (MQ=255) acgaAACGCTGAAAATGCTCGGAGAAAAAGGCGTAGGTCATATTCAGGTGATGTGCCCGGGCTTTGCTGCGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑GAAAAATAAGAat > 1:2535222/1‑150 (MQ=255) cgaAACGCTGAAAATGCTCGGAGAAAAAGGCGTAGGTCATATTCAGGTGATGTGCCCGGGCTTTGCTGCGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑GAAAAATATTAata > 1:1308826/1‑150 (MQ=255) cgaAACGCTGAAAATGCTCGGAGAAAAAGGCGTAGGTCATATTCAGGTGATGTGCCCGGGCTTTGCTGCGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑GAAAAATATGAata > 1:956155/1‑150 (MQ=255) cgaAACGCTGAAAATGCTCGGAGAAAAAGGCGTAGGTCATATTCAGGTGATGTGCCCGGGCTTTGCTGCGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑GAAAAAAATGAata > 1:1916125/1‑150 (MQ=255) cgaAACGCTGAAAATGCTCGGAGAAAAAGGCGTAGGTCATATTCAGGTGATGTGCCCGGGCTTTGCTGCGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑AAAAAATATGAata > 1:3340821/1‑150 (MQ=255) cgaAACGCTGAAAATGCTCGGAGAAAAAGGCGTAGGTCATATTCAGGTGATGTGCCCGGGCTTTGCTGCGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑AAAAAATATGAata < 2:1673604/150‑1 (MQ=255) cgaAACGCTGAAAATGCTCGGAGAAAAAGGCGTAGGTCATATTCAGGTGATGTGCCCGGGCTTTGCTGCGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑AAAAAATATGAata < 2:910211/150‑1 (MQ=255) gaAACGCTGAAAATGCTCGGAGAAAAAGGCGTAGGTCATATTCAGGTGATGTGCCCGGGCTTTGCTGCGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑GAAAAATATGaaaaa > 2:3953013/1‑147 (MQ=255) gaAACGCTGAAAATGCTCGGAGAAAAAGGCGTAGGTCATATTCAGGTGATGTGCCCGGGCTTTGCTGCGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑GAAAAAAATGAaaat > 2:2649615/1‑150 (MQ=255) gaAACGCTGAAAATGCTCGGAGAAAAAGGCGTAGGTCATATTCAGGTGATGTGCCCGGGCTTTGCTGCGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑AATAAATATGAatat < 2:4276386/150‑1 (MQ=255) gaAACGCTGAAAATGCTCGGAGAAAAAGGCGTAGGTCATATTCAGGTGATGTGCCCGGGCTTTGCTGCGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑AAAAAATATGAatat < 2:3271817/150‑1 (MQ=255) aaaCGCTGAAAATGCTCGGAGAAAAAGGCGTAGGTCATATTCAGGTGATGTGCCCGGGCTTTGCTGCGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑AAAAAATATGAatat‑a < 2:2580723/150‑1 (MQ=255) aaaCGCTGAAAATGCTCGGAGAAAAAGGCGTAGGTCATATTCAGGTGATGTGCCCGGGCTTTGCTGCGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑AAAAAATATGAatat‑a < 1:1954676/150‑1 (MQ=255) aaCGCTGAAAATGCTCGGAGAAAAAGGCGTAGGTCATATTCAGGTGATGTGCCCGGGCTTTGCTGCGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑AAAAAATATGAatat‑at < 2:2372001/150‑1 (MQ=255) cTGAAAATGCTCGGAGAAAAAGGCGTAGGTCATATTCAGGTGATGTGCCCGGGCTTTGCTGCGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑AAAAAATATGAATAT‑ATTCCg < 2:1394587/150‑1 (MQ=255) tGAAAATGCTCGGAGAAAAAGGCGTAGGTCATATTCAGGTGATGTGCCCGGGCTTTGCTGCGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑GAAAAATATAAATAT‑Atttcag > 1:735845/1‑146 (MQ=255) aaaaTGCTCGGAGAAAAAGGCGTAGGTCATATTCAGGTGATGTGCCCGGGCTTTGCTGCGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑GAAAAATATGAATAT‑ATTCCcgcg > 1:817601/1‑150 (MQ=255) aaTGCTCGGAGAAAAAGGCGTAGGTCATATTCAGGTGATGTGCCCGGGCTTTGCTGCGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑AAAAAATATGAATAT‑ATTCCGGCGCt < 1:1202983/150‑1 (MQ=255) aTGCTCGGAGAAAAAGGCGTAGGTCATATTCAGGTGATGTGCCCGGGCTTTGCTGCGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑AAAAAATATGAATAT‑ATTCCGGCGCtt < 1:3564572/150‑1 (MQ=255) tGCTCGGAGAAAAAGGCGTAGGTCATATTCAGGTGATGTGCCCGGGCTTTGCTGCGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGCGGGG‑AAAAAAAATAAAAAA‑TTTACGGCGCtc > 2:2084508/1‑149 (MQ=255) tGCTCGGAGAAAAAGGCGTAGGTCATATTCAGGTGATGTGCCCGGGCTTTGCTGCGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑GAAAAAAATTAATAT‑ATTTCCGCGCCTa > 1:101576/1‑150 (MQ=255) gCTCGGAGAAAAAGGCGTAGGTCATATTCAGGTGATGTGCCCGGGCTTTGCTGCGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑GAAAAAAATTAAAATAATTCGGGGGCTTa > 1:4354752/1‑150 (MQ=255) gCTCGGAGAAAAAGGCGTAGGTCATATTCAGGTGATGTGCCCGGGCTTTGCTGCGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑AAAAAATATGAATAT‑ATTCCGGCGCTTaa < 2:2201971/150‑1 (MQ=255) cTCGGAGAAAAAGGCGTAGGTCATATTCAGGTGATGTGCCCGGGCTTTGCTGCGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑AAAAAATATGAATAT‑ATTCCGGCGCTTAAt < 1:3194548/150‑1 (MQ=255) cGGAGAAAAAGGCGTAGGTCATATTCAGGTGATGTGCCCGGGCTTTGCTGCGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑AAAAAATATGAATAT‑ATTCCGGCGCTTAATGc < 2:2664283/150‑1 (MQ=255) cGGAGAAAAAGGCGTAGGTCATATTCAGGTGATGTGCCCGGGCTTTGCTGCGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑AAAAAATATGAATAT‑ATTCCGGCGCTTAATGc < 2:2707005/150‑1 (MQ=255) ggAGAAAAAGGCGTAGGTCATATTCAGGTGATGTGCCCGGGCTTTGCTGCGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑GAAAAAAATGAATAT‑ATTCCGGCGCCTTATGcc > 1:2408376/1‑150 (MQ=255) gagaAAAAGGCGTAGGTCATATTCAGGTGATGTGCCCGGGCTTTGCTGCGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑AAAAAATATGAATAT‑ATTCCGGCGCTTAATGCCa < 2:3792301/150‑1 (MQ=255) aaaGGCGTAGGTCATATTCAGGTGATGTGCCCGGGCTTTGCTGCGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑GAAAAATATGAATAT‑ATTTCCGCGCTTAATTCCACGccc > 1:2026499/1‑149 (MQ=255) aaaGGCGTAGGTCATATTCAGGTGATGTGCCCGGGCTTTGCTGCGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑AAAAAATATGAATAT‑ATTCCGGCGCTTAATTCCACGCCg > 2:1066689/1‑150 (MQ=255) aaGGCGTAGGTCATATTCAGGTGATGTGCCCGGGCTTTGCTGCGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑AAAAAATATGAATAT‑ATTCCGGCGCTTAATGCCACGCCgg < 1:1305808/150‑1 (MQ=255) ggCGTAGGTCATATTCAGGTGATGTGCCCGGGCTTTGCTGCGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑GAAAAAAAAGAAAAA‑ATTTCCGCGCCTAATTCCCCCCCggga > 2:1498631/1‑148 (MQ=255) ggCGTAGGTCATATTCAGGTGATGTGCCCGGGCTTTGCTGCGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑AAAAAATATGAATAT‑ATTTCCGCGCCTAATGCCACGCCGGaa > 1:3072387/1‑150 (MQ=255) ggCGTAGGTCATATTCAGGTGATGTGCCCGGGCTTTGCTGCGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑AAAAAATATGAATAT‑ATTCCGGCGCTTAATGCCACGCCGGaa < 1:2632427/150‑1 (MQ=255) aGGTCATATTCAGGTGATGTGCCCGGGCTTTGCTGCGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑GAAAAATATTAATAT‑ATTTCCGCGCTTTATGCCACACCGGGACatat > 1:3117713/1‑150 (MQ=255) aGGTCATATTCAGGTGATGTGCCCGGGCTTTGCTGCGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑GAAAAAAATGAATAT‑ATTTCGGCGCTTAATGCCACGCCCGGACatat > 1:994800/1‑150 (MQ=255) aGGTCATATTCAGGTGATGTGCCCGGGCTTTGCTGCGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑GAAAAAAATGAATAA‑ATTCCGGCGCTTAATGCCACGCCGGAACatat > 1:1542065/1‑150 (MQ=255) aGGTCATATTCAGGTGATGTGCCCGGGCTTTGCTGCGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑AAAAAATATGAATAT‑ATTCCGGCGCTTAATGCCACGCCGGAACatat < 1:399153/150‑1 (MQ=255) ggTCATATTCAGGTGATGTGCCCGGGCTTTGCTGCGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑GGAAAATATGAATAT‑ATTCCGGCGCTTAATTCCCCGCCCGAACATATc > 1:3439051/1‑150 (MQ=255) ggTCATATTCAGGTGATGTGCCCGGGCTTTGCTGCGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑GAAAAAAATGAAAAT‑ATTTTGGGGCTTAATGCCACGCCGGGACATATc > 2:3423731/1‑150 (MQ=255) ggTCATATTCAGGTGATGTGCCCGGGCTTTGCTGCGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGACTTCCTCGGTGCCGGC‑GGG‑AGAAAACAAGAAATA‑ATTCCCGCGCTTCATGCCCCCCCGGAAcccatc > 2:1762316/1‑145 (MQ=255) cATATTCAGGTGATGTGCCCGGGCTTTGCTGCGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑AAAAAATATGAATAT‑ATTCCGGCGCTTAATGCCACGCCGGAACATATCGaa < 1:3856180/150‑1 (MQ=255) atatTCAGGTGATGTGCCCGGGCTTTGCTGCGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑AAAAAATATGAATAT‑ATTCCGGCGCTTAATGCCACGCCGGAACATATCGaaa < 2:531680/150‑1 (MQ=255) tatTCAGGTGATGTGCCCGGGCTTTGCTGCGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑AAAAAATATGAATAT‑ATTTCCGCGCTTAATGCCACGCCGGGACATATCGAAat > 1:458180/1‑150 (MQ=255) atTCAGGTGATGTGCCCGGGCTTTGCTGCGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑AAAAAAAATGAAAAT‑ATTTCGGCGCTTAAAGCCCCGCCGGGACATATCGAAatt > 2:334712/1‑149 (MQ=255) ttCAGGTGATGTGCCCGGGCTTTGCTGCGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑AAAAAATAAGAATAT‑ATTACCGCGCCTAATGCCACGCCCGGGCATATCTTAatga > 1:1638201/1‑150 (MQ=255) tCAGGTGATGTGCCCGGGCTTTGCTGCGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑AAAAAAAATTAATAT‑ATTTCCGCGCTTAATGCCACCCCGGAACATATCCGAatgat > 1:3968497/1‑150 (MQ=255) aGGTGATGTGCCCGGGCTTTGCTGCGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑AAAAAATATGAATAT‑ATTCCCGCGCCTCATGCCACGCCGGAACATATCGAAATGATgg > 1:2998614/1‑150 (MQ=255) tGATGTGCCCGGGCTTTGCTGCGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑AAAAAATATGAATAT‑ATTCCGGCGCTTAATGCCACGCCGGAACATATCGAAATGATGGCTa < 1:3722852/150‑1 (MQ=255) aTGTGCCCGGGCTTTGCTGCGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑AAAAAATATGAATAT‑ATTCCGGCGCTTAATGCCACGCCGGAACATATCGAAATGATGGCTAAt < 2:1900407/150‑1 (MQ=255) tgCCCGGGCTTTGCTGCGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑AAAAAATATGAATAT‑ATTCCGGCGCTTAATGCCACGCCGGAACATATCGAAATGATGGCTAATCtt < 2:2822050/150‑1 (MQ=255) gCCCGGGCTTTGCTGCGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑AAAAAATATGAATAT‑ATTCCGGCGCTTAATGCCACGCCGGAACATATCGAAATGATGGCTAATCttg < 1:4210729/150‑1 (MQ=255) gCCCGGGCTTTGCTGCGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑AAAAAATATGAATAT‑ATTCCGGCGCTTAATGCCACGCCGGAACATATCGAAATGATGGCTAATCttg < 1:3348687/150‑1 (MQ=255) cccGGGCTTTGCTGCGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑AAAAAATATGAATAT‑ATTCCGGCGCTTAATGCCACGCCGGAACATATCGAAATGATGGCTAATCttgt < 2:3099071/150‑1 (MQ=255) ccGGGCTTTGCTGCGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑AAAAAATATGAATAT‑ATTCCGGCGCTTAATGCCACGCCGGAACATATCGAAATGATGGCTAATCttgtt < 1:3314802/150‑1 (MQ=255) gCTTTGCTGCGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑GAAAAATATGAATAT‑ATTTCGGCGCCTAATGCCACGCCGGGACATATCGAAATGATGGCTAATCTTGTTGCcg > 2:632338/1‑150 (MQ=255) ttGCTGCGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑GAAAAAAATGAATAT‑ATTTCGGCGCTTTATGCCACGCCGGGACATATCGAAAAGATGGCTAATCTTTTTTCCGCGt > 2:4201754/1‑150 (MQ=255) gctgcGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑AAAAAAAATGAATAT‑ATTTCCGCGGCTCATTACCCGCCGGGACATATCGAAATGATAGGTAAACTTTTTGCCGCGTAt > 2:2122445/1‑150 (MQ=255) tgcGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑AAAAAATATGAATAT‑ATTCCGGCGCTTAATGCCACGCCGGAACATATCGAAATGATGGCTAATCTTGTTGCCGCGTATCg < 2:350883/150‑1 (MQ=255) gcGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑GAAAAAAATGAATAT‑ATTTCGGCGCTTAATGCCACGCCGGGAAAAAACGAAATGATGGCTAATCTTGTTGCCGCGGATCGc > 2:6850/1‑150 (MQ=255) ggATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑AAAAAATATGAATAT‑ATTTCGGCGCTTAATTCCACGCCGGAACATATCGAAAAGATGGCTAATCTTGTTGTCGCGGATCGCTa > 2:321833/1‑150 (MQ=255) cTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑AAAAAATATGAATAT‑ATTCCGGCGCTTAATGCCACGCCGGAACATATCGAAATGATGGCTAATCTTGTTGCCGCGTATCGCTAAAGCTGa < 2:562847/150‑1 (MQ=255) tGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑AAAAAAAATGAATAT‑ATTCCGGCGCTTAATGCCACCCCGGAACATATCGAAATGATGGCTAATCTTGTTGCCGCGTATCGCTAAAGCTGaa > 1:1327880/1‑149 (MQ=255) ggAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑AAAAAATATGAATAT‑ATTCCGGCGCTTAATGCCACGCCGGAACATATCGAAATGATGGCTAATCTTGTTGCCGCGTATCGCTAAAGCTGAGc < 2:1602457/150‑1 (MQ=255) gagaCGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑AAAAAATATGAATAT‑ATTCCGGCGCTTAATGCCACGCCGGAACATATCGAAATGATGGCTAATCTTGTTGCCGCGTATCGCTAAAGCTGAGCg < 1:4150425/150‑1 (MQ=255) agaCGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑GAAAAAAATGAATAT‑ATTTCGGCGCTTAATTCCACCCCGGGACAAATCGAAATGATGGGTAAACTTTTTTCCGCGGATCGCCAAAACTGAGCgg > 2:2002789/1‑150 (MQ=255) cGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑AAAAAATATGAATAT‑ATTCCGGCGCTTAATGCCACGCCGGAACTTATCGAAATGATGGCTAATCTTGTTGCCGCGTATCGCTAAAGCTGAGCGGTaa < 1:269465/150‑1 (MQ=255) gCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑AAAAAATATGAATAT‑ATTCCGGCGCTTAATGCCACGCCGGAACATATCGAAATGATGGCTAATCTTGTTGCCGCGTATCGCTAAAGCTGAGCGGTaaa < 1:1874543/150‑1 (MQ=255) gCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑AAAAAATATGAATAT‑ATTCCGGCGCTTAATGCCACGCCGGAACATATCGAAATGATGGCTAATCTTGTTGCCGCGTATCGCTAAAGCTGAGCGGTaaa < 1:2773415/150‑1 (MQ=255) ggAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑AAAAAATATGAATAT‑ATTCCGGCGCTTAATGCCACGCCGGAACATATCGAAATGATGGCTAATCTTGTTGCCGCGTATCGCTAAAGCTGAGCGGTAAAGaa < 1:2573982/150‑1 (MQ=255) gAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑AAAAAATATGAATAT‑ATTTCGGCGCTTAATGCCACCCCCGGACATATCGGAATAATGGCTAATCTTGTTGCCGCGTATCGCTAAAACTGCGCGGTAAAGAAc > 2:2258515/1‑150 (MQ=255) aaGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑AAAAAAAATGAATAT‑ATTCCGGCGCTTGATGCCACGCCGGAACATATCGAAATGATGGCTAATCTTGTTGCCGCGGATCGCTAAAGCTGAGCGGGAAAGaaat > 2:3500628/1‑148 (MQ=255) agagATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑AAAAAATATGAATAT‑ATTCCGGCGCTTAATGCCACGCCGGAACATATCGAAATGATGGCTAATCTTGTTGCCGCGTATCGCTAAAGCTGAGCGGTAAAGAACTg < 1:1980017/150‑1 (MQ=255) agaTTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑AAAAAAAATGAATAT‑ATTCCGGCGCTTAATGCCACGCCGGAACATATCGAAATGATGGCTAATCTTGTTGCCGCGTATCGCTAAAGCTGAGCGGGAAAGAACTGAg > 1:1211678/1‑150 (MQ=255) gaTTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑AAAAAATATGAATAT‑ATTCCGGCGCTTAATGCCACGCCGGAACATATCGAAATGATGGCTAATCTTGTTGCCGCGTATCGCTAAAGCTGAGCGGTAAAGAACTGAgc < 2:3047962/150‑1 (MQ=255) ttGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑AAAAAATATGAATAT‑ATTCCGGCGCTTAATGCCACGCCGGAACATATCGAAATGATGGCTAATCTTGTTGCCGCGTATCGCTAAAGCTGAGCGGTAAAGAACTGAgcgc < 1:2503851/150‑1 (MQ=255) gCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑AAAAAATATGAATAT‑ATTCCGGCGCTTAATGCCACGCCGGAACATATCGAAATGATGGCTAATCTTGTTGCCGCGTATCGCTAAAGCTGAGCGGTAAAGAACTGAGCGCCg < 2:740726/150‑1 (MQ=255) ccGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑AAAAAATATGAATAT‑ATTCCGGCGCTTAATGCCACGCCGGAACATATCGAAATGATGGCTAATCTTGTTGCCGCGTATCGCTAAAGCTGAGCGGTAAAGAACTGAGCGCCGt < 2:1179150/150‑1 (MQ=255) cAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑AAAAAATATGAATAT‑ATTCCGGCGCTTAATGCCACGCCGGAACATATCGAAATGATGGCTAATCTTGTTGCCGCGTATCGCTAAAGCTGAGCGGTAAAGAACTGAGCGCCGTCGCGa < 2:3265724/150‑1 (MQ=255) tGAGGTCTTCCTCGGTGCCGGC‑GGG‑AAAAAATATGAATAT‑ATTCCGGCGCTTAATGCCACGCCGGAACATATCGAAATGATGGCTAATCTTGTTGCCGCGTATCGCTAAAGCTGAGCGGTAAAGAACTGAGCGCCGTCGCGAAGAGCCtc < 1:1929564/150‑1 (MQ=255) ggTCTTCCTCGGTGCCGGC‑GGG‑AAAAAATATGAATAT‑ATTCCGGCGCTTAATGCCACGCCGGAACATATCGAAATGATGGCTAATCTTGTTGCCGCGTATCGCTAAAGCTGAGCGGTAAAGAACTGAGCGCCGTCGCGAAGAGCCtcgtc < 2:1924534/150‑1 (MQ=255) tCTTCCTCGGTGCCGGC‑GGG‑AAAAAAAATGAATAT‑ATTTCGGCGCTTAATGCCCCGCCGGGACATATCGAAATGATGGCTAATCTTTTTGCCCCGTATCGCTAAAACTGAGCGGGAAAGAACTGAGCGCCGTCGTGAAAAGCCTCGTcgg > 2:4002728/1‑150 (MQ=255) tCTTCCTCGGTGCCGGC‑GGG‑AAAAAAAATGAAAAT‑ATTTCGGCGCTTAATTCCCCGCCGGGAAATATCGAAAAGATGGCTAATCTTTTTGCCGCGGATCGCCAAAACTGGGCGGGAAAAAAATGAGGGCCGTCGCGAAGAGccccttccg > 2:4117467/1‑143 (MQ=255) ccTCGGTGCCGGC‑GGG‑AAAAAATATGAATAT‑ATTCCGGCGCTTAATGCCACGCCGGAACATATCGAAATGATGGCTAATCTTGTTGCCGCGTATCGCTAAAGCTGAGCGGTAAAGAACTGAGCGCCGTCGCGAAGAGCCTCGTCGGCGGt < 1:2911306/150‑1 (MQ=255) ccTCGGTGCCGGC‑GGG‑AAAAAATATGAATAT‑ATTCCGGCGCTTAATGCCACGCCGGAACATATCGAAATGATGGCTAATCTTGTTGCCGCGTATCGCTAAAGCTGAGCGGTAAAGAACTGAGCGCCGTCGCGAAGAGCCTCGTCGGCGGt < 1:1554142/150‑1 (MQ=255) tCGGTGCCGGC‑GGG‑AAAAAATATGAATAT‑ATTCCGGCGCTTAATGCCACGCCGGAACATATCGAAATGATGGCTAATCTTGTTGCCGCGTATCGCTAAAGCTGAGCGGTAAAGAACTGAGCGCCGTCGCGAAGAGCCTCGTCGGCGGttt < 1:3828061/150‑1 (MQ=255) cGGTGCCGGC‑GGG‑AAAAAATATGAATAT‑ATTCCGGCGCTTAATGCCACGCCGGAACATATCGAAATGATGGCTAATCTTGTTGCCGCGTATCGCTAAAGCTGAGCGGTAAAGAACTGAGCGCCGTCGCGAAGAGCCTCGTCGGCGGtttt < 2:460739/150‑1 (MQ=255) gTGCCGGC‑GGG‑AAAAAATATGAATAT‑ATTCCGGCGCTTAATGCCACGCCGGAACATATCGAAATGATGGCTAATCTTGTTGCCGCGTATCGCTAAAGCTGAGCGGTAAAGAACTGAGCGCCGTCGCGAAGAGCCTCGTCGGCGGTTTtca < 2:4039633/150‑1 (MQ=255) gCCGGC‑GGG‑GAAAAAAATGAATAT‑ATTTCGGCGCTTAATTCCCCCCCGGGACATATCGAAATGATGGCTAATCTTGTTGCCGCGGATCGCTAAAGCTGAGCGGGAAAGAACTGAGCGCCGTCGCGAAGAGGCTCGTCGGCGGgttttttc > 2:2458561/1‑146 (MQ=255) ccGGG‑GGGAAAAAAATATAAATAT‑TTCCGGGCGTTAAATCCCACGCCGGAACATATCGAAATGATGGCTAATCTTGTTGCCGCGTATCGCTAAAGCTGAGCGGTAAAGAACTGAGCGCCGTCGCGAAGAGCCTCGTCGGCGGTTTtcatc < 1:2427875/150‑1 (MQ=255) cggc‑ggG‑AAAAAATATGAATAT‑ATTCCGGCGCTTAATGCCACGCCGGAACATATCGAAATGATGGCTAATCTTGTTGCCGCGTATCGCTAAAGCTGAGCGGTAAAGAACTGAGCGCCGTCGCGAAGAGCCTCGTCGGCGGTTTTcatcat < 1:4213627/150‑1 (MQ=255) cggc‑ggG‑AAAAAATATGAATAT‑ATTCCGGCGCTTAATGCCACGCCGGAACATATCGAAATGATGGCTAATCTTGTTGCCGCGTATCGCTAAAGCTGAGCGGTAAAGAACTGAGCGCCGTCGCGAAGAGCCTCGTCGGCGGGTTTcatcat > 1:2358703/1‑150 (MQ=255) gc‑ggG‑AAAAAATATGAATAT‑ATTCCGGCGCTTAATGCCACGCCGGAACATATCGAAATGATGGCTAATCTTGTTGCCGCGTATCGCTAAAGCTGAGCGGTAAAGAACTGAGCGCCGTCGCGAAGAGCCTCGTCGGCGGTTTTCATCATcc < 1:3618298/150‑1 (MQ=255) gc‑ggG‑AAAAAATATGAATAT‑ATTCCGGCGCTTAATGCCACGCCGGAACATATCGAAATGATGGCTAATCTTGTTGCCGCGTATCGCTAAAGCTGAGCGGTAAAGAACTGAGCGCCGTCGCGAAGAGCCTCGTCGGCGGTTTTCATCATcc > 1:1710261/1‑150 (MQ=255) ggg‑AAAAAATATGAATAT‑ATTCCGGCGCTTAATGCCACGCCGGAACATATCGAAATGATGGCTAATCTTGTTGCCGCGTATCGCTAAAGCTGAGCGGTAAAGAACTGAGCGCCGTCGCGAAGAGCCTCGTCGGCGGTTTTCATCATCCGt > 1:2134242/1‑150 (MQ=255) | TGCCTTATACCGACGAAACGCTGAAAATGCTCGGAGAAAAAGGCGTAGGTCATATTCAGGTGATGTGCCCGGGCTTTGCTGCGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGC‑GGG‑AAAAAATATGAATAT‑ATTCCGGCGCTTAATGCCACGCCGGAACATATCGAAATGATGGCTAATCTTGTTGCCGCGTATCGCTAAAGCTGAGCGGTAAAGAACTGAGCGCCGTCGCGAAGAGCCTCGTCGGCGGTTTTCATCATCCGTGA > AP012306/406528‑406825 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |