Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | AP012306 | 2,212,753 | 0 | A | C | 21.5% | 540.9 / 39.9 | 191 | Y241D (TAT→GAT) | hcaT | predicted 3‑phenylpropionic transporter |
Reads supporting (aligned to +/- strand): ref base A (147/3); new base C (0/41); total (147/44) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.37e-38 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
Only 100 of 248 total aligned reads displayed.
CAACGCCGTAGTTGCTCCCATAATGCCCCAGCGCACTACGCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTTCCG‑CCA‑CCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCACGCAGACCAACCGGT > AP012306/2212604‑2212900 | cAACGCCGTAGTTGCTCCCATAATGCCCCAGCGCACTACGCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTTCCG‑CCA‑CCACGCCCAGCGACCACAAATa > 1:3717898/1‑150 (MQ=255) aaCGCCGTAGTTGCTCCCATAATGCCCCAGCGCACTACGCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTTCCG‑CCA‑CCACGCCCAGCGACCACAAATAc > 1:536247/1‑150 (MQ=255) aGTTGCTCCCATAATGCCCCAGCGCACTACGCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTTCCG‑CCA‑CCACGCCCAGCGACCACAAATACCCCAccgc > 1:734421/1‑150 (MQ=255) aGTTGCTCCCATAATGCCCCAGCGCACTACGCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTTCCG‑CCA‑CCACGCCCAGCGACCACAAATACCCCAccgc > 1:577863/1‑150 (MQ=255) ttGCTCCCATAATGCCCCAGCGCACTACGCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTTCCG‑CCA‑CCACGCCCAGCGACCACAAATACCCCAccgccg > 1:1445237/1‑150 (MQ=255) cccATAATGCCCCAGCGCACTACGCCGCAAATCGCCGAGATCAACAGCATACCGCGTGCCCTACAACGGCGAAAAAGTTTATTACTCAGCGCAAAGATAATGACTCCCG‑CCA‑CCACGCCCAGCGACCACAAATCCCCCACCgccgaggcc < 2:159610/150‑1 (MQ=255) cATAATGCCCCAGCGCACTACGCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTTCCG‑CCA‑CCACGCCCAGCGACCACAAATACCCCACCgccgaggccga > 1:3011149/1‑150 (MQ=255) aTAATGCCCCAGCGCACTACGCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTTCCG‑CCA‑CCACGCCCAGCGACCACAAATCCCCCACCgccgaggccgag < 1:759708/150‑1 (MQ=255) aaTGCCCCAGCGCACTACGCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTTCCG‑CCA‑CCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTa > 1:3627643/1‑150 (MQ=255) ccccAGCGCACTACGCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTCCCG‑CCA‑CCACGCCCAGCGACCACAAATCCCCCACCGCCGAGGCCGAGTAGCCa < 2:3572363/150‑1 (MQ=255) gcACTACGCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGAAAAAGTTTATTCCTCAGCGAAAAGATAATGCCTCCCG‑CCC‑CCACGCCCAGCGACCACAAATCCCCCACCGCCGAGGCCGAGTAGCCAGctgcct < 2:2891414/150‑1 (MQ=255) cACTACGCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAAAGACTTCCG‑CCA‑CCACGCCCAGCGACCACAAATACCCCACCGCCGCAGCCAAGTAACCAcctgcctg > 2:202270/1‑150 (MQ=255) aCTACGCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTTCCG‑CCA‑CCACGCCCAGCGACCACAAATACCCCACCGCCCAGGCCGAGTATCCAGctgcctgc > 1:283929/1‑150 (MQ=255) cTACGCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTTCCG‑CCA‑CCACGCCCAGCGACCACAAATCCCCCACCGCCGAGGCCGAGTAGCCAGCtgcctgcc < 1:3355480/150‑1 (MQ=255) tccgccgcAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTTCCG‑CCA‑CCCCGCCCAGCGACCACAAATCCCCCCCCGCCGAGGCCGAGTAGCCAGCTGCCTGCCa < 2:3439679/148‑1 (MQ=255) cAAAGCGCCGAAATCAACAGCATACCGCGTGCACTACAACGGCGAAAAAGTTTATTCCCCAGCGAAAAAAAAATGACTCCCG‑CCC‑CCCCGCCCGGCGACCAAAAATCCCCCCCCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATg < 2:2295842/150‑1 (MQ=255) aaaTCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTTCCG‑CCA‑CCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATgg > 2:3475277/1‑150 (MQ=255) aaTCGCCGAGATCAACAGCATATCGCGTGGAAAAGAACGGGGGAAAAGGTTATTAATGAGCGCAAAGAAAATGAGTTCCG‑CCA‑ACAAGGCCAGCGGACACAAAAAACCCAACGGCGAGGGCGAGGAGGCAGCTGCCTGCCAGTAAATggg > 2:2169666/1‑149 (MQ=255) aTCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTTCCG‑CCA‑CCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGgcg > 2:219207/1‑150 (MQ=255) gCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTTCCG‑CCA‑CCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTa > 1:3568344/1‑150 (MQ=255) gCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTTCCG‑CCA‑CCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTa > 1:1722646/1‑150 (MQ=255) cGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGGTTATTACTCAGCGCAAAGATAATGACTTCCG‑CCA‑CCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTaaa > 1:3956631/1‑150 (MQ=255) agaTCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTTCCG‑CCA‑CCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAAc > 1:1838532/1‑150 (MQ=255) tCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTTCCG‑CCA‑CCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGt > 1:2402630/1‑150 (MQ=255) aaCAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTTCCG‑CCA‑CCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTaa > 1:3518543/1‑150 (MQ=255) aCAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTTCCG‑CCA‑CCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAAt > 1:79143/1‑150 (MQ=255) atatCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTTCCG‑CCA‑CCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGcc > 1:3402499/1‑150 (MQ=255) cgTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTTCCG‑CCA‑CCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCAtgt > 1:3413414/1‑150 (MQ=255) cgTGCACTACAACGGCGAAAAAGTTTATTACTCAGCGCAAAGATAATGACTTCCG‑CCA‑CCACGCCCAGCGACCACAAATCCCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCAtgt < 1:1124833/150‑1 (MQ=255) cgTCCACAACACGGGCGAAAAATTTTATTCCCCAGCGAAAAGAAAATGCCTCCCG‑CCC‑CCACCCCCAGCGACCAAAAATCCCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCAtgt < 2:1911447/150‑1 (MQ=255) gTGCACTACACCGGCGGAAAATTTTATTCCTCAGCGAAAAGAAAATGCCTCCCG‑CCC‑CCACGCCCAGCGACCAAAAATCCCCCCCCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCAtgtg < 2:2250643/150‑1 (MQ=255) gcccTACACCGGCGAAAAAGTTTATTACTCAGCGCAAAGATAATGACTCCCG‑CCC‑CCACGCCCAGCGACTACAAATCCCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGcc < 2:3405955/147‑1 (MQ=255) gCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTTCCG‑CCA‑CCACGCCCAGCGACCACAAATACCCCACCCCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGcc > 2:3706093/1‑150 (MQ=255) cACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTTCCG‑CCA‑CCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGccc > 2:527283/1‑150 (MQ=255) cACTAAAACGGGGAAAAGGTTTATAACTCAGCGAAAAAAAAAGGCCTCCCG‑CCC‑CCCCCCCCAGCGACCAAAAATCCCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGccc < 2:785844/150‑1 (MQ=255) aCTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTTCCG‑CCA‑CCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGcccc > 2:3853049/1‑150 (MQ=255) cTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTTCCG‑CCA‑CCACGCCCAGCGACCACAAATCCCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGccccc < 1:220195/150‑1 (MQ=255) tACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTTCCG‑CCA‑CCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCt > 1:865131/1‑150 (MQ=255) aCAACGGCGGCAAAATTTATTACTCAGCGCAAAGATAATGAATTCCG‑CCC‑CCCCGCCCTGCGCCCACAAATACCCCACCGCCGAGGCCGAGTAGCCTGCTGCCTGCCAGTAAATTGCGCTAAAACCGTAACAAGCCGCATGTGccccccg > 2:4097513/1‑148 (MQ=255) aCAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTTCCG‑CCA‑CCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTg > 1:2170937/1‑150 (MQ=255) aaCGGCGAAAAAGTTTATTCCCCAGCGCAAAGATAAGGACTTCCG‑CCC‑CCCCGCCCAGCGCCCAAAAATCCCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCa < 2:2691397/150‑1 (MQ=255) cggcggAAAATTTTATTCCCCAGCGAAAAGAAAATGACTCCCG‑CCA‑CCCCGCCCAGCGACCAAAAATCCCCCCCCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAAt < 2:2330423/150‑1 (MQ=255) cggcgaAAAATTTTATTCCTCAGCCAAAAGAAAATGACTCCCG‑CCC‑CCACCCCCAGCGACCACAAATCCCCCCCCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAAt < 2:163237/150‑1 (MQ=255) cggcgaAAAAGTTTATTACTCAGCGAAAAGAAAATGCCTCCCG‑CCC‑CCCCGCCCAGCGCCCACAAATCCCCCCCCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAAt < 2:1136836/150‑1 (MQ=255) ggcggAAAAGTTTATTACTCAGCGCAAAGATAATGACTTCCG‑CCA‑CCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATa > 1:3236617/1‑150 (MQ=255) gcggAAAAGTTTATTACTCAGCGCAAAGATAATGACTTCCG‑CCA‑CCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATaa > 2:1901823/1‑150 (MQ=255) gcggAAAAGTTTATTACTCAGCGCAAAGATAATGACTTCCG‑CCA‑CCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATaa > 2:1344839/1‑150 (MQ=255) cggAAAAGTTTATTACTCAGCGCAAAGATAATGACTTCCG‑CCA‑CCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATaaa > 2:1209540/1‑150 (MQ=255) aaaaaTTTTATTACTCAGCGCAAAGAAAATGACTCCCG‑CAC‑CCCCGCCCAGCGACAAAAAACCCCCCCCCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATaaaca < 2:2913265/149‑1 (MQ=255) aaaaaGTTTATTCCCCAGCGAAAAGAAAATGCCTCCCG‑CCC‑CCCCCCCAAGCGCCCAAAAATCCCCCCCCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATaaaca < 2:4015827/149‑1 (MQ=255) aaaaGTTTATTACTCAGCGCAAAGATAATGACTTCCG‑CCA‑CCACGCCCAGCGACCACAAATCCCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATaaacaa < 1:94208/150‑1 (MQ=255) aaaaGTTTATTACTCAGCGCAAAGATAATGACTTCCG‑CCA‑CCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATaaacaa > 1:1955700/1‑150 (MQ=255) aaaaGTTTATTACTCAGCGCAAAGATAATGACTTCCG‑CCA‑CCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATaaacaa > 2:2545867/1‑150 (MQ=255) aaaTTTTATTACTCAGCGAAAAGATAATGCCTCCCG‑CCA‑CCCCCCCCAGCGCCCAAAAATCCCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATaaacaaa < 2:2061059/150‑1 (MQ=255) aaaGTTTATTCCCCAGCGCAAAAATAAGGACTCCCG‑CCA‑CCCCGCCCAGCGACCAAAAATCCCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATaaacaaa < 2:1224773/150‑1 (MQ=255) aaaGTTTATTACTCAGCGCAAAGATAATGACTTCCG‑CCA‑CCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATaaacaaa > 2:977442/1‑150 (MQ=255) aaaGTTTATTACTCAGCGCAAAGATAATGACTTCCG‑CCA‑CCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATaaacaaa > 1:2963288/1‑150 (MQ=255) aaGTTTATTACCCAGCGAAAAGATAATGACTTCCG‑CCC‑CCCCGCCCAGCGACCACAAATCCCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATaaacaaac < 1:3373257/150‑1 (MQ=255) aGTTTATTACTCAGCGCAAAGATAATGACTTCCG‑CCA‑CCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACg > 2:3901355/1‑150 (MQ=255) aGTTTATTACTCAGCGCAAAGATAATGACTTCCG‑CCA‑CCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACg > 2:1689746/1‑150 (MQ=255) aGTTTATTACCCAGCAAAAAGAAAATGCCTCCCC‑CCC‑CCCCCCCCAGCGCCCAAAAACCCCCCCCCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACg < 2:3313591/150‑1 (MQ=255) gTTTATTCCTCAGCGCAAAAAAAATGCCTCCCG‑CCC‑CCACGCCCAGCGCCCAAAAATCCCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGc < 2:2804147/150‑1 (MQ=255) gTTTATTACTCAGCGCAAAGATAATGACTTCCG‑CCA‑CCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGc > 2:1399653/1‑150 (MQ=255) tttATTACTCAGCGCAAAGATAATGACTTCCG‑CCA‑CCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCa > 1:3184449/1‑150 (MQ=255) tttATTACTCAGCGCAAAGATAATGACTTCCG‑CCA‑CCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCa > 1:1288694/1‑150 (MQ=255) ttattaCTCAGCGCAAAGATAATGACTTCCG‑CCA‑CCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAg > 1:4136612/1‑150 (MQ=255) ttattaCTCAGCGCAAAGATAATGACTTCCG‑CCA‑CCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAg > 2:183314/1‑150 (MQ=255) ttattaCTCAGCGCAAAGATAATGACTTCCG‑CCA‑CCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAg > 1:1552045/1‑150 (MQ=255) ttattaCTCAGCGCAAAGATAATGACTTCCG‑CCA‑CCACGCCCAGCGAACACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCGATAAACAAACGCAg > 2:1270433/1‑150 (MQ=255) ttaCTCAGCGCAAAGATAATGACTTCCG‑CCA‑CCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGcc > 1:3227678/1‑150 (MQ=255) cTCAGCGCAACGATAATGAGTTCCG‑CCA‑CCACGCCCCGCGACCACAAATACCCCACCGCCGAGGCCGAGCAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGa > 2:3029931/1‑150 (MQ=255) cTCAGCGCAAAGATAATGACTTCCG‑CCA‑CCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGa > 2:3720915/1‑150 (MQ=255) cAGCGCAAAGATAATGACTTCCG‑CCA‑CCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGaaa > 2:2532563/1‑150 (MQ=255) cgaaaaGATAATGCCTCCCG‑CCA‑CCACGCCCAGCGACCACAAATCCCCCCCCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAgcg < 2:1460516/147‑1 (MQ=255) gcAAAGATAATGACTTCCG‑CCA‑CCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAgcgc > 1:2100496/1‑150 (MQ=255) aGATAATGACTTCCG‑CCA‑CCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGt > 2:750314/1‑150 (MQ=255) aGATAATGACTTCCG‑CCA‑CCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGt > 1:1775850/1‑150 (MQ=255) aGATAATGACTTCCG‑CCA‑CCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGt > 1:657271/1‑150 (MQ=255) aTAATGACTTCCG‑CCA‑CCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTc > 1:2482770/1‑150 (MQ=255) aTAATGACTTCCG‑CCA‑CCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTc > 1:1904692/1‑150 (MQ=255) aaTGGCCTCCGCCCA‑CCACGCCCGGCGACCACAAATCCCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCt < 1:763104/150‑1 (MQ=255) aTGACTCCCG‑CCA‑CCACGCCCAGCGACCACAAATCCCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTgg < 1:1319394/150‑1 (MQ=255) gACTTCCG‑CCA‑CCACGCCCAGCGACCACAAATACCCCACCGCCGAGACCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTCCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCg > 2:1148031/1‑150 (MQ=255) gcctCCG‑CCACCCCCGCCAAGGGCCAACAAATCCCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCg < 1:964803/147‑1 (MQ=255) tCCG‑CCA‑CCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAAcc > 1:2309177/1‑150 (MQ=255) tCCG‑CCA‑CCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAAcc > 2:1925657/1‑150 (MQ=255) g‑CCA‑CCACGCCAAGCGACCACAAATCCCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAACCAgc < 1:270948/150‑1 (MQ=255) ccccacGCCCAGCCCCCAAAAATCCCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAACCAgcgc < 2:924424/148‑1 (MQ=255) cacGCCAAGCGACCAAAAATCCCCCCCCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAACCAGCGCCaa < 1:263663/150‑1 (MQ=255) cccAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCAc > 1:212208/1‑150 (MQ=255) cccAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCAc > 2:2498604/1‑150 (MQ=255) cccAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCAc > 1:1178747/1‑150 (MQ=255) ccAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAAAGCAGGCCAGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCACg > 2:4169198/1‑150 (MQ=255) cAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCACGc > 2:1027476/1‑150 (MQ=255) aGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCACGCa > 2:3086372/1‑150 (MQ=255) gACCACAAATCCCCCCCCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCACGCAGAc < 1:2028367/150‑1 (MQ=255) gACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCACGCAGAc > 1:1640995/1‑150 (MQ=255) ccACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCTGGCCAGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCACGCAGACCa > 2:3227323/1‑150 (MQ=255) ccAAAAATCCCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCACGCAGACCa < 1:1082309/150‑1 (MQ=255) acaAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCACGCAGACCAAc > 1:1409950/1‑150 (MQ=255) | CAACGCCGTAGTTGCTCCCATAATGCCCCAGCGCACTACGCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTTCCG‑CCA‑CCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCACGCAGACCAACCGGT > AP012306/2212604‑2212900 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |