| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AP012306 | 713,244 | 0 | C | T | 69.7% | 586.9 / inf | 379 | S21F (TCC→TTC) | ompX | outer membrane protein |
| Reads supporting (aligned to +/- strand): ref base C (58/57); new base T (145/119); total (203/176) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.35e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.15e-01 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 383 total aligned reads displayed.
TTAGACATCACAAATCGCGAAGAGTTTCCCATTAATTTTTGATATATTTAAAACTTAGGACTTATTTGAATCACATTTGAGGTGGTTATGAAAAAAATTGCATGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTCCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAGCGACGCTC‑AGGGCCAAATGAACAAAATGGGCGGTTTCAACCTGAAATACCGCTATGAAGAAGACAACAGCCCGCTGGGTGTGATCGGTTCTTTCACTTACACCG > AP012306/713096‑713390 | ttAGACATCACAAATCGCGAAGAGTTTCCCATTAATTTTTGATATATTTAAAACTTAGGACTTATTTGAATCACATTTGAGGTGGTTATGAAAAAAATTGCATGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTcc < 1:349948/150‑1 (MQ=255) gACATCACAAATCGCGAAGAGTTTCCCATTAATTTTTGATATATTTAAAACTTAGGACTTATTTGAATCACATTTGAGGTGGTTATGAAAAAAATTGCATGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTTCGTa > 2:2695443/1‑150 (MQ=255) aCATCACAAATCGCGAAGAGTTTCCCATTAATTTTTGATATATTTAAAACTTAGGACTTATTTGAATCACATTTGAGGTGGTTATGAAAAAAATTGCATGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTCCGTAg > 2:1400383/1‑150 (MQ=255) cATCACAAATCGCGAAGAGTTTCCCATTAATTTTTGATATATTTAAAACTTAGGACTTATTTGAATCACATTTGAGGTGGTTATGAAAAAAATTGCATGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTTCGTAGc > 2:1439627/1‑150 (MQ=255) aTCACAAATCGCGAAGAGTTTCCCATTAATTTTTGATATATTTAAAACTTAGGACTTATTTGAATCACATTTGAGGTGGTTATGAAAAAAATTGCATGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTCCGTAGCt < 2:3997451/150‑1 (MQ=255) cacaAATCGCGAAGAGTTTCCCATTAATTTTTGATATATTTAAAACTTAGGACTTATTTGAATCACATTTGAGGTGGTTATGAAAAAAATTGCATGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTTCGTAGCTGc > 1:3449326/1‑150 (MQ=255) aaaTCGCGAAGAGTTTCCCATTAATTTTTGATATATTTAAAACTTAGGACTTATTTGAATCACATTTGAGGTGGTTATGAAAAAAATTGCATGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTCCGTAGCTGCGAc > 2:1833305/1‑150 (MQ=255) aaTCGCGAAGAGTTTCCCATTAATTTTTGATATATTTAAAACTTAGGACTTATTTGAATCACATTTGAGGTGGTTATGAAAAAAATTGCATGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTTCGTAGCTGCGACt < 2:1326766/150‑1 (MQ=255) tCGCGAAGAGTTTCCCATTAATTTTTGATATATTTAAAACTTAGGACTTATTTGAATCACATTTGAGGTGGTTATGAAAAAAATTGCATGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTTCGTAGCTGCGACTTc > 2:3645077/1‑150 (MQ=255) cgcgAAGAGTTTCCCATTAATTTTTGATATATTTAAAACTTAGGACTTATTTGAATCACATTTGAGGTGGTTATGAAAAAAATTGCATGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTCCGTAGCTGCGACTTCt > 2:3912542/1‑150 (MQ=255) cgAAGAGTTTCCCATTAATTTTTGATATATTTAAAACTTAGGACTTATTTGAATCACATTTGAGGTGGTTATGAAAAAAATTGCATGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTCCGTAGCTGCGACTTCTAc > 2:789995/1‑150 (MQ=255) agagTTTCCCATTAATTTTTGATATATTTAAAACTTAGGACTTATTTGAATCACATTTGAGGTGGTTATGAAAAAAATTGCATGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTTCGTAGCTGCGACTTCTACTGt > 2:3048685/1‑150 (MQ=255) gagTTTCCCATTAATTTTTGATATATTTAAAACTTAGGACTTATTTGAATCACATTTGAGGTGGTTATGAAAAAAATTGCATGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTTCGTAGCTGCGACTTCTACTGTa > 1:1140043/1‑150 (MQ=255) gagTTTCCCATTAATTTTTGATATATTTAAAACTTAGGACTTATTTGAATCACATTTGAGGTGGTTATGAAAAAAATTGCATGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTTCGTAGCTGCGACTTCTACTGTa > 2:418807/1‑150 (MQ=255) agTTTCCCATTAATTTTTGATATATTTAAAACTTAGGACTTATTTGAATCACATTTGAGGTGGTTATGAAAAAAATTGCATGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTCCGTAGCTGCGACTTCTACTGTaa > 2:134400/1‑150 (MQ=255) ttCCCATTAATTTTTGATATATTTAAAACTTAGGACTTATTTGAATCACATTTGAGGTGGTTATGAAAAAAATTGCATGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTTCGTAGCTGCGACTTCTACTGTAACTg > 2:1422781/1‑150 (MQ=255) cccATTAATTTTTGATATATTTAAAACTTAGGACTTATTTGAATCACATTTGAGGTGGTTATGAAAAAAATTGCATGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTTCGTAGCTGCGACTTCTACTGTAACTGGc < 1:1657788/150‑1 (MQ=255) ccATTAATTTTTGATATATTTAAAACTTAGGACTTATTTGAATCACATTTGAGGTGGTTATGAAAAAAATTGCATGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTTCGTAGCTGCGACTTCTACTGTAACTGGCg > 1:2709156/1‑150 (MQ=255) aTTAATTTTTGATATATTTAAAACTTAGGACTTATTTGAATCACATTTGAGGTGGTTATGAAAAAAATTGCATGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTTCGTAGCTGCGACTTCTACTGTAACTGGCGGt < 1:1496211/150‑1 (MQ=255) aTTTTTGATATATTTAAAACTTAGGACTTATTTGAATCACATTTGAGGTGGTTATGAACAAAATTGCATGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTTCGTAGCTGCGACTTCTACTGTAACTGACGGTTACg > 1:2243432/1‑150 (MQ=255) tttGATATATTTAAAACTTAGGACTTATTTGAATCACATTTGAGGTGGTTATGAAAAAAATTGCATGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTCCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGcac > 2:153392/1‑150 (MQ=255) tttGATATATTTAAAACTTAGGACTTATTTGAATCACATTTGAGGTGGTTATGAAAAAAATTGCACGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTCCGTAGCTGCGACTTCTACTGTAACTGGCGGGTACGcac > 1:2096341/1‑150 (MQ=255) gATATATTTAAAACTTAGGACTTATTTGAATCACATTTGAGGTGGTTATGAAAAAAATTGCATGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTTCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGcacata > 1:1974563/1‑148 (MQ=255) atatatTTAAAACTTAGGACTTATTTGAATCACATTTGAGGTGGTTATGAAAAAAATTGCATGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTCCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACagag > 2:37188/1‑150 (MQ=255) atatatTTAAAACTTAGGACTTATTTGAATCACATTTGAGGTGGTTATGAAAAAAATTGCATGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTCCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACagag < 1:4032314/150‑1 (MQ=255) tatatTTAAAACTTAGGACTTATTTGAATCACATTAGAGGTGGTTATGAAAAAAATTGCATGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTTCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCCCAGAGc > 2:3577163/1‑150 (MQ=255) atatTTAAAACTTAGGACTTATTTGAATCACATTTGAGGTGGTTATGAAAAAAATTGCATGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTTCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAGCg > 2:3788575/1‑150 (MQ=255) tatTTAAAACTTAGGACTTATTTGAATCACATTTGAGGTGGTTATGAAAAAAATTGCATGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTCCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAGCGa < 2:55517/150‑1 (MQ=255) atTTAAAACTTAGGACTTATTTGAATCACATTTGAGGTGGTTATGAAAAAAATTGCATGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTTCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAGCGAc < 2:635149/150‑1 (MQ=255) atTTAAAACTTAGGACTTATTTGAATCACATTTGAGGTGGTTATGAAAAAAATTGCATGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTTCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAGCGAc < 2:2593026/150‑1 (MQ=255) atTTAAAACTTAGGACTTATTTGAATCACATTTGAGGTGGTTATGAAAAAAATTGCATGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTTCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAGCGAc < 2:1919763/150‑1 (MQ=255) tAAAACTTAGGACTTATTTGAATCACATTTGAGGTGGTTATGAAAAAAATTGCATGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTTCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAGCGACGCt > 2:2174749/1‑150 (MQ=255) tAAAACTTAGGACTTATTTGAATCACATTTGAGGTGGTTATGAAAAAAATTGCATGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTTCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAGCGACGCt < 1:418361/150‑1 (MQ=255) aaaaCTTAGGACTTATTTGAATCACATTTGAGGTGGTTATGAAAAAAATTGCATGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTCCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAGCGACGCTc < 2:1231073/150‑1 (MQ=255) aCTTAGGACTTATTTGAATCACATTTGAGGTGGTTATGAAAAAAATTGCATGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTCCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAGCGACGCTC‑Agg < 2:4061306/150‑1 (MQ=255) cTTAGGACTTATTTGAATCACATTTGAGGTGGTTATGAAAAAAATTGCATGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTTCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAGCGACGCTC‑Aggg < 2:3233922/150‑1 (MQ=255) cTTAGGACTTATTTGAATCACATTTGAGGTGGTTATGAAAAAAATTGCATGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTCCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAGCGACGCTC‑Aggg < 2:246144/150‑1 (MQ=255) ttAGGACTTATTTGAATCACATTTGAGGTGGTTATGAAAAAAATTGCATGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTTCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAGCGACGCTC‑AGGGc < 1:3712623/150‑1 (MQ=255) ttAGGACTTATTTGAATCACATTTGAGGTGGTTATGAAAAAAATTGCATGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTTCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAGCGACGCTC‑AGGGc < 1:685078/150‑1 (MQ=255) tAGGACTTATTTGAATCACATTTGAGGTGGTTATGAAAAAAATTGCATGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTTCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAGCGACGCTC‑AGGGcc > 1:1262627/1‑150 (MQ=255) aCTTATTTGAATCACATTTGAGGTGGTTATGAAAAAAATTGCATGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTTCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAGCGACGCTC‑AGGGCCAAAt < 2:696088/150‑1 (MQ=255) cTTATTTGAATCACATTTGAGGTGGTTATGAAAAAAATTGCATGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTTCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAACGACGCTC‑AGGGCCAAATg > 2:590253/1‑150 (MQ=255) tATTTGAATCACATTTGAGGTGGTTATGAAAAAAATTGCATGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTTCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAGGGGCGCTC‑AGGGCCCAATGaa > 2:2509480/1‑150 (MQ=255) tATTTGAATCACATTTGAGGTGGTTATGAAAAAAATTGCATGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTTCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAGCGACGCTC‑AGGGCCAAATGaa > 1:2165709/1‑150 (MQ=255) tATTTGAATCACATTTGAGGTGGTTATGAAAAAAATTGCATGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTTCGTAGCTGCGACTTCTACTGTAACTGGCGGTTAAGCACCAAGCGGCGCCCTAGGGcccaccaa > 2:2968836/1‑144 (MQ=255) tttGAATCACATTTGAGGTGGTTATGAAAAAAATTGCATGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTCCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAGCGACGCTC‑AGGGCCAAATGAACa > 1:466748/1‑150 (MQ=255) aTCACATTTGAGGTGGTTATGAAAAAAATTGCATGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTTCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAGCGACGCTC‑AGGGCCAAATGAACAAAATg < 2:3309095/150‑1 (MQ=255) cacaTTTGAGGTGGTTATGAAAAAAATTGCATGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTCCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAGCGACGCTC‑AGGGCCAAATGAACAAAATggg > 1:3812203/1‑150 (MQ=255) caTTTGAGGTGGTTATGAAAAAAATTGCATGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTTCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAGCGACGCTC‑AGGGCCAAATGAACAAAATGGGCg > 1:1796539/1‑150 (MQ=255) caTTTGAGGTGGTTATGAAAAAAATTGCATGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTCCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAGCGACGCTC‑AGGGCCAAATGAACAAAATGGGCg > 1:3010039/1‑150 (MQ=255) aTTTGAGGTGGTTATGAAAAAAATTGCATGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTTCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAGCGACGCTC‑AGGGCCAAATGAACAAAATGGGCgg < 1:534734/150‑1 (MQ=255) aTTTGAGGTGGTTATGAAAAAAATTGCATGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTTCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAGCGACGCTC‑AGGGCCAAATGAACAAAATGGGCgg > 2:1708458/1‑150 (MQ=255) aTTTGAGGTGGTTATGAAAAAAATTGCATGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTTCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAGCGACGCTC‑AAGGCCAAATGAACAAAATGGGCgg > 1:4117681/1‑150 (MQ=255) tttGAGGTGGTTATGAAAAAAATTGCATGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTCCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAGCGACGCTC‑AGGGCCAAATGAACAAAATGGGCggg > 2:3850581/1‑149 (MQ=255) tttGAGGTGGTTATGAAAAAAATTGCATGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTCCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAGCGACGCTC‑AGGGCCAAATGAACAAAATGGGCGGt < 1:3634868/150‑1 (MQ=255) ttGAGGTGGTTATGAAAAAAATTGCATGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTTCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAGCGACGCTC‑AGGGCCAAATGAACAAAATGGGCGGtt < 2:3132059/150‑1 (MQ=255) tGAGGTGGTTATGAAAAAAATTGCATGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTTCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAGCGACGCTC‑AGGGCCAAATGAACAAAATGGGCGGgtt > 1:2530106/1‑150 (MQ=255) ggtggtTATGAAAAAAATTGCATGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTTCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAGCGACGCTC‑AGGGCCAAATGAACAAAATGGGCGGGTTCaa > 1:431244/1‑150 (MQ=255) gtggtTATGAAAAAAATTGCATGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTTCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAGCGACGCTC‑AGGGCCAAATGAACAAAATGGGCGGTTTCAAc > 2:2283215/1‑150 (MQ=255) gtTATGAAAAAAATTGCATGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTCCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAGCGACGCTC‑AGGGCCAAATGAACAAAATGGGCGGTTTCAACCTg < 1:2599745/150‑1 (MQ=255) aTGAAAAAAATTGCATGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTTCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAGCGACGCTC‑AGGGCCAAATGAACAAAAAGGGCGGGTTCAACCTGaaa > 2:2858832/1‑150 (MQ=255) aaaaaaaTTGCATGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTTCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAGCGACGCTC‑AGGGCCAAATGAACAAAATGGGCGGTTTCAACCTGAAATAc < 2:2659986/150‑1 (MQ=255) aaaaaaTTGCATGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTTCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAGCGACGCTC‑AGGGCCAAATGAACAAAATGGGCGGTTTCAACCTGAAATAcc < 2:1000058/150‑1 (MQ=255) aaaaaaTTGCATGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTTCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAGCGACGCTC‑AGGGCCAAATGAACAAAATGGGCGGTTTCAACCTGAAATAcc < 2:1122885/150‑1 (MQ=255) aaaaTTGCATGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTCCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAGCGACGCTC‑AGGGCCAAATGAACAAAATGGGCGGTTTCAACCTGAAATACCGc < 1:1092140/150‑1 (MQ=255) aaaTTGCATGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTTCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAGCGACGCTC‑AGGGCCAAATGAACAAAATGGGCGGTTTCAACCTGAAATACCGCt < 1:817698/150‑1 (MQ=255) aaTTGCATGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTTCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAGCGACGCCC‑AGGGCCAAATGAACAAAATGGGCGGCTTCAACCTGAAATACCGcca > 1:4281102/1‑148 (MQ=255) aaTTGCATGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTCCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAGCGACGCTC‑AGGGCCAAATGAACAAAATGGGCGGTTTCAACCTGAAATACCGCTa > 2:238329/1‑150 (MQ=255) aTTGCATGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTTCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAGCGACGCTC‑AGGGCCAAATGAACAAAATGGGCGGTTTCAACCTGAAATACCGCTAt < 1:2339957/150‑1 (MQ=255) aTTGCATGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTTCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAGCGACGCTC‑AGGGCCAAATGAACAAAATGGGCGGGTTCAACCTGAAATACCGCCAt > 2:1739910/1‑150 (MQ=255) gCATGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTTCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAGCGACGCTC‑AGGGCCAAATGAACAAAATGGGCGGGTTCAACCTGAAATACCGCTATgaa > 1:2861740/1‑150 (MQ=255) aTGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTTCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAGCGACGCTC‑AGGGCCAAATGAACAAAATGGGCGGTTTCAACCTGAAATACCGCTATgaaga < 1:3933485/150‑1 (MQ=255) aTGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTCCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAGCGACGCTC‑AGGGCCAAATGAACAAAATGGGCGGTTTCAACCTGAAATACCGCTATgaaga < 1:361252/150‑1 (MQ=255) tGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTTCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAGCGACGCTC‑AGGGCCAAATGAACAAAATGGGCGGTTTCAACCTGAAATACCGCTATgaagaa < 1:2643480/150‑1 (MQ=255) tGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTTCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAGCGACGCTC‑AGGGCCAAATGAACAAAATGGGCGGGTTCAACCTGAAATACCGCTATgaagaa > 2:3026514/1‑150 (MQ=255) tGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTCCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAGCGACGCTC‑AGGGCCAAATGAACAAAATGGGCGGTTTCAACCTGAAATACCGCTATgaagaa < 1:240136/150‑1 (MQ=255) gTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTTCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAGCGACGCTC‑AGGGCCAAATGAACAAAATGGGCGGTTTCAACCTGAAATACCGCTATGaagaag < 1:722826/150‑1 (MQ=255) tttCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTTCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAGCGACGCTC‑AGGGCCAAATGAACAAAATGGGCGGTTTCAACCTGAAATACCGCTATGAAGAAGaca < 2:931559/150‑1 (MQ=255) tCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTTCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAGCGACGCTC‑AGGGCCAAATGAACAAAATGGGCGGTTTCAACCTGAAATACCGCTATGAAGAAGacaac < 2:1817055/150‑1 (MQ=255) cAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTTCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAGCGACGCTC‑AGGGCCAAATGAACAAAATGGGCGGTTTCAACCTGAAATACCGCTATGAAGAAGacaaca > 1:860764/1‑150 (MQ=255) cACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTTCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAGCGACGCTC‑AGGGCCAAATGAACAAAATGGGCGGGTTCAACCTGAAATACCGCTATGAAGAAGACAACAGcc > 1:3376558/1‑150 (MQ=255) aCTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTTCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAGCGACGCTC‑AGGGCCAAATGAACAAAATGGGCGGTTTCAACCTGAAATACCGCTATGAAGAAGACAACAGccc > 1:3798916/1‑150 (MQ=255) tGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTTCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAGCGACGCCC‑AGGGCCAAATGAACAAAATTGGCGGGTTCCACCTGGAATACCGCTATGAAGAAGACAAAAGccccc > 2:4346653/1‑148 (MQ=255) ccGCAGTTCTGGCTTTCACCGCAGGTACTTCCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAGCGACGCTC‑AGGGCCAAATGAACAAAATGGGCGGTTTCAACCTGAAATACCGCTATGAAGAAGACAACAGCCCGCTgg > 1:1404228/1‑150 (MQ=255) cGCAGTTCTGGCTTTCACCGCAGGTACTTTCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAGCGACGCTC‑AGGGCCAAATGAACAAAATGGGCGGTTTCAACCTGAAATACCGCTATGAAGAAGACAACAGCCCGCTggg < 2:4237767/150‑1 (MQ=255) cGCAGTTCTGGCTTTCACCGCAGGTACTTTCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAGCGACGCTC‑AGGGCCAAATGAACAAAATGGGCGGTTTCAACCTGAAATACCGCTATGAAGAAGACAACAGCCCGCTggg < 1:1331552/150‑1 (MQ=255) cAGTTCTGGCTTTCACCGCAGGTACTTTCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAGCGACGCTC‑AGGGCCAAATGAACAAAATGGGCGGTTTCAACCTGAAATACCGCTATGAAGAAGACAACAGCCCGCTGGgtg < 2:2036697/150‑1 (MQ=255) ttCTGGCTTTCACCGCAGGTACTTTCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAGCGACGCTC‑AGGGCCAAATGAACAAAATGGGCGGTTTCAACCTGAAATACCGCTATGAAGAAGACAACAGCCCGCTGGGTGTGa < 2:1550395/150‑1 (MQ=255) cTGGCTTTCACCGCAGGTACTTCCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAGCGACGCTC‑AGGGCCAAATGAACAAAATGGGCGGTTTCAACCTGAAATACCGCTATGAAGAAGACAACAGCCCGCTGGGTGTGATc > 1:130015/1‑150 (MQ=255) ggCTTTCACCGCAGGTACTTTCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAGCGACGCTC‑AGGGCCAAATGAACAAAATGGGCGGGTTCAACCTGAAATACCGCTATGAAGAAGACAAAAGCCCGCTGGGTGTGATCgg > 2:2308359/1‑150 (MQ=255) tttCACCGCAGGTACTTTCGTAGCTGCGACTTCTACTTTAACTGGCGGTTACGCACAGAGCGACGCTC‑AGGGCCAAATGAACAAAATGGGCGGGTTCAACCTGAAATACCGCTATGAAGAAGACAACAGCCCGCTGGGTGTGATCGGGTc > 1:1211474/1‑150 (MQ=255) tttCACCGCAGGTACTTTCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAGCGACGCTC‑AGGGCCAAATGAACAAAATGGGCGGTTTCAACCTGAAATACCGCTATGAAGAAGACAACAGCCCGCTGGGTGTGATCGGTTc < 1:1899733/150‑1 (MQ=255) tttCACCGCAGGTACTTTCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAGCGACGCTC‑AGGGCCAAATGAACAAAATGGGCGGTTTCAACCTGAAATACCGCTATGAAGAAGACAACAGCCCGCTGGGTGTGATCGGTTc < 1:3113574/150‑1 (MQ=255) cACCGCAGGTACTTTCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAGCGACGCTC‑AGGGCCAAATGAACAAAATGGGCGGTTTCAACCTGAAATACCGCTATGAAGAAGACAACAGCCCGCTGGGTGTGATCGGTTCttt < 2:1182807/150‑1 (MQ=255) cACCGCAGGTACTTTCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAGCGACGCTC‑AGGGCCAAATGAACAAAATGGGCGGTTTCAACCTGAAATACCGCTATGAAGAAGACAACAGCCCGCTGGGTGTGATCGGTTCttt < 2:2003613/150‑1 (MQ=255) cACCGCAGGTACTTCCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAGCGACGCTC‑AGGGCCAAATGAACAAAATGGGCGGTTTCAACCTGAAATACCGCTATGAAGAAGACAACAGCCCGCTGGGTGTGATCGGTTCttt < 2:338158/150‑1 (MQ=255) cAGGTACTTTCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCCCAGAGCGACGCTC‑AGGGCCAAATGAACAAAATGGGCGGGTTCTACCTGAAATACCGCTATGAAGAAGACAACAGCCCGCTGGGGGGGATCGGTTCTTTTACtt > 2:2671840/1‑150 (MQ=255) gTACTTTCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAGCGACGCTC‑AGGGCCAAATGAACAAAATGGGCGGTTTCAACCTGAAATACCGCTATGAAGAAGACAACAGCCCGCTGGGTGTGATCGGTTCTTTCACTTaca < 1:3202873/150‑1 (MQ=255) tACTTTCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAGCGACGCTC‑AGGGCCAAATGAACAAAATGGGCGGTTTCAACCTGAAATACCGCTATGAAGAAGACAACAGCCCGCTGGGTGTGATCGGTTCTTTCACTTacac < 2:452586/150‑1 (MQ=255) cTTTCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAGCGACGCTC‑AGGGCCAAATGAACAAAATGGGCGGTTTCAACCTGAAATACCGCTATGAAGAAGACAACAGCCCGCTGGGTGTGATCGGTTCTTTCACTTACACCg < 2:2773945/150‑1 (MQ=255) | TTAGACATCACAAATCGCGAAGAGTTTCCCATTAATTTTTGATATATTTAAAACTTAGGACTTATTTGAATCACATTTGAGGTGGTTATGAAAAAAATTGCATGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTCCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAGCGACGCTC‑AGGGCCAAATGAACAAAATGGGCGGTTTCAACCTGAAATACCGCTATGAAGAAGACAACAGCCCGCTGGGTGTGATCGGTTCTTTCACTTACACCG > AP012306/713096‑713390 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |