| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP012306 | 3647856 = | 279 (0.910) | 6 (0.020) | 6/286 | 10.2 | 2.1% | coding (48/1737 nt) | aceK | isocitrate dehydrogenase kinase/phosphatase |
| ? | AP012306 | 3647888 = | 281 (0.960) | coding (80/1737 nt) | aceK | isocitrate dehydrogenase kinase/phosphatase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TGCAGCGCAGTTGCTCCACGACCAGACCAACGTGATGATCGTAAAGATGGATACGGTTTTTCATCGCCTGCTGGACAGCATGCCAGTCGGCCTGTTCGAAACGCTGCTGCGCACCGGAGGTCACTTCGAGGAATCGACCATACTGAGCATCGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP012306/3648010‑3647856‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgaagTGACCTCCGGTGCGCAGCAGCGTTTCGAACAGGCCGACTGGCATGCTGTCCAGCAGGCGATGAAAAACCGTATCCATCTTTACGATCATCACGTTGGTCTGGTCGTGGAGCAACTGCGCTGCATTACTAACGGCCAAAGTACGGACGCG > AP012306/3647888‑3648036 TGCAGCGCAGTTGCTCCACGACCAGACCAACGTGATGATCGTAAAGATGGATACGGTTTTTCATCGCCTGCTGGACAGCATGCCAGTCGGCCTGTTCGAAACGCTGCTGCGCACCGGAGGTCACTTCGAGGAATCGACCATACTGAGCAT > 1:1829344/1‑150 GCAGCGCAGTTGCTCCACGACCAGACCAACGTGATGATCGTAAAGATGGATACGGTTTTTCATCGCCTGCTGGACAGCATGCCAGTCGGCCTGTTCGAAACGCTGCTGCGCACCGGAGGTCACTTCGAGGAATCGACCATACTGAGCATC < 2:2219840/150‑1 GCAGCGCAGTTGCTCCACGACCAGACCAACGTGATGATCGTAAAGATGGATACGGTTTTTCATCGCCTGCTGGACAGCATGCCAGTCGGCCTGTTCGAAACGCTGCTGCGCACCGGAGGTCACTTCGAGGAATCGACCATACTGAGCATC < 2:3351433/150‑1 GCAGCGCAGTTGCTCCACGACCAGACCAACGTGATGATCGTAAAGATGGATACGGTTTTTCATCGCCTGCTGGACAGCATGCCAGTCGGCCTGTTCGAAACGCTGCTGCGCACCGGAGGTCACTTCGAGGAATCGACCATACTGAGCATC < 1:3976210/150‑1 CAGCGCAGTTGCTCCACGACCAGACCAACGTGATGATCGTAAAGATGGATACGGTTTTTCATCGCCTGCTGGACAGCATGCCAGTCGGCCTGTTCGAAACGCTGCTGCGCACCGGAGGTCACTTCGAGGAATCGACCATACTGAGCATCG > 1:2354197/1‑150 CAGCGCAGTTGCTCCACGACCAGACCAACGTGATGATCGTAAAGATGGATACGGTTTTTCATCGCCTGCTGGACAGCATGCCAGTCGGCCTGTTCGAAACGCTGCTGCGCACCGGAGGTCACTTCGAGGAATCGACCATACTGAGCATCG < 1:2810377/150‑1 CAGCGCAGTTGCTCCACGACCAGACCAACGTGATGATCGTAAAGATGGATACGGTTTTTCATCGCCTGCTGGACAGCATGCCAGTCGGCCTGTTCGAAACGCTGCTGCGCACCGGAGGTCACTTCGAGGAATCGACCATACTGAGCATCG > 2:2755609/1‑150 AGCGCAGTTGCTCCACGACCAGACCAACGTGATGATCGTAAAGATGGATACGGTTTTTCATCGCCTGCTGGACAGCATGCCAGTCGGCCTGTTCGAAACGCTGCTGCGCACCGGAGGTCACTTCGAGGAATCGACCATACTGAGCATCGA < 2:2425417/150‑1 AGCGCAGTTGCTCCACGACCAGACCAACGTGATGATCGTAAAGATGGATACGGTTTTTCATCGCCTGCTGGACAGCATGCCAGTCGGCCTGTTCGAAACGCTGCTGCGCACCGGAGGTAACTTCGAGGAATCGACCATACTGAGCATCGA > 2:810054/1‑150 GCGCAGTTGCTCCACGACCAGACCAACGTGATGATCGTAAAGATGGATACGGTTTTTCATCGCCTGCTGGACAGCATGCCAGTCGGCCTGTTCGAAACGCTGCTGCGCACCGGAGGTCACTTCGAGGAATCGACCATACTGAGCATCGAA > 1:3828261/1‑150 CGCAGTTGCTCCACGACCAGACCAACGTGATGATCGTAAAGATGGATACGGTTTTTCATCGCCTGCTGGACAGCATGCCAGTCGGCCTGTTCGAAACGCTGCTGCGCACCGGAGGTCACTTCGAGGAATCGACCATACTGAGCATCGAAG > 2:1836767/1‑150 CGCAGTTGCTCCACGACCAGACCAACGTGATGATCGTAAAGATGGATACGGTTTTTCATCGCCTGCTGGACAGCATGCCAGTCGGCCTGTTCGAAACGCTGCTGCGCACCGGAGGTCACTTCGAGGAATCGACCATACTGAGCATCGAAG < 1:664061/150‑1 CGCAGTTGCTCCACGACCAGACCAACGTGATGATCGTAAAGATGGATACGGTTTTTCATCGCCTGCTGGACAGCATGCCAGTCGGCCTGTTCGAAACGCTGCTGCGCACCGGAGGTCACTTCGAGGAATCGACCATACTGAGCATCGAAG < 1:3577665/150‑1 AGTTGCTCCACGACCAGACCAACGTGATGATCGTAAAGATGGATACGGTTTTTCATCGCCTGCTGGACAGCATGCCAGTCGGCCTGTTCGAAACGCTGCTGCGCACCGGAGGTCACTTCGAGGAATCGACCATACTGAGCATCGAAGTGA > 1:3150335/1‑150 ATGATCGTAAAGATGGATACGGTTTTTCATCGCCTGCTGGACAGCATGCCAGTCGGCCTGTTCGAAACGCTGCTGCGCACCGGAGGTCACTTCGAGGAATCGACCATACTGAGCATCGAAGTGACCTCCGGTGCGCAGCAGCGTTTCGAA > 1:2942522/1‑150 AAGATGGATACGGTTTTTCATCGCCTGCTGGACAGCATGCCAGTCGGCCTGTTCGAAACGCTGCTGCGCACCGGAGGTCACTTCGAGGAATCGACCATACTGAGCATCGAAGTGACCTCCGGTGCGCAGCAGCGTTTCGAACA < 2:1093493/143‑1 AAGATGGATACGGTTTTTCATCGCCTGCTGGACAGCATGCCAGTCGGCCTGTTCGAAACGCTGCTGCGCACCGGAGGTCACTTCGAGGAATCGACCATACTGAGCATCGAAGTGACCTCCGGTGCGCAGCAGCGTTTCGAACA > 1:1093493/1‑143 ATGGATACGGTTTTTCATCGCCTGCTGGACAGCATGCCAGTCGGCCTGTTCGAAACGCTGCTGCGCACCGGAGGTCACTTCGAGGAATCGACCATACTGAGCATCGAAGTGACCTCCGGTGCGCAGCAGCGTTTCGAACAGGCCGACTGG < 2:2942522/150‑1 GCATGCCAGTCGGCCTGTTCGAAACGCTGCTGCGCACCGGAGGTCACTTCGAGGAATCGACCATACTGAGCATCGAAGTGACCTCCGGTGCGCAGCAGCGTTTCGAACAGGCCGACTGGCATGCTGTCCAGCAGGCGATGAAAAACCGTA < 2:3150335/150‑1 TCGAAGTGACCTCCGGTGCGCAGCAGCGTTTCGAACAGGCCGACTGGCATGCTGTCCAGCAGGCGATGAAAAACCGTATCCATCTTTACGATCATCACGTTGGTCTGGTCGTGGAGCAACTGCGCTGCATTACTAACGGCCAAAGTACGG < 1:1883682/150‑1 CGAAGTGACCTCCGGTGCGCAGCAGCGTTTCGAACAGGCCGACTGGCATGCTGTCCAGCAGGCGATGAAAAACCGTATCCATCTTTACGATCATCACGTTGGTCTGGTCGTGGAGCAACTGCGCTGCATTACTAACGGCCAAAGTACGGA < 1:1114148/150‑1 CGAAGTGACCTCCGGTGCGCAGCAGCGTTTCGAACAGGCCGACTGGCATGCTGTCCAGCAGGCGATGAAAAACCGTATCCATCTTTACGATCATCACGTTGGTCTGGTCGTGGAGCAACTGCGCTGCATTACTAACGGCCAAAGTACGGA > 1:3680271/1‑150 GAAGTGACCTCCGGTGCGCAGCAGCGTTTCGAACAGGCCGACTGGCATGCTGTCCAGCAGGCGATGAAAAACCGTATCCATCTTTACGATCATCACGTTGGTCTGGTCGTGGAGCAACTGCGCTGCATTACTAACGGCCAAAGTACGGAC < 2:2713503/150‑1 GAAGTGACCTCCGGTGCGCAGCAGCGTTTCGAACAGGCCGACTGGCATGCTGTCCAGCAGGCGATGAAAAACCGTATCCATCTTTACGATCATCACGTTGGTCTGGTCGTGGAGCAACTGCGCTGCATTACTAACGGCCAAAGTACGGAC > 1:3060291/1‑150 GAAGTGACCTCCGGTGCGCAGCAGCGTTTCGAACAGGCCGACTGGCATGCTGTCCAGCAGGCGATGAAAAACCGTATCCATCTTTACGATCATCACGTTGGTCTGGTCGTGGAGCAACTGCGCTGCATTACTAACGGCCAAAGTACGGAC > 2:3592570/1‑150 AAGTGACCTCCGGTGCGCAGCAGCGTTTCGAACAGGCCGACTGGCATGCTGTCCAGCAGGCGATGAAAAACCGTATCCATCTTTACGATCATCACGTTGGTCTGGTCGTGGAGCAACTGCGCTGCATTACTAACGGCCAAAGTACGGACG > 2:1692558/1‑150 AAGTGACCTCCGGTGCGCAGCAGCGTTTCGAACAGGCCGACTGGCATGCTGTCCAGCAGGCGATGAAAAACCGTATCCATCTTTACGATCATCACGTTGGTCTGGTCGTGGAGCAACTGCGCTGCATTACTAACGGCCAAAGTACGGACG < 2:2983121/150‑1 AAGTGACCTCCGGTGCGCAGCAGCGTTTCGAACAGGCCGACTGGCATGCTGTCCAGCAGGCGATGAAAAACCGTATCCATCTTTACGATCATCACGTTGGTCTGGTCGTGGAGCAACTGCGCTGCATTACTAACGGCCAAAGTACGGACG > 1:1447177/1‑150 AAGTGACCTCCGGTGCGCAGCAGCGTTTCGAACAGGCCGACTGGCATGCTGTCCAGCAGGCGATGAAAAACCGTATCCATCTTTACGATCATCACGTTGGTCTGGTCGTGGAGCAACTGCGCTGCATTACTAACGGCCAAAGTACGGACG < 2:965467/150‑1 AGTGACCTCCGGTGCGCAGCAGCGTTTCGAACAGGCCGACTGGCATGCTGTCCAGCAGGCGATGAAAAACCGTATCCATCTTTACGATCATCACGTTGGTCTGGTCGTGGAGCAACTGCGCTGCATTACTAACGGCCAAAGTACGGACGC > 2:3844510/1‑150 GTGACCTCCGGTGCGCAGCAGCGTTTCGAACAGGCCGACTGGCATGCTGTCCAGCAGGCGATGAAAAACCGTATCCATCTTTACGATCATCACGTTGGTCTGGTCGTGGAGCAACTGCGCTGCATTACTAACGGCCAAAGTACGGACGCG < 2:1888059/150‑1 GTGACCTCCGGTGCGCAGCAGCGTTTCGAACAGGCCGACTGGCATGCTGTCCAGCAGGCGATGAAAAACCGTATCCATCTTTACGATCATCACGTTGGTCTGGTCGTGGAGCAACTGCGCTGCATTACTAACGGCCAAAGTACGGACGCG > 1:2514061/1‑150 TGCAGCGCAGTTGCTCCACGACCAGACCAACGTGATGATCGTAAAGATGGATACGGTTTTTCATCGCCTGCTGGACAGCATGCCAGTCGGCCTGTTCGAAACGCTGCTGCGCACCGGAGGTCACTTCGAGGAATCGACCATACTGAGCATCGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP012306/3648010‑3647856‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgaagTGACCTCCGGTGCGCAGCAGCGTTTCGAACAGGCCGACTGGCATGCTGTCCAGCAGGCGATGAAAAACCGTATCCATCTTTACGATCATCACGTTGGTCTGGTCGTGGAGCAACTGCGCTGCATTACTAACGGCCAAAGTACGGACGCG > AP012306/3647888‑3648036 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |