New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AP012306 | = 3608580 | 392 (1.220) | 8 (0.030) | 8/284 | 17.4 | 2.1% | coding (489/705 nt) | rplA | 50S ribosomal subunit protein L1 |
? | AP012306 | = 3608581 | 365 (1.190) | coding (490/705 nt) | rplA | 50S ribosomal subunit protein L1 | |||||
Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Rejected: Frequency below/above cutoff threshold. |
GACGTTGTTATTGCTTCTCCGGATGCAATGCGCGTTGTTGGCCAGCTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAAGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP012306/3608425‑3608580 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgttacGGTAACGAACCTGGCCAGCTTTAGCGTTTTTAACCGCTTCAGCAACGTTCGGTGTTACAGTACCCACTTTCGGGTTTGGCATCAGGCCGCGCGGACCCAGAACCTGGCCCAGCTGGCCAACAACGCGCATTGCATCCGGAGAAGCAATA < AP012306/3608581‑3608433 GACGTTGTTATTGCTTCTCCGGATGCAATGCGCGTTGTTGGCCAGCTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAAGCGGTTAAAAACGCTAAAGCTGGCCAGGTT > 1:37960/1‑150 GACGTTGTTATTGCTTCTCCGGATGCAATGCGCGTTGTTGGCCAGCTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAAGCGGTTAAAAACGCTAAAGCTGGCCAGGTT > 1:2700489/1‑150 GACGTTGTTATTGCTTCTCCGGATGCAATGCGCGTTGTTGGCCAGCTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAAGCGGTTAAAAACGCTAAAGCTGGCCAGGTT > 1:237549/1‑150 ACGTTGTTATTGCTTCTCCGGATGCAATGCGCGTTGTTGGCCAGCTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAAGCGGTTAAAAACGCTAAAGCTGGCCAGGTTC < 2:1544703/150‑1 ACGTTGTTATTGCTTCTCCGGATGCAATGCGCGTTGTTGGCCAGCTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAAGCGGTTAAAAACGCTAAAGCTGGCCAGGTTC > 2:1869268/1‑150 ACGTTGTTATTGCTTCTCCGGATGCAATGCGCGTTGTTGGCCAGCTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAAGCGGTTAAAAACGCTAAAGCTGGCCAGGTTC > 2:237008/1‑150 CGTTGTTATTGCTTCTCCGGATGCAATGCGCGTTGTTGGCCAGCTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAAGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCG > 1:3330413/1‑150 CGTTGTTATTGCTTCTCCGGATGCAATGCGCGTTGTTGGCCAGCTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAAGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCG > 2:3483402/1‑150 GTTGTTATTGCTTCTCCGGATGCAATGCGCGTTGTTGGCCAGCTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAAGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGT > 1:773680/1‑150 GTTGTTATTGCTTCTCCGGATGCAATGCGCGTTGTTGGCCAGCTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAAGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGT > 2:2816528/1‑150 GTTGTTATTGCTTCTCCGGATGCAATGCGCGTTGTTGGCCAGCTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAAGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGT > 1:3120209/1‑150 GTTGTTATTGCTTCTCCGGATGCAATGCGCGTTGTTGGCCAGCTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAAGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGT > 1:167368/1‑150 GTTGTTATTGCTTCTCCGGATGCAATGCGCGTTGTTGGCCAGCTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAAGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGT > 2:64138/1‑150 TTGTTATTGCTTCTCCGGATGCAATGCGCGTTGTTGGCCAGCTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAAGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTT > 1:1718967/1‑150 TTGTTATTGCTTCTCCGGATGCAATGCGCGTTGTTGGCCAGCTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAAGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTT > 1:1413127/1‑150 TTGTTATTGCTTCTCCGGATGCAATGCGCGTTGTTGGCCAGCTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAAGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTT < 1:3893761/150‑1 TGTTATTGCTTCTCCGGATGCAATGCGCGTTGTTGGCCAGCTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAAGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTA < 2:3212008/150‑1 TGTTATTGCTTCTCCGGATGCAATGCGCGTTGTTGGCCAGCTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAAGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTA < 1:1597908/150‑1 TGTTATTGCTTCTCCGGATGCAATGCGCGTTGTTGGCCAGCTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAAGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTA < 1:1425650/150‑1 GTTATTGCTTCTCCGGATGCGATGCGCGTTGTTGGCCAGCTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAAGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTAC > 1:1786641/1‑150 GTTATTGCTTCTCCGGATGCAATGCGCGTTGTTGGCCAGCTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAAGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTAC > 2:689131/1‑150 CGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAAGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACGGTAACGAACCTGGCCAGCTTTAGCGTTTTTAACCCCTTCAGCAACGTTCGGTGTTACAGTA > 2:3104165/1‑150 CGTTGCTGAAGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACGGTAACGAACCTGGCCAGCTTTAGCGTTTTTAACCGCTTCAGCAACGTTCGGTGTTACAGTACCCACTTTCGGGTTTGGCATCAGGCCGCGCGGACCCAGA > 2:1209205/1‑147 CGTTGCTGAAGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACGGTAACGAACCTGGCCAGCTTTAGCGTTTTTAACCGCTTCAGCAACGTTCGGTGTTACAGTACCCACTTTCGGGTTTGGCATCAGGCCGCGCGGACCCAGA < 1:1209205/147‑1 AAACGCTAAAGCTGGCCAGGTTCGTTACGGTAACGAACCTGGCCAGCTTTAGCGTTTTTAACCGCTTCAGCAACGTTCGGTGTTACAGTACCCACTTTCGGGTTTGGCATCAGGCCGCGCGGACCCAGAACCTGGCCCAGCTGGCCAACA > 2:1203206/1‑150 CTAAAGCTGGCCAGGTTCGTTACGGTAACGAACCTGGCCAGCTTTAGCGTTTTTAACCGCTTCAGCAACGTTCGGTGTTACAGTACCCACTTTCGG < 1:2869530/96‑1 CTAAAGCTGGCCAGGTTCGTTACGGTAACGAACCTGGCCAGCTTTAGCGTTTTTAACCGCTTCAGCAACGTTCGGTGTTACAGTACCCACTTTCGG > 2:2869530/1‑96 AAGCTGGCCAGGTTCGTTACGGTAACGAACCTGGCCAGCTTTAGCGTTTTTAACCGCTTCAGCAACGTTCGGTGTTACAGTACCCACTTTCGGGTTTGGCATCAGGCCGCGCGGACCCAGAACCTGGCCCAGCTGGCCAACAACGCGCAT < 1:1203206/150‑1 GGCCAGGTTCGTTACGGTAACGAACCTGGCCAGCTTTAGCGTTTTTAACCGCTTCAGCAACGTTCGGTGTTACAGTACCCACTTTCGGGTTTGGCATCAGGCCGCGCGGACCCAGAACCTGGCCCAGCTGGCCAACAACGCGCATTGCAT > 2:1980773/1‑150 TCGTTACGGTAACGAACCTGGCCAGCTTTAGCGTTTTTAACCGCTTCAGCAACGTTCGGTGTTACAGTACCCACTTTCGGGTTTGGCATCAGGCCGCGCGGACCCAGAACCTGGCCCAGCTGGCCAACAACGCGCATTGCATCCGGAGAA < 1:3394389/150‑1 TCGTTACGGTAACGAACCTGGCCAGCTTTAGCGTTTTTAACCGCTTCAGCAACGTTCGGTGTTACAGTACCCACTTTCGGGTTTGGCATCAGGCCGCGCGGACCCAGAACCTGGCCCAGCTGGCCAACAACGCGCATTGCATCCGGAGAA < 2:2028434/150‑1 CGTTACGGTAACGAACCTGGCCAGCTTTAGCGTTTTTAACCGCTTCAGCAACGTTCGGTGTTACAGTACCCACTTTCGGGTTTGGCATCAGGCCGCGCGGACCCAGAACCTGGCCCAGCTGGCCAACAACGCGCATTGCATCCGGAGAAG > 2:960631/1‑150 CGTTACGGTAACGAACCTGGCCAGCTTTAGCGTTTTTAACCGCTTCAGCAACGTTCGGTGTTACAGTACCCACTTTCGGGTTTGGCATCAGGCCGCGCGGACCCAGAACCTGGCCCAGCTGGCCAACAACGCGCATTGCATCCGGAGAAG < 1:4186605/150‑1 CGTTACGGTAACGAACCTGGCCAGCTTTAGCGTTTTTAACCGCTTCAGCAACGTTCGGTGTTACAGTACCCACTTTCGGGTTTGGCATCAGGCCGCGCGGACCCAGAACCTGGCCCAGCTGGCCAACAACGCGCATTGCATCCGGAGAAG < 2:419578/150‑1 CGTTACGGTAACGAACCTGGCCAGCTTTAGCGTTTTTAACCGCTTCAGCAACGTTCGGTGTTACAGTACCCACTTTCGGGTTTGGCATCAGGCCGCGCGGACCCAGAACCTGGCCCAGCTGGCCAACAACGCGCATTGCATCCGGAGAAG > 2:3693305/1‑150 CGTTACGGTAACGAACCTGGCCAGCTTTAGCGTTTTTAACCGCTTCAGCAACGTTCGGTGTTACAGTACCCACTTTCGGGTTTGGCATCAGGCCGCGCGGACCCAGAACCTGGCCCAGCTGGCCAACAACGCGCATTGCATCCGGAGAAG > 1:2227077/1‑150 CGTTACGGTAACGAACCTGGCCAGCTTTAGCGTTTTTAACCGCTTCAGCAACGTTCGGTGTTACAGTACCCACTTTCGGGTTTGGCATCAGGCCGCGCGGACCCAGAACCTGGCCCAGCTGGCCAACAACGCGCATTGCATCCGGAGAAG < 2:2673677/150‑1 GTTACGGTAACGAACCTGGCCAGCTTTAGCGTTTTTAACCGCTTCAGCAACGTTCGGTGTTACAGTACCCACTTTCGGGTTTGGCATCAGGCCGCGCGGACCCAGAACCTGGCCCAGCTGGCCAACAACGCGCATTGCATCCGGAGAAGC < 1:320975/150‑1 GTTACGGTAACGAACCTGGCCAGCTTTAGCGTTTTTAACCGCTTCAGCAACGTTCGGTGTTACAGTACCCACTTTCGGGTTTGGCATCAGGCCGCGCGGACCCAGAACCTGGCCCAGCTGGCCAACAACGCGCATTGCATCCGGAGAAGC < 2:536212/150‑1 GTTACGGTAACGAACCTGGCCAGCTTTAGCGTTTTTAACCGCTTCAGCAACGTTCGGTGTTACAGTACCCACTTTCGGGTTTGGCATCAGGCCGCGCGGACCCAGAACCTGGCCCAGCTGGCCAACAACGCGCATTGCATCCGGAGAAGC < 1:1476244/150‑1 TTACGGTAACGAACCTGGCCAGCTTTAGCGTTTTTAACCGCTTCAGCAACGTTCGGTGTTACAGTACCCACTTTCGGGTTTGGCATCAGGCCGCGCGGACCCAGAACCTGGCCCAGCTGGCCAACAACGCGCATTGCATCCGGAGAAGCA < 2:1268337/150‑1 TTACGGTAACGAACCTGGCCAGCTTTAGCGTTTTTAACCGCTTCAGCAACGTTCGGTGTTACAGTACCCACTTTCGGGTTTGGCATCAGGCCGCGCGGACCCAGAACCTGGCCCAGCTGGCCAACAACGCGCATTGCATCCGGAGAAGCA > 1:4307886/1‑150 TACGGTAACGAACCTGGCCAGCTTTAGCGTTTTTAACCGCTTCAGCAACGTTCGGTGTTACAGTACCCACTTTCGGGTTTGGCATCAGGCCGCGCGGACCCAGAACCTGGCCCAGCTGGCCAACAACGCGCATTGCATCCGGAGAAGCAA < 1:4231577/150‑1 TACGGTAACGAACCTGGCCAGCTTTAGCGTTTTTAACCGCTTCAGCAACGTTCGGTGTTACAGTACCCACTTTCGGGTTTGGCATCAGGCCGCGCGGACCCAGAACCTGGCCCAGCTGGCCAACAACGCGCATTGCATCCGGAGAAGCAA > 1:4140122/1‑150 TACGGTAACGAACCTGGCCAGCGTTAGCGTTTTTAACCGCTTCAGCAACGTTCGGTGTTACAGTACCCACTTTCGGGTTTGGCATCAGGCCGCGCGGACCCAGAACCTGGCCCAGCTGGCCAACAACGCGCATTGCATCCGGAGAAGCAA < 1:4115059/150‑1 ACGGTAACGAACCTGGCCAGCTTTAGCGTTTTTAACCGCTTCAGCAACGTTCGGTGTTACAGTACCCACTTTCGGGTTTGGCATCAGGCCGCGCGGACCCAGAACCTGGCCCAGCTGGCCAACAACGCGCATTGCATCCGGAGAAGCAAT > 2:3202636/1‑150 ACGGTAACGAACCTGGCCAGCTTTAGCGTTTTTAACCGCTTCAGCAACGTTCGGTGTTACAGTACCCACTTTCGGGTTTGGCATCAGGCCGCGCGGACCCAGAACCTGGCCCAGCTGGCCAACAACGCGCATTGCATCCGGAGAAGCAAT < 1:3309296/150‑1 ACGGTAACGAACCTGGCCAGCTTTAGCGTTTTTAACCGCTTCAGCAACGTTCGGTGTTACAGTACCCACTTTCGGGTTTGGCATCAGGCCGCGCGGACCCAGAACCTGGCCCAGCTGGCCAACAACGCGCATTGCATCCGGAGAAGCAAT < 2:1534519/150‑1 CGGTAACGAACCTGGCCAGCTTTAGCGTTTTTAACCGCTTCAGCAACGTTCGGTGTTACAGTACCCACTTTCTGGTTTGGCATCAGGCCGCGCGGACCCAGAACCTGGCCCAGCTGGCCAACAACGCGCATTGCATCCGGAGAAGCAATA < 2:317845/150‑1 CGGTAACGAACCTGGCCAGCTTTAGCGTTTTTAACCGCTTCAGCAACGTTCGGTGTTACAGTACCCACTTTCGGGTTTGGCATCAGGCCGCGCGGACCCAGAACCTGGCCCAGCTGGCCAACAACGCGCATTGCATCCGGAGAAGCAATA < 2:2895592/150‑1 CGGTAACGAACCTGGCCAGCTTTAGCGTTTTTAACCGCTTCAGCAACGTTCGGTGTTACAGTACCCACTTTCGGGTTTGGCATCAGGCCGCGCGGACCCAGAACCTGGCCCAGCTGGCCAACAACGCGCATTGCATCCGGAGAAGCAATA > 2:2379073/1‑150 CGGTAACGAACCTGGCCAGCTTTAGCGTTTTTAACCGCTTCAGCAACGTTCGGTGTTACAGTACCCACTTTCGGGTTTGGCATCAGGCCGCGCGGACCCAGAACCTGGCCCAGCTGGCCAACAACGCGCATTGCATCCGGAGAAGCAATA > 1:1301645/1‑150 GACGTTGTTATTGCTTCTCCGGATGCAATGCGCGTTGTTGGCCAGCTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAAGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP012306/3608425‑3608580 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgttacGGTAACGAACCTGGCCAGCTTTAGCGTTTTTAACCGCTTCAGCAACGTTCGGTGTTACAGTACCCACTTTCGGGTTTGGCATCAGGCCGCGCGGACCCAGAACCTGGCCCAGCTGGCCAACAACGCGCATTGCATCCGGAGAAGCAATA < AP012306/3608581‑3608433 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |