| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP012306 | 1856463 = | 213 (0.720) | 5 (0.020) | 5/274 | 19.1 | 2.5% | coding (1685/1761 nt) | yejH | predicted ATP‑dependet helicase |
| ? | AP012306 | 1856475 = | 196 (0.720) | coding (1697/1761 nt) | yejH | predicted ATP‑dependet helicase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
AACAGGTAAGTGATCTGCTTTGCGTATGCAAAAGCGGGCGAGATTCTATACTCAATCGCCTTATACATCAATCAAAACTACCATTAACCGCGTAATTCGTGCGCCAGACGAAAACGACCTTCGTAATCGAACACTTTTTCACGCACCTGCCAGTACTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP012306/1856622‑1856463‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccagtactggcAGGTGCGTGAAAAAGTGTTCGATTACGAAGGTCGTTTTCGTCTGGCGCACGAATTACGCGGTTAATGGTAGTTTTGATTGATGTATAAGGCGATTGAGTATAGAATCTCGCCCGCTTTTGCATACGCAAAGCAGATCACTTACCTGTTG > AP012306/1856475‑1856623 AACAGGTAAGTGATCTGCTTTGCGTATGCAAAAGCGGGCGAGATTCTATACTCAATCGCCTTATACATCAATCAAAACTACCATTAACCGCGTAATTCGTGCGCCAGACGAAAACGACCTTCGTAATCGAACACTTTTTCACGCACCTGC < 2:1904370/150‑1AACAGGTAAGTGATCTGCTTTGCGTATGCAAAAGCGGGCGAGATTCTATACTCAATCGCCTTATACATCAATCAAAACTACCATTAACCGCGTAATTCGTGCGCCAGACGAAAACGACCTTCGTAATCGAACACTTTTTCACGCACCTGC < 2:1862038/150‑1 CAGGTAAGTGATCTGCTTTGCGTATGCAAAAGCGGGCGAGATTCTATACTCAATCGCCTTATACATCAATCAAAACTACCATTAACCGCGTAATTCGTGCGCCAGACGAAAACGACCTTCGTAATCGAACACTTTTTCACGCACCTGCCA < 1:1858929/150‑1 GTAAGTGATCTGCTTTGCGTATGCAAAAGCGGGCGAGATTCTATACTCAATCGCCTTATACATCAATCAAAACTACCATTAACCGCGTAATTCGTGCGCCAGACGAAAACGACCTTCGTAATCGAACACTTTTTCACGCACCTGCCAGTA > 2:2316419/1‑150 GTAAGTGATCTGCTTTGCGTATGCAAAAGCGGGCGAGATTCTATACTCAATCGCCTTATACATCAATCAAAACTACCATTAACCGCGTAATTCGTGCGCCAGACGAAAACGACCTTCGTAATCGAACACTTTTTCACGCACCTGCCAGTA > 2:1831899/1‑150 AGTGATCTGCTTTGCGTATGCAAAAGCGGGCGAGATTCTATACTCAATCGCCTTATACATCAATCAAAACTACCATTAACCGCGTAATTCGTGCGCCAGACGAAAACGACCTTCGTAATCGAACACTTTTTCACGCACCTGCCAGTACTG > 1:3552867/1‑150 GTGATCTGCTTTGCGTATGCAAAAGCGGGCGAGATTCTATACTCAATCGCCTTATACATCAATCAAAACTACCATTAACCGCGTAATTCGTGCGCCAGACGAAAACGACCTTCGTAATCGAACACTTTTTCACGCACCTGCCAGTACTGG > 1:137622/1‑150 TGATCTGCTTTGCGTATGAAAAAGCGGGCGAGATTCTATACTCAATCGCCTTATACATCAATCAAAACTACCATTAACCGCGTAATTCGTGCGCCAGACGAAAACGACCTTCGTAATCGAACACTTTTTCACGCACCTGCCAGTACTGGC < 2:395672/150‑1 GCGTATGCAAAAGCGGGCGAGATTCTATACTCAATCGCCTTATACATCAATCAAAACTACCATTAACCGCGTAATTCGTGCGCCAGACGAAAACGACCTTCGTAATCGAACACTTTTTCACGAACCTGCCAGTACTGGCAGGTGCGTGAA < 2:226386/150‑1 ATACTCAATCGCCTTATACATCAATCAAAACTACCATTAACCGCGTAATTCGTGCGCCAGACGAAAACGACCTTCGTAATCGAACACTTTTTCACGCACCTGCCAGTACTGGCAGGTGCGTGAAAAAGTGTTCGATTACGAAGGTCGTTT > 1:2730560/1‑150 GACGAAAACGACCTTCGTAATCGAACACTTTTTCACGCACCTGCCAGTACTGGCAGGTGCGTGAAAAAGTGTTCGATTACGAAGGTCGTTTTCGTCTGGCGCACGAATTACGCGGTTAATGGTAGTTTTGATTGATGTATAAGGCGATTG > 2:2730560/1‑150 CGACCTTCGTAATCGAACACTTTTTCACGCACCTGCCAGTACTGGCAGGTGCGTGAAAAAGTGTTCGATTACGAAGGTCGTTTTCGTCTGGCGCACGAATTACGCGGTT < 1:3856322/109‑1 CGACCTTCGTAATCGAACACTTTTTCACGCACCTGCCAGTACTGGCAGGTGCGTGAAAAAGTGTTCGATTACGAAGGTCGTTTTCGTCTGGCGCACGAATTACGCGGTT > 2:3856322/1‑109 CCAGTACTGGCAGGTGCGTGAAAAAGTGTTCGATTACGAAGGTCGTTTTCGTCTGGCGCACGAATTACGCGGTTAATGGTAGTTTTGATTGATGTATAAGGCGATTGAGTATAGAATCTCGCCCGCTTTTGCATACGCAAAGCAGATCAC < 1:3041417/150‑1 AGTACTGGCAGGTGCGTGAAAAAGTGTTCGATTACGAAGGTCGTTTTCGTCTGGCGCACGAATTACGCGGTTAATGGTAGTTTTGATTGATGTATAAGGCGATTGAGTATAGAATCTCGCCCGCTTTTGCATACGCAAAGCAGATCACTT > 2:1977070/1‑150 GTACTGGCAGGTGCGTGAAAAAGTGTTCGATTACGAAGGTCGTTTTCGTCTGGCGCACGAATTACGCGGTTAATGGTAGTTTTGATTGATGTATAAGGCGATTGAGTATAGAATCTCGCCCGCTTTTGCATACGCAAAGCAGATCACTTA < 1:2838188/150‑1 GGCAGGTGCGTGAAAAAGTGTTCGATTACGAAGGTCGTTTTCGTCTGGCGCACGAATTACGCGGTTAATGGTAGTTTTGATTGATGTATAAGGCGATTGAGTATAGAATCTCGCCCGCTTTTGCATACGCAAAGCAGATCACTTACCTGT > 1:1141733/1‑150 GCAGGTGCGTGAAAAAGTGTTCGATTACGAAGGTCGTTTTCGTCTGGCGCACGAATTACGCGGTTAATGGTAGTTTTGATTGATGTATAAGGCGATTGAGTATAGAATCTCGCCCGCTTTTGCATACGCAAAGCAGATCACTTACCTGTT > 2:3371829/1‑150 CAGGTGCGTGAAAAAGTGTTCGATTACGAAGGTCGTTTTCGTCTGGCGCACGAATTACGCGGTTAATGGTAGTTTTGATTGATGTATAAGGCGATTGAGTATAGAATCTCGCCCGCTTTTGCATACGCAAAGCAGATCACTTACCTGTTG < 1:3367703/150‑1 AACAGGTAAGTGATCTGCTTTGCGTATGCAAAAGCGGGCGAGATTCTATACTCAATCGCCTTATACATCAATCAAAACTACCATTAACCGCGTAATTCGTGCGCCAGACGAAAACGACCTTCGTAATCGAACACTTTTTCACGCACCTGCCAGTACTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP012306/1856622‑1856463‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccagtactggcAGGTGCGTGAAAAAGTGTTCGATTACGAAGGTCGTTTTCGTCTGGCGCACGAATTACGCGGTTAATGGTAGTTTTGATTGATGTATAAGGCGATTGAGTATAGAATCTCGCCCGCTTTTGCATACGCAAAGCAGATCACTTACCTGTTG > AP012306/1856475‑1856623 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |