| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP012306 | = 3014868 | 349 (1.180) | 7 (0.030) | 7/274 | 17.9 | 2.1% | coding (930/1506 nt) | glpD | sn‑glycerol‑3‑phosphate dehydrogenase, aerobic, FAD/NAD(P)‑binding |
| ? | AP012306 | = 3014856 | 323 (1.190) | coding (918/1506 nt) | glpD | sn‑glycerol‑3‑phosphate dehydrogenase, aerobic, FAD/NAD(P)‑binding | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TCGTGATCCCGTGGATGGACGAGTTTTCCATCATCGGCACTACCGATGTCGAGTACAAAGGCGATCCGAAAGCGGTGAAGATTGAAGAGAGTGAAATCAATTACCTGCTGAATGTGTATAACACGCACTTTAAAAAGCAGTTAAGCCGTGACGATATCGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP012306/3014708‑3014868‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacgatatcgtcACGGCTTAACTGCTTTTTAAAGTGCGTGTTATACACATTCAGCAGGTAATTGATTTCACTCTCTTCAATCTTCACCGCTTTCGGATCGCCTTTGTACTCGACATCGGTAGTGCCGATGATGGAAAACTCGTCCATCCACGGGATCACG < AP012306/3014856‑3014709 TCGTGATCCCGTGGATGGACGAGTTTTCCATCATCGGCACTACCGATGTCGAGTACAAAGGCGATCCGAAAGCGGTGAAGATTGAAGAGAGTGAAATCAATTACCTGCTGAATGTGTATAACACGCACTTTAAAAAGCAGTTAAGCCGTG > 2:2756675/1‑150TCGTGATCCCGTGGATGGACGAGTTTTCCATCATCGGCACTACCGATGTCGAGTACAAAGGCGATCCGAAAGCGGTGAAGATTGAAGAGAGTGAAATCAATTACCTGCTGAATGTGTATAACACGCACTTTAAAAAGCAGTTAAGCCGTG < 1:3339547/150‑1 CGTGATCCCGTGGATGGACGAGTTTTCCATCATCGGCACTACCGATGTCGAGTACAAAGGCGATCCGAAAGCGGTGAAGATTGAAGAGAGTGAAATCAATTACCTGCTGAATGTGTATAACACGCACTTTAAAAAGCAGTTAAGCCGTGA > 1:2304689/1‑150 GTGATCCCGTGGATGGACGAGTTTTCCATCATCGGCACTACCGATGTCGAGTACAAAGGCGATCCGAAAGCGGTGAAGATTGAAGAGAGTGAAATCAATTACCTGCTGAATGTGTATAACACGCACTTTAAAAAGCAGTTAAGCCGTGAC > 2:356664/1‑150 TGATCCCGTGGATGGACGAGTTTTCCATCATCGGCACTACCGATGTCGAGTACAAAGGCGATCCGAAAGCGGTGAAGATTGAAGAGAGTGAAATCAATTACCTGCTGAATGTGTATAACACGCACTTTAAAAAGCAGTTAAGCCGTGACG < 2:2623197/150‑1 TGATCCCGTGGATGGACGAGTTTTCCATCATCGGCACTACCGATGTCGAGTACAAAGGCGATCCGAAAGCGGTGAAGATTGAAGAGAGTGAAATCAATTACCTGCTGAATGTGTATAACACGCACTTTAAAAAGCAGTTAAGCCGTGACG > 1:2680462/1‑150 GATCCCGTGGATGGACGAGTTTTCCATCATCGGCACTACCGATGTCGAGTACAAAGGCGATCCGAAAGCGGTGAAGATTGAAGAGAGTGAAATCAATTACCTGCTGAATGTGTATAACACGCACTTTAAAAAGCAGTTAAGCCGTGACGA > 1:3362317/1‑150 GATCCCGTGGATGGACGAGTTTTCCATCATCGGCACTACCGATGTCGAGTACAAAGGCGATCCGAAAGCGGTGAAGATTGAAGAGAGTGAAATCAATTACCTGCTGAATGTGTATAACACGCACTTTAAAAAGCAGTTAAGCCGTGACGA > 1:635483/1‑150 ATCCCGTGGATGGACGAGTTTTCCATCATCGGCACTACCGATGTCGAGTACAAAGGCGATCCGAAAGCGGTGAAGATTGAAGAGAGTGAAATCAATTACCTGCTGAATGTGTATAACACGCACTTTAAAAAGCAGTTAAGCCGTGACGAT > 2:2069070/1‑150 CCCGTGGATGGACGAGTTTTCCATCATCGGCACTACCGATGTCGAGTACAAAGGCGATCCGAAAGCGGTGAAGATTGAAGAGAGTGAAATCAATTACCTGCTGAATGTGTATAACACGCACTTTAAAAAGCAGTTAAGCCGTGACGATAT < 2:1065886/150‑1 CCGTGGATGGACGAGTTTTCCATCATCGGCACTACCGATGTCGAGTACAAAGGCGATCCGAAAGCGGTGAAGATTGAAGAGAGTGAAATCAATTACCTGCTGAATGTGTATAACACGCACTTTAAAAAGCAGTTAAGCCGTGACGATATC > 2:387381/1‑150 GTGGATGGACGAGTTTTCCATCATCGGCACTACCGATGTCGAGTACAAAGGCGATCCGAAAGCGGTGAAGATTGAAGAGAGTGAAATCAATTACCTGCTGAATGTGTATAACACGCACTTTAAAAAGCAGTTAAGCCGTGACGATATCGT > 1:2275774/1‑150 TGGATGGACGAGTTTTCCATCATCGGCACTACCGATGTCGAGTACAAAGGCGATCCGAAAGCGGTGAAGATTGAAGAGAGTGAAATCAATTACCTGCTGAATGTGTATAACACGCACTTTAAAAAGCAGTTAAGCCGTGACGATATCGTC > 2:400798/1‑150 TGGATGGACGAGTTTTCCATCATCGGCACTACCGATGTCGAGTACAAAGGCGATCCGAAAGCGGTGAAGATTGAAGAGAGTGAAATCAATTACCTGCTGAATGTGTATAACACGCACTTTAAAAAGCAGTTAAGCCGTGACGATATCGTC > 2:3565571/1‑150 GACGAGTTTTCCATCATCGGCACTACCGATGTCGAGTACAAAGGCGATCCGAAAGCGGTGAAGATTGAAGAGAGTGAAATCAATTACCTGCTGAATGTGTATAACACGCACTTTAAAAAGCAGTTAAGCCGTGACGATATCGTCACGGCT > 1:702367/1‑150 CCATCATCGGCACTACCGATGTCGAGTACAAAGGCGATCCGAAAGCGGTGAAGATTGAAGAGAGTGAAATCAATTACCTGCTGAATGTGTATAACACGCACTTTAAAAAGCAGTTAAGCCGTGACGATATCGTCACGGCTTAACTGCTTT < 2:702367/150‑1 GCGATCCGAAAGCGGTGAAGATTGAAGAGAGTGAAATCAATTACCTGCTGAATGTGTATAACACGCACTTTAAAAAGCAGTTAAGCCGTGACGATATCGTCACGGCTTAACTGCTTTTTAAAGTGCG > 1:3507260/1‑127 CCGAAAGCGGTGAAGATTGAAGAGAGTGAAATCAATTACCTGCTGAATGTGTATAACACGCACTTTAAAAAGCAGTTAAGCCGTGACGATATCGTCACGGCTTAACTGCTTTTTAAAGTGCGTGTTATACACATTCAGCAGGTAATTGAT < 2:517223/150‑1 CACGCACTTTAAAAAGCAGTTAAGCCGTGACGATATCGTCACGGCTTAACTGCTTTTTAAAGTGCGTGTTATACACATTCAGCAGGTAATTGATTTCACTCTCTTCAATCTTCACCGCTTTCGGATCGCCTTTGTACTCGACATCGGTAG > 2:1599244/1‑150 CGCACTTTAAAAAGCAGTTAAGCCGTGACGATATCGTCACGGCTTAACTGCTTTTTAAAGTGCGTGTTATACACATTCAGCAGGTAATTGATTTCACTCTCTTCAATCTTCACCGCTTTCGGATCGC > 2:3507260/1‑127 AAAAGCAGTTAAGCCGTGACGATATCGTCACGGCTTAACTGCTTTTTAAAGTGCGTGTTATACACATTCAGCAGGTAATTGATTTCACTCTCTTCAATCTTCACCGCTTTCGGATCGCCTTTGTACTCGACATCGGTAGTGCCGATGATG > 2:3115286/1‑150 GACGATATCGTCACGGCTTAACTGCTTTTTAAAGTGCGTGTTATACACATTCAGCAGGTAATTGATTTCACTCTCTTCAATCTTCACCGCTTTCGGATCGCCTTTGTACTCGACATCGGTAGTGCCGATGATGGAAAACTCGTCCATCCA > 2:2698269/1‑150 ACGATATCGTCACGGCTTAACTGCTTTTTAAAGTGCGTGTTATACACATTCAGCAGGTAATTGATTTCACTCTCTTCAATCTTCACCGCTTTCGGATCGCCTTTGTACTCGACATCGGTAGTGCCGATGATGGAAAACTCGTCCATCCAC > 2:2038376/1‑150 CGATATCGTCACGGCTTAACTGCTTTTTAAAGTGCGTGTTATACACATTCAGCAGGTAATTGATTTCACTCTCTTCAATCTTCACCGCTTTCGGATCGCCTTTGTACTCGACATCGGTAGTGCCGATGATGGAAAACTCGTCCATCCACG < 1:1706849/150‑1 GATATCGTCACGGCTTAACTGCTTTTTAAAGTGCGTGTTATACACATTCAGCAGGTAATTGATTTCACTCTCTTCAATCTTCACCGCTTTCGGATCGCCTTTGTACTCGACATCGGTAGTGCCGATGATGGAAAACTCGTCCATCCACGG > 1:2209934/1‑150 ATATCGTCACGGCTTAACTGCTTTTTAAAGTGCGTGTTATACACATTCAGCAGGTAATTGATTTCACTCTCTTCAATCTTCACCGCTTTCGGATCGCCTTTGTACTCGACATCGGTAGTGCCGATGATGGAAAACTCGTCCATCCACGGG < 2:1292726/150‑1 ATATCGTCACGGCTTAACTGCTTTTTAAAGTGCGTGTTATACACATTCAGCAGGTAATTGATTTCACTCTCTTCAATCTTCACCGCTTTCGGATCGCCTTTGTACTCGACATCGGTAGTGCCGATGATGGAAAACTCGTCCATCCACGGG < 1:644070/150‑1 ATATCGTCACGGCTTAACTGCTTTTTAAAGTGCGTGTTATACACATTCAGCAGGGAATTGATTTCACTCTCTTCAATCTTCACCGCTTTCGGATCGCCTTTGTACTCGACATCGGTAGTGCCGATGATGGAAAACTCGTCCATCCACGGG > 2:3531325/1‑150 TATCGTCACGGCTTAACTGCTTTTTAAAGTGCGTGTTATACACATTCAGCAGGTAATTGATTTCACTCTCTTCAATCTTCACCGCTTTCGGATCGCCTTTGTACTCGACATCGGTAGTGCCGATGATGGAAAACTCGTCCATCCACGGGA < 2:2272794/150‑1 TATCGTCACGGCTTAACTGCTTTTTAAAGTGCGTGTTATACACATTCAGCAGGTAATTGATTTCACTCTCTTCAATCTTCACCGCTTTCGGATCGCCTTTGTACTCGACATCGGTAGTGCCGATGATGGAAAACTCGTCCATCCACGGGA > 1:2593884/1‑150 ATCGTCACGGCTTAACTGCTTTTTAAAGTGCGTGTTATACACATTCAGCAGGTAATTGATTTCACTCTCTTCAATCTTCACCGCTTTCGGATCGCCTTTGTACTCGACATCGGTAGTGCCGATGATGGAAAACTCGTCCATCCACGGGAT < 2:2493332/150‑1 ATCGTCACGGCTTAACTGCTTTTTAAAGTGCGTGTTATACACATTCAGCAGGTAATTGATTTCACTCTCTTCAATATTCACCGCTTTCGGATCGCCTTTGTACTCGACATCGGTAGTGCCGATGATGGAAAACTCGTCCATCCACGGGAT > 2:1958028/1‑150 CGTCACGGCTTAACTGCTTTTTAAAGTGCGTGTTATACACATTCAGCAGGTAATTGATTTCACTCTCTTCAATCTTCACCGCTTTCGGATCGCCTTTGTACTCGACATCGGTAGTGCCGATGATGGAAAACTCGTCCATCCACGGGATCA < 2:3053873/150‑1 CGTCACGGCTTAACTGCTTTTTAAAGTGCGTGTTATACACATTCAGCAGGTAATTGATTTCACTCTCTTCAATCTTCACCGCTTTCGGATCGCCTTTGTACTCGACATCGGTAGTGCCGATGATGGAAAACTCGTCCATCCACGGGATCA > 1:2414466/1‑150 GTCACGGCTTAACTGCTTTTTAAAGTGCGTGTTATACACATTCAGCAGGTAATTGATTTCACTCTCTTCAATCTTCACCGCTTTCGGATCGCCTTTGTACTCGACATCGGTAGTGCCGATGATGGAAAACTCGTCCATCCACGGGATCAC < 1:1142328/150‑1 TCACGGCTTAACTGCTTTTTAAAGTGCGTGTTATACACATTCAGCAGGTAATTGATTTCACTCTCTTCAATCTTCACCGCTTTCGGATCGCCTTTGTACTCGACATCGGTAGTGCCGATGATGGAAAACTCGTCCATCCACGGGATCACG > 2:1415503/1‑150 TCGTGATCCCGTGGATGGACGAGTTTTCCATCATCGGCACTACCGATGTCGAGTACAAAGGCGATCCGAAAGCGGTGAAGATTGAAGAGAGTGAAATCAATTACCTGCTGAATGTGTATAACACGCACTTTAAAAAGCAGTTAAGCCGTGACGATATCGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP012306/3014708‑3014868‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacgatatcgtcACGGCTTAACTGCTTTTTAAAGTGCGTGTTATACACATTCAGCAGGTAATTGATTTCACTCTCTTCAATCTTCACCGCTTTCGGATCGCCTTTGTACTCGACATCGGTAGTGCCGATGATGGAAAACTCGTCCATCCACGGGATCACG < AP012306/3014856‑3014709 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |