Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | AP012306 | 3,020,670 | 0 | T | G | 26.0% | 385.8 / 15.2 | 196 | K195N (AAA→AAC) | glgC | glucose‑1‑phosphate adenylyltransferase |
Reads supporting (aligned to +/- strand): ref base T (94/51); new base G (51/0); total (145/51) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.50e-08 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
Only 100 of 278 total aligned reads displayed.
ATCAAATCTTTGCCAAAGTCGTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGTTTTTCAACGAA‑TTCGATAATTTTA‑TCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGATAAGCATACGCGAGTAGTCTTGCT > AP012306/3020521‑3020818 | tCAAATCTTTGCCAAAGTCGTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATGCTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGtt < 1:2021314/150‑1 (MQ=255) cAAATCTTTGCCAAAGTCGTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGttt < 2:365794/150‑1 (MQ=255) aaaTCTTTGCCAAAGTCGTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGtttt < 2:3355387/150‑1 (MQ=255) aaaTCTTTGCCAAAGTCGTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGGTAGGAGGgttt > 2:2259872/1‑150 (MQ=255) aaTCTTTGCCAAAGTCGTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGGTAGCAGGgtttt > 2:446214/1‑150 (MQ=255) aaTCTTTGCCAAAGTCGTGGCTGGAGTTCCCATCGCGATGGGCTTCTTCCAGCCCTTCAGACAGATAGTCAGCGGCAAAGACGAATATACCCATACCCGCCAGAGCTTTGCTCGTACCGCTCTGCATTGACGGCCGGCTATCGCGttttt > 2:1061479/1‑150 (MQ=255) aTCTTTGCCAAAGTCGTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGGTTTTc > 1:358837/1‑150 (MQ=255) cTTTGCCAAAGTCGTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGGTTGCCGGGTTTTCaa > 2:2964467/1‑150 (MQ=255) tGCCAAAGTCGTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGTTTTTCAACGa < 2:811884/150‑1 (MQ=255) tGCCAAAGTCGTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGGTAGCAGGATTTTCAACGa > 1:1631448/1‑150 (MQ=255) gCCAAAGTCGTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGTTTTTCAACGaa > 1:4467667/1‑150 (MQ=255) cAAAGTCGTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGTTTTTCAACGAA‑tt < 2:504680/150‑1 (MQ=255) aGTCGTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGGTAGCAAGGTTTTCAACGAA‑ATCGa > 2:152338/1‑150 (MQ=255) gTCGTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGTTTTTCAACGAA‑TTCGAt < 1:1457671/150‑1 (MQ=255) tCGTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGTTTTTCAACGAA‑TTCGATa > 1:1931055/1‑150 (MQ=255) tGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATATTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGTTTTTCAACGAA‑TTCGATAAtt < 2:4138856/150‑1 (MQ=255) tGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGTTTTTCAACGAA‑TTCGATAAtt < 1:3463239/150‑1 (MQ=255) ggCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGTTTTTCAACGAA‑TTCGATAAttt < 1:2971571/150‑1 (MQ=255) gCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGTTTTTCAACGAA‑TTCGATAAtttt < 1:1750577/150‑1 (MQ=255) gCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGGTAGCAGGGTTTTCAACGAA‑TTCGATAAtttt > 1:972007/1‑150 (MQ=255) cTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGGTAGCAGGTTTTTCAACGAA‑TTCGATAATTTTa > 1:1203858/1‑150 (MQ=255) tGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGTTTTTCAACGAA‑TTCGATAATTTTA‑t < 2:3375924/150‑1 (MQ=255) tGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGTTTTTCAACGAA‑TTCGATAATTTTA‑t < 2:2586863/150‑1 (MQ=255) aGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGGTTTTCAACGAA‑TTCGATAATTTTT‑TCGt > 2:1994709/1‑150 (MQ=255) gTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGGTAGCAGGGTTTTTAACGAA‑TTCGATAATTTTA‑TCGtt > 2:2089271/1‑150 (MQ=255) ttCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGTTTTTCAACGAA‑TTCGATAATTTTA‑TCGTtc < 1:2755081/150‑1 (MQ=255) ctcgaaTCCCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGGCGTAGATGCCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGTTTTTCAACGAA‑TTCGATAATTTTA‑TCGTtc < 2:595476/145‑1 (MQ=255) ctcATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGGTTTTTAACGAA‑TTCGATAATTTTT‑TCGTtttc > 2:2159744/1‑150 (MQ=255) tcATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGTTTTTCAACGAA‑TTCGATAATTTTA‑TCGTTCtca > 2:2791159/1‑150 (MQ=255) tcATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGTTTTTCAACGAA‑TTCGATAATTTTA‑TCGTTCtca < 2:1842668/150‑1 (MQ=255) cgcgATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGTTTTTCAACGAA‑TTCGATAATTTTA‑TCGTTCTCATCaa < 2:3593857/150‑1 (MQ=255) gcgATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGTTTTTCAACGAA‑TTCGATAAttt > 2:923667/1‑134 (MQ=255) gcgATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGTTTTTCAACGAA‑TTCGATAATTTTA‑TCGTTCTCATCAAc < 1:3827861/150‑1 (MQ=255) gcgATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGTTTTTCAACGAA‑TTCGATAATTTTA‑TCGTTCTCATCAAc < 1:256732/150‑1 (MQ=255) cgATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGTTTTTCAACGAA‑TTCGATAATTTTA‑TCGTTCTCATCAAcc < 1:58130/150‑1 (MQ=255) gATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGTTTTTCAACGAA‑TTCGATAATTTTA‑TCGTTCTCATCAACCg < 2:2323857/150‑1 (MQ=255) gATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGTTTTTCAACGAA‑TTCGATAATTTTA‑TCGTTCTCATCAACCg > 2:245267/1‑150 (MQ=255) aTCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGTTTTTCAACGAA‑TTCGATAATTTTA‑TCGTTCTCATCAACCGc < 1:3338637/150‑1 (MQ=255) tCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGTTTTTTAACGAA‑TTCGATAATTTTA‑TCGTTCTCATCAAACGcc > 2:1728099/1‑150 (MQ=255) gTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGTTTTTCAACGAA‑TTTGGTAATTTTT‑TTTTTCTCATCAACCGCCAt > 2:1578991/1‑150 (MQ=255) ccAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGTTTTTCAACGAA‑TTCGATAATTTTA‑TCGTTCTCATCAACCGCCATAACGCCaa > 1:3177261/1‑150 (MQ=255) agcagTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGGTTTTCAACGAA‑TTCGATAATTTTA‑TCGTTCTCATCAACCGCCATAACGCCAAAt > 2:3919199/1‑150 (MQ=255) ttCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGTTTTTCAACGAA‑TTCGATAATTTTA‑TCGTTCTCATCAACCGCCATAACGCCAAATGCGGa > 2:1923902/1‑150 (MQ=255) cATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGGTTTTCAACGAA‑TTCGATAATTTTA‑TCGTTCTCATCAACCGCCATAACGCCAAATGCGGAgg > 1:788883/1‑150 (MQ=255) aaaGATAGCCGGCGCAAAAGACAAAGATCCCCATCCCCCCCAGATTTTTGCTCGGATCTTCCGGCATGGGCGGCGGTTTAGCAGTTTTTACAACAAA‑TTCGATATTTTTT‑TCTTTCAAACCACCCGCCATAACGCCAAATGCGGAGGctt < 2:4248144/148‑1 (MQ=255) aCAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGTTTTTCAACGAA‑TTCGATAATTTTA‑TCGTTCTCATCAACCGCCATAACGCCCAATGCGGAGGctt > 1:1082085/1‑150 (MQ=255) aCAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGTTTTTCAACGAA‑TTCGATAATTTTA‑TCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGctt > 1:3052092/1‑150 (MQ=255) cAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGGTAGCAGGTTTTTCAACGAA‑TTCGATAATTTTA‑TCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGcttc > 1:1540408/1‑150 (MQ=255) aTAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGGTTTTCAACGAA‑TTCGATAATTTTA‑TCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCttcttc > 1:2427740/1‑150 (MQ=255) tCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGCTAGCAAGGTTTTCAACAAA‑TTCAATAACTTTA‑TCCTTTTCATCAACCCCCAAAACCCCCAAATCGGGCGCCTTTTCAAtt > 2:4342122/1‑149 (MQ=255) ggCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGGTAGCAGGGTTTTCAACGAA‑TTCGATAATTTTA‑TCGTTCTCATCAACCGCCCTAACGCCAAATGCGGAGGCTTCTTCAATCgg > 2:69250/1‑150 (MQ=255) gCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGTTTTTCAACGAA‑TTCGATAATTTTA‑TCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGt > 1:3928922/1‑150 (MQ=255) tCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGGTTTTCAACGAA‑TTCGATAATTTTA‑TCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACt > 1:508471/1‑150 (MQ=255) tCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGGTAGCAGGTTTTTCAACGGA‑TTCGATAATTTTA‑TCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACt > 1:3243718/1‑150 (MQ=255) caaaaGATGTAGATCCCAATCCTCGCCAGAGTTTTGCTGGGATCGTTCGGCATTGGCGG‑GGGTTAAGAGGTTTTTTAAAAAATTTAGATATTTTTT‑TCTTTCTCACAAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACt < 2:342946/148‑1 (MQ=255) aaaGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGTTTTTCAACGAA‑TTCGATAATTTTA‑TCGTTCTCATCAACCGCCATAAAGCCAAATGCGGAGGCTTCTTCAATCGGTACttg > 2:431120/1‑148 (MQ=255) aGACGTAGATACACATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGGTTTTCAACGAA‑TTCGATAATTTTA‑TCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCa > 2:1316615/1‑150 (MQ=255) gTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGGTAGCAGGGTTTTCAACGAA‑TTCGATAATTTTA‑TCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACa > 1:2352586/1‑150 (MQ=255) tAGATCCCCATCCTCGCAAGAGATTTGCTGGTATCGTTCGGCATTGACGGGGGGTTAGCAGTTTTTAAAACAAA‑TTCAATATTTTTA‑TCTTTCTCACCACCCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACaa < 2:3519310/150‑1 (MQ=255) tAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGTTTTTCAACGAA‑TTCGATAATTTTA‑TCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACaa > 1:4140256/1‑150 (MQ=255) tAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGGTTTTCAACGAA‑TTCGATAATTTTA‑TCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACaa > 2:3751548/1‑150 (MQ=255) tAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGGTTTTCAACGAA‑TTCGATAATTTTA‑TCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACaa > 2:2537366/1‑150 (MQ=255) aGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGGTTTTTAACGAA‑ATCGATAATTTTT‑TCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCCTCTTCAATCGGTACTTGCATACAAg > 1:2300773/1‑150 (MQ=255) gATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGGTAGCAGGGTTTTCAACGAA‑TTCGATAATTTTA‑TCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGc > 1:3968457/1‑150 (MQ=255) aTACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGGTAGGAGGGGTTTCAACGAA‑TTCGATAATTTTA‑TGGTTTTCATCAACCGGCATAACGCCAAAAGCGGAGGCTTCTTCAATTGGTACTGGCATACAAGCa > 2:598977/1‑150 (MQ=255) aCCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGGTTTTCAACGAA‑TTTGATAATTTTA‑TCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCCTCTTCAATCGGTACTGGCATTCAAGCAAc > 1:896721/1‑150 (MQ=255) aCCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGGTAGCAGGGTTTTCAACGAA‑TTCGATAATTTTA‑TCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAAc > 1:4103100/1‑150 (MQ=255) aTACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGGTAGCAGGGTTTTTAACGCA‑TTCGATAATTTTA‑TCGGTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGGACTGGCATACAAGCAACgggg > 2:1128009/1‑148 (MQ=255) aCTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGATAGCAGGTTTTTCAACGAA‑TTCGATAATTTTA‑TCGTTCTCATCAACCGCCATAACGCCCAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAAACGTGCa > 1:2263401/1‑150 (MQ=255) cTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGGTAGCAGGTTTTTCAACGAA‑TTCGATAATTTTA‑TCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAACAACGGTGCaa > 1:2112779/1‑150 (MQ=255) tCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGTTTTTCAACGAA‑TTCGATAATTTTA‑TCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAAc > 1:4160436/1‑150 (MQ=255) gCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGGTTTTCAACGAA‑TTCGATAATTTTA‑TCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGt > 1:179927/1‑150 (MQ=255) agagATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGGTTTTCAACGAA‑TTCGATAATTTTA‑TCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTgcg > 1:3821758/1‑150 (MQ=255) agaTTTGCTCGGATCGTTCGGCATTGACGGCGGGGTAGCAGGTTTTTCAACGAA‑TTCGATAATTTTA‑TCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGcc > 1:1012972/1‑150 (MQ=255) gaTTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGTTTTTCAACGAA‑TTCGATAATTTTA‑TCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCt > 1:4541537/1‑150 (MQ=255) ttGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGGTTTTCAACGAA‑TTCGATAATTTTA‑TCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCtttt > 1:4590427/1‑150 (MQ=255) ttGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGGTTTTCAACCAA‑TTCCATAATTTTA‑TCGTTCTCATCAACCGCCATAACGCCAAATGCGGGGGCTTCTTCAATCGGTACTGGCATACAAGCAACCGTGCAACGTGCGCCtttt > 2:2473609/1‑150 (MQ=255) cTCGGATCGTTCGGCATTGACGGCGGGGTAGCAGGTTTTTCAACGAA‑TTCGATAATTTTA‑TAGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCg > 2:2809541/1‑150 (MQ=255) ggctCGTTCGCCATGGCGGGGGGGTTAGGGGTTTTTAAAACGAA‑TTGAATAATTTTA‑TCGTTCTCAT‑AACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGt < 2:2826883/147‑1 (MQ=255) tCGTTCGGCATTGACGGCGGGTTAGCAGGTTTTTCAACGAA‑TTCGATAATTTTA‑TCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGa > 2:2976263/1‑150 (MQ=255) ttCGGCATGGGGGGGGGGTTAGCATTTTTTAAAACAAA‑TTCAATATTTTTT‑TCTTTCTAACCACCCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCg < 2:1783398/150‑1 (MQ=255) gggCATGGGCGGGGGGTAAGCGGTTTTTCCAACAAA‑TTCATTATTTTTT‑TCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTTCTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGAt < 2:1613869/149‑1 (MQ=255) ggCATTGACGGCGGGTTAGCAGGTTTTTCAACGAA‑TTCGATAATTTTA‑TCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGATa > 1:3289188/1‑150 (MQ=255) gaatggACGGGGGGTTAGCAGTTTTTTCAAAAAA‑TTCAATATTTTTA‑TCTTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGATaa < 2:2044036/145‑1 (MQ=255) gCATTGGCGGGGGTTTGGGGGGTTTTAAACCGAT‑TCCGATAATTTTT‑CCGTTCTCAAAAGCCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGATaa < 1:4275138/150‑1 (MQ=255) gCATTGACGGCGGGTTAGCAGGTTTTTCAACGAA‑TTCGATAATTTTA‑TCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGATaa > 1:740084/1‑150 (MQ=255) aTTGACGGCGGGGTAGCAGGGTTTTTAACGAA‑TTCGATAATTTTT‑TCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGATAAGc > 2:3438977/1‑150 (MQ=255) tGACGGCGGGTTAGCAGGTTTTTCAACGAA‑TTCGATAATTTTA‑TCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGCGCAACGTGCGCCTTTTTCGACGTGATCGATAAGCAt > 1:700712/1‑150 (MQ=255) gACGGGGGTTTAGCGGTTTTTTCAACGAA‑TTCGATATTTTTA‑TCTTTCTAATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGATAAGCATa < 1:3665040/150‑1 (MQ=255) cggcggGTTAGCAGGGTTTTCAACGAA‑ATCGATAATTTTA‑TCGGTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGATAAGCATAcg > 1:4394353/1‑150 (MQ=255) gtattAGTAGTTTTTTCAAC‑AA‑TTTCATTTTTTTATTCTTTCCCATAAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGATAAGCATACGCGag < 2:1686639/147‑1 (MQ=255) ggttgaGCAGTTTTTACAACGAA‑TTAAATAATTTTT‑TCGTTCTCAACAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGATAAGCATACGCGag < 2:4030155/145‑1 (MQ=255) ggTTAGCAGTTTTTTCAAAGAT‑TCCGATATTTTTT‑TCGTTCTCATCACCCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGATAAGCATACGCGagt < 2:2060266/150‑1 (MQ=255) tAGCAGGTTTTTCAACGAA‑TTCGATAATTTTA‑TCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGATAAGCATACGCGagtagt > 1:2935496/1‑150 (MQ=255) tAGCAGGTTTTTCAACGAA‑TTCGATAATTTTA‑TCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGATAAGCATACGCGagtagt > 1:2514152/1‑150 (MQ=255) tAGCAGGTTTTTCAACGAA‑TTCGATAATTTTA‑TCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGATAAGCATACGCGagtagt > 1:1705661/1‑150 (MQ=255) aGCAGGTTTTTCAACGAA‑TTCGATAATTTTA‑TCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGATAAGCATACGCGAGTAGTc > 1:1493799/1‑150 (MQ=255) gCAGGTTTTTCAACGAA‑TTCGATAATTTTA‑TCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGATAAGCATACGCGAGTAGTct > 1:1352130/1‑150 (MQ=255) aGGTTTTTCAACGAA‑TTCGATAATTTTA‑TCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGATAAGCATACGCGAGTAGTcttg > 2:2710501/1‑150 (MQ=255) tttttttCAACGAA‑TTAGAAATTTTTT‑TCGTTTTAACAGACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGATAAGCATACGCGAGTAGTcttgc < 2:3004560/148‑1 (MQ=255) | ATCAAATCTTTGCCAAAGTCGTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGTTTTTCAACGAA‑TTCGATAATTTTA‑TCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGATAAGCATACGCGAGTAGTCTTGCT > AP012306/3020521‑3020818 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |