Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | AP012306 | 3,020,670 | 0 | T | G | 31.7% | 281.7 / 11.5 | 163 | K195N (AAA→AAC) | glgC | glucose‑1‑phosphate adenylyltransferase |
Reads supporting (aligned to +/- strand): ref base T (73/37); new base G (51/0); total (126/37) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.03e-07 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
Only 100 of 242 total aligned reads displayed.
ATCAAATCTTTGCCAAAGTCGTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGTTTTTCAA‑CGAATTCGATAATTTTATCGTTCTC‑ATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGATAAGCATACGCGAGTAGTCTTGCTT > AP012306/3020521‑3020819 | gatctaTCTTTGCCAAAGTCGTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGt < 1:4211328/145‑1 (MQ=255) tCAAATCTTTGCCAAAGTCGTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGtt < 1:839055/150‑1 (MQ=255) tCAAATCTTTGCCAAAGTCGTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGtt < 2:2791623/150‑1 (MQ=255) cAAATCTTTGCCAAAGTCGTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGGTAGCAGGgtt > 2:4189532/1‑150 (MQ=255) aaaTCTTTGCCAAAGTCGTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGtttt < 1:555254/150‑1 (MQ=255) aaaTCTTTGCCAAAGTCGTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGtttt < 1:3306336/150‑1 (MQ=255) aaaTCTTTGCCAAAGTCGTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGAAGCAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGCCGGCGGGGTGGCCGGgttt > 2:2605687/1‑150 (MQ=255) aaTCTTTGCCAAAGTCGTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGCTAGCAGGgtttt > 1:2775715/1‑150 (MQ=255) cTTTGCCAAAGTCGTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGGTTACAGGTTTTTTaa > 2:1604107/1‑150 (MQ=255) tttGCCAAAGTCGTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGTTTTTCAA‑c < 1:274330/150‑1 (MQ=255) tGCCAAAGTCGTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTTGCAGGgttttttacaa > 2:456947/1‑144 (MQ=255) gCCAAAGTCGTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGCTAGCCGGGTTTTTaaacaa > 2:61361/1‑146 (MQ=255) ccAAAGTCGTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGTTTTTCAA‑CGAAt < 1:1799385/150‑1 (MQ=255) ccAAAGTCGTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGTTTTTCAA‑CGAAt > 1:3742316/1‑150 (MQ=255) cAAAGTCGTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGTTTTTCAA‑CGAAtt > 1:3844674/1‑150 (MQ=255) aaaGTCGTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGTTTTTCAA‑CGAATTc < 2:1292948/150‑1 (MQ=255) aaaGTCGTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGTTTTTCAA‑CGAATTc < 1:2216353/150‑1 (MQ=255) aGTCGTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGTTTTTCAA‑CGAATTCGa > 1:768618/1‑150 (MQ=255) gTCGTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGGTTTTTAA‑CGAATTTGAt > 1:2529110/1‑150 (MQ=255) gTCGTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGGTAGCAGGATTTTTCA‑CGAATTTGAt > 2:1708009/1‑150 (MQ=255) gTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGTTTTTCAA‑CGAATTCGATAAt < 1:1730134/150‑1 (MQ=255) gTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGGTAGCAGGGTTTTCCA‑CGGAATTGATaaa > 1:2018205/1‑149 (MQ=255) gTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGGTAGCAGGGTTTTCAA‑CGAATTCGATAAt > 1:1264756/1‑150 (MQ=255) tGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGGTAGCAGGGTTTTCAA‑CGAATTCGATAAtt > 1:1109376/1‑150 (MQ=255) ggCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGGTTTTCAA‑CGAATTCGATAAttt > 2:846417/1‑150 (MQ=255) ggCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGGTAGCAGGTTTTTCAA‑CGAATTCGATAAttt > 1:3609622/1‑150 (MQ=255) ggAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGTTTTTCAA‑CGAATTCGATAATTTTATc > 1:3017379/1‑150 (MQ=255) aGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGTTTTTCAA‑CGAATTCGATAATTTTATCGt < 2:284001/150‑1 (MQ=255) gTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGTTTTTCAA‑CGAATTCGATAATTTTATCGtt < 2:3425471/150‑1 (MQ=255) gTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGAAGGTTTTTCAA‑CGAATTTGATAAATTTATCGtt > 1:1877234/1‑150 (MQ=255) ttCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGTTTTTCAA‑CGAATTCGATAAATTTATCGTtc > 1:1174185/1‑150 (MQ=255) tctcATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGTTTTTCAA‑CGAATTCGATAATTTTATCGTtct < 2:3299642/150‑1 (MQ=255) tctcATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGTTTTTCAA‑CGAATTCGATAATTTTATCGTtct < 2:3662311/150‑1 (MQ=255) tcATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGGTAGCAGGGTTTTTAA‑CGAATTTGATAATTTTATCGTTCtc‑a > 2:1534595/1‑150 (MQ=255) cATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGGTTTTCAA‑CGAATTCGATAATTTTATCGTTCtc‑at > 1:2401383/1‑150 (MQ=255) aTCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGTTTTTCAA‑CGAATTCGATAATTTTATCGTTCtc‑atc < 1:3233380/150‑1 (MQ=255) aTCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGTTTTTCAA‑CGAATTCGATAATTTTATCGTTCtc‑atc > 1:941531/1‑150 (MQ=255) aTCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGTTTTTCAA‑CGAATTCGATAATTTTATCGTTCtc‑atc < 1:2187243/150‑1 (MQ=255) aTCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGGTTTTCAA‑CGAATTCGATAATTTTATCGTTCtc‑att > 2:2720586/1‑149 (MQ=255) tCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGTTTTTCAA‑CGAATTCGATAATTTTATCGTTCtc‑atca < 1:1038230/150‑1 (MQ=255) gcgATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAAGGTTTTCAA‑CGAATTCGATAATTTTATCGGTCTC‑CTCAAc > 2:118386/1‑150 (MQ=255) gcgATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTAGGCATTGACGGCGGGTTAGCAGGTTTTTCAA‑CGAATTCGATAATTTTATCGTTCTC‑ATCAAc < 1:716529/150‑1 (MQ=255) cgATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGTTTTTCAA‑CGAATTCGATAATTTTATCGTTCTC‑ATCAAcc > 1:167094/1‑150 (MQ=255) gATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGTTTTTCAA‑CGAATTCGATAATTTTATCGTTCTC‑ATCAACCg < 1:2857624/150‑1 (MQ=255) gATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGGTAGCAGGTTTTTCAA‑CGAAATTGATAATTTTATCGTTCTC‑ATCAACCg > 2:959727/1‑150 (MQ=255) tCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGTTTTTCAA‑CGAATTCGATAATTTTATCGTTCTC‑ATCAACCGcc > 1:3189381/1‑150 (MQ=255) tcttctTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGTTTTTCAA‑CGAATTCGATAATTTTATCGTTCTC‑ATCAACCGCCaca > 2:2215977/1‑148 (MQ=255) tcttctTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGTTTTTCAA‑CGAATTCGATAATTTTATCGTTCTC‑ATCAACCGCCATa > 1:2314010/1‑150 (MQ=255) tcttcCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGGTTTTCAA‑CGAATTCGATAATTTTATCGTTCTC‑ATCAACCGCCCTAACg > 1:2111738/1‑150 (MQ=255) tcttcCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGGTAGCAGGGTTTTTAA‑CGAATTCGATAATTTTATCGTTCTC‑ATCAACCGCCATaaag > 2:2089981/1‑148 (MQ=255) ttcCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGTTTTTCAA‑CGAATTCGATAATTTTATCGTTCTC‑ATCAACCGCCATAACGcc > 1:633662/1‑150 (MQ=255) agcagTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGGTTTTCAA‑CGAATTCGATAATTTTTTCGTTCTC‑ATCAACCCCCATAACGCCAAAt > 2:966941/1‑150 (MQ=255) agcagTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGGTAGCAGGTTTTTTAA‑CGAATTCGATAATTTTTTCGTTCTC‑ATCAACCGCCATAACGCCAAAt > 2:2472866/1‑150 (MQ=255) agcagTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGGTAGCAGGTTTTTCAA‑CGAATTTGATAATTTTATCGTTTTC‑ATCAACCGCCATAACGCCAAAt > 2:3960932/1‑150 (MQ=255) agTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGTTTTTCAA‑CGAATTCGATAATTTTATCGTTCTC‑ATCAACCGCCATAACGCCAAATGCg > 1:3077601/1‑150 (MQ=255) tCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGTTTTTCAA‑CGAATTCGATAATTTTTTCGTTCTC‑ATCAACCGCCATAACGCCAAATGCgggg > 2:3796202/1‑148 (MQ=255) tCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGTTTTTCAA‑CGAATTCGATAATTTTATCGTTCTC‑ATCAACCGCCATAACGCCAAATGCgggg > 2:2693137/1‑148 (MQ=255) cATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGTTTTTCAA‑CGAATTCGATAATTTTATCGTTCTC‑ATCAACCGCCATAACGCCAAATGCGGAgg > 2:665060/1‑150 (MQ=255) tACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGTTTTTCAA‑CGAATTCGATAATTTTATCGTTCTC‑ATCAACCGCCCTAACGCCAAATACGGAGGca > 2:3106876/1‑149 (MQ=255) tACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGGTAGCAGGTTTTTCAA‑TGAATTCGATAATTTTATCGTTCTC‑ATCAACCGCCATAACGCCAAATGCGGAGGct > 1:3952190/1‑150 (MQ=255) aTAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGTTTTTCAA‑CGAATTCGATAATTTTATCGTTCTC‑ATCAACCGCCATAACGCCAAATGCGGAGGCttcttc > 1:2664991/1‑150 (MQ=255) aTAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGTTTTTCAA‑CGAAATCGATAATTTTTTCGTTCTC‑ATCAACCGCCATAACGCCAAATGCCGAGGGttcttc > 2:1932568/1‑150 (MQ=255) aTAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGGTTTTTAA‑CGAATTCGATAATTTTATCGTTCTC‑ATCAACCGCCATAACGCCAAATGCGGAGGCttcttc > 2:874531/1‑150 (MQ=255) aTAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGGTTTTCAA‑CGAATTCGATAATTTTATCGTTCTC‑ATCAACCGCCATAACGCCAAATGCGGAGGCttcttc > 1:2138534/1‑150 (MQ=255) aGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGTTTTTCAA‑CGAATTCGATAATTTTATCGTTCTC‑ATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCaa > 1:1415588/1‑150 (MQ=255) aGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGGTTTTCAA‑CCAATTCGATAATTTTTTCTGTCTC‑ATCAACCGCCATAAAGACAAATGCGGGGGCCTCCTCaa > 2:2666053/1‑150 (MQ=255) tCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGGTTTTCAA‑CGAATTCGATAATTTTATCGTTCTC‑ATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACt > 1:1787199/1‑150 (MQ=255) gACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGTTTTTTAA‑CGAATTCGATAATTTTATCGTTCTC‑ATCAACCGCCATAACGCCAAAAGCGGAGGCTTCTTCAATCGGTACTGGCAt > 2:3600604/1‑150 (MQ=255) atAGATACCCATCCCCGCCAGAGTTTTGCGCGGTTCTTTCGGCATTGACGGGGGGTTAGGAGTTTTTCCAA‑CAATTTCGATATTTTTTTCTTTCTC‑ATAACCCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACa < 2:3766448/149‑1 (MQ=255) aTACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGGTAGCAGGTTTTTCAA‑CGAATTCGATAATTTTATCGTTCTC‑ATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCa > 2:596976/1‑150 (MQ=255) ccATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGGTAGCAGGGTTTTCAA‑CGAATTCGATAATTTTATCGTTCTC‑ATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACgg > 2:2203308/1‑150 (MQ=255) cTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGGTAGCAGGGTTTTCAA‑CGAATTCGATAATTTTATCGTTCTC‑ATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCaa > 2:3174335/1‑150 (MQ=255) gCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGGTTTTCAA‑CGAAATTGATAATTTTTTTGTTCTC‑CTCAACCCCCATAAAGCCAAAAGCGGAGGCTTCTTCAATTGGGACTGGCATACAAACAACGGGGCAACGt > 2:2017523/1‑150 (MQ=255) ccAGAGTTTTGCTGGGATCTTTCGGCATTGGGGGGGGGTTAGGAGTTTTTCAAA‑CGAATTCGATATTTTTTTCTTTCTC‑ATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTg < 2:3699979/150‑1 (MQ=255) agagATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGGTTTTTAA‑CGAATTTGATAATTTTTTCGTTCTC‑ATCAACCGCCCTAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAACAACGGTGCAACGTgcg > 2:3026835/1‑150 (MQ=255) gCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGTTTTTCAA‑CGAATTCGATAATTTTATCGTTCTC‑ATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTc > 1:1579932/1‑150 (MQ=255) ggATCGTTCGGCATTGACGGCGGGTTAGCAGGTTTTTCAA‑CGAATTCGATAATTTTATCGTTCTC‑ATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAAAGGTGCAACGTGCGCCTTTTTCGACg > 1:303370/1‑150 (MQ=255) ggATCGTTCGGCATTGACGGCGGGTTAGCAGGGTTTTCAA‑AGAATTCGATAATTTTATCGTTCTC‑ATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGGGCAACGTGCGCCCTTTTCGACg > 2:1558393/1‑150 (MQ=255) cGTTCGGTATGGGGGGGGGGTTAGCAGTTTTTTCAA‑CAAATTAGATATTTTTATCTTTCTC‑ATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGAt < 2:2508352/150‑1 (MQ=255) cGTTCGGCATTGACGGCGGGTTAGCAGGGTTTTCAA‑CGAATTCGATAATTTTTTCGTTCTC‑ATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGAt > 2:215407/1‑150 (MQ=255) cGGCATTGACGGCGGGTTAGCAGGTTTTTCAA‑CGAATTCGATAATTTTATCGTTCTC‑ATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGAt > 1:367073/1‑150 (MQ=255) ggCATTGACGGCGGGTTAGCAGGTTTTTCAA‑CGAATTCGATAATTTTTTCGTTTTC‑ATCAACCGCCATAACGCCAAATGCGGGGGCTTCTTCAATCGGTATTGGCATACAAACAACGGTGCAACGTGCGCCTTTTTTGACGTGATCGATa > 2:1863621/1‑150 (MQ=255) ggCATTGACGGCGGGTTAGCAGGTTTTTCAA‑CGAATTCGATAATTTTATCGTTCTC‑ATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGATa > 1:3502314/1‑150 (MQ=255) ggggggggggTTAGCTGTTTTTCAAA‑CAAATTCGATATTTTTATCTTTCTC‑ACCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGATAAGCAt < 2:2263634/143‑1 (MQ=255) gACGGCGGGTTAACAGGGTTTTCAA‑CAAATTCGATAATTTTTTCGTTCTC‑ATCAACCGCCCTAACACCCAATGCGGAGGCTTCTTCTATCGGTACTGGCATACAAGCAACGGTGCCACGTGGGCCTTTTTCGACGTGATCGTTAAGCaaa > 2:3080610/1‑148 (MQ=255) ggggggggTTAGCAGTTTTTACAA‑CAAATTCGATATTTTTTTCTTTCTC‑ATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGATAAGCATAc < 2:1103692/145‑1 (MQ=255) cgggggggTTAGTA‑GTTTTTCAACCAAATTAATTATTTTTTTCTTTCCA‑ACCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGATAAGCATAc < 2:384065/145‑1 (MQ=255) ggggggtttAGCTGTTTTTTAAA‑CAATTTTAATATTTTTTCCTTTCTC‑ACCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGATAAGCATAcg < 2:3818694/143‑1 (MQ=255) ggcggGTTAGCAGGTTTTTCAA‑CGAATTCGATAATTTTATCGTTCTC‑ATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGATAAGCATAcgc > 1:3397669/1‑150 (MQ=255) gggggTTTGCTGGTTTTCCAC‑CAAATTGAATATTTTTATCGTTCCC‑ATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGATAAGCATAcgcg < 1:729473/148‑1 (MQ=255) gggggTTAGCATTTTTTTCAA‑AAAATTAAATATTTTTTTCGTTCTC‑ACCACCCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGATAAGCATAcgcg < 2:2767180/148‑1 (MQ=255) ggggTTAGCATTTTTTACAA‑AAAATTCGATAATTTTATATTCCTA‑ACCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGATAAGCATACGCGa < 1:87153/149‑1 (MQ=255) gtgTTAGCA‑GTTTTTCAA‑AGGATTAAAATATTTTTTCCTTCCCAAACAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGATAAGCATACGCGag < 2:2645277/148‑1 (MQ=255) gggTTAGCAGGTTTTTCAA‑CGAATTCGATAATTTTATCGTTCTC‑ATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGATAAGCATACGCGag > 1:2081441/1‑150 (MQ=255) ttAGCAGGATTTTCAA‑CGAATTCTATAATTTTATCGTTCTC‑ATCAACCCCCATAACGCCAAATGCGAAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTTATCGATAAGCATACGCGagtag > 2:499277/1‑150 (MQ=255) tcaGCAGGTTTTTCAA‑CAAATTCAATAATTTTACCTTTCTC‑ATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGATAAGCATACGCGagtag < 1:472926/148‑1 (MQ=255) gCAGGTTTTTCAA‑CGAATTCGATAATTTTATCGTTCTC‑ATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGATAAGCATACGCGAGTAGTct > 1:4072638/1‑150 (MQ=255) cAGGTTTTCAAA‑CGATTAAAATAATTTTATCTTCCTA‑ATCAGCCGCCATAACGCCAAATGCGGAGGCTTCTTCAACCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGATAAGCATACGCGAGTAGTctt < 1:4025814/150‑1 (MQ=255) tttttCAA‑CGAATTCGATAATTTTATCGTTCTC‑ATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGATAAGCATACGCGAGTAGTcttgctt > 2:3370458/1‑150 (MQ=255) ttttcCAA‑CAAATTCGATATTTTTCTCGTTCTC‑ACAACCCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGATAAGCATACGCGAGTAGTcttgctt < 2:4087715/150‑1 (MQ=255) | ATCAAATCTTTGCCAAAGTCGTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAGGTTTTTCAA‑CGAATTCGATAATTTTATCGTTCTC‑ATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGATAAGCATACGCGAGTAGTCTTGCTT > AP012306/3020521‑3020819 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |