| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AP012306 | 3,903,791 | 0 | A | G | 22.3% | 653.0 / 57.5 | 256 | E189G (GAA→GGA) | yjgJ | predicted transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base A (16/183); new base G (57/0); total (73/183) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.82e-43 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 350 total aligned reads displayed.
GACCATTTATGACTACATCGCCAGGCGGCATCCACAACGCGCACAATGTGTGACTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGC‑GGGCCTTGACCCGAAA‑GGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAACGTT > AP012306/3903642‑3903940 | aTTTATGACTACATCGCCAGGCGGCATCCACAACGCGCACAATGTGTGACTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAggg > 2:413472/1‑148 (MQ=255) aTTTATGACTACATCGCCAGGCGGCATCCACAACGCGCACAATGTGTGACTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCg < 2:252653/150‑1 (MQ=255) ttATGACTACATCGCCAGGCGGCATCCACAACGCGCACAATGTGTGACTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGAt < 1:930074/150‑1 (MQ=255) ttATGACTACATCGCCAGGCGGCATCCACAACGCGCACAATGTGTGACTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGAt > 1:3261977/1‑150 (MQ=255) tATGACTACATCGCCAGGCGGCATCCACAACGCGCACAATGTGTGACTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGATa > 1:513541/1‑150 (MQ=255) tATGACTACATCGCCAGGCGGCATCCACAACGCGCACAATGTGTGACTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATa < 1:3083281/150‑1 (MQ=255) aTGACTACATCGCCAGGCGGCATCCACAACGCGCACAATGTGTGACTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGCTaa > 1:4015488/1‑150 (MQ=255) tGACTACATCGCCAGGCGGCATCCACAACGCGCACAATGTGTGACTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATaaa < 1:2493974/150‑1 (MQ=255) aCTACATCGCCAGGCGGCATCCACAACGCGCACAATGTGTGACTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATaaaaa > 1:1058500/1‑150 (MQ=255) aCTACATCGCCAGGCGGCATCCACAACGCGCACAATGTGTGACTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATaaaaa < 2:116629/150‑1 (MQ=255) aCTACATCGCCAGGCGGCATCCACAACGCGCACAATGTGTGACTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATaaaaa < 1:1369553/150‑1 (MQ=255) cTACATCGCCAGGCGGCATCCACAACGCGCACAATGTGTGACTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAAc < 1:3762087/150‑1 (MQ=255) tACATCGCCAGGCGGCATCCACAACGCGCACAATGTGTGACTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGGGATaaaaaat > 2:1532807/1‑148 (MQ=255) aCATCGCCAGGCGGCATCCACAACGCGCACAATGTGTGACTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGATAAAAACTa > 1:4195763/1‑150 (MQ=255) cATCGCCAGGCGGCATCCACAACGCGCACAATGTGTGACTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGATAAAAACTAt > 1:1706386/1‑150 (MQ=255) cATCGCCAGGCGGCATCCACAACGCGCACAATGTGTGACTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTAt < 2:3849069/150‑1 (MQ=255) aTCGCCAGGCGGCATCCACAACGCGCACAATGTGTGACTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGATAAAAAATAtt > 2:456129/1‑150 (MQ=255) aTCGCCAGGCGGCATCCACAACGCGCACAATGTGTGACTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGGTAAAAAATAtt > 1:2273160/1‑150 (MQ=255) cGCCAGGCGGCATCCACAACGCGCACAATGTGTGACTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCt < 1:1471224/150‑1 (MQ=255) gCCAGGCGGCATCCACAACGCGCACAATGTGTGACTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCtt < 2:4169378/150‑1 (MQ=255) ccAGGCGGCATCCACAACGCGCACAATGTGTGACTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGGTAAAAACTATTTTTg > 1:1855025/1‑150 (MQ=255) ccAGGCGGCATCCACAACGCGCACAATGTGTGACTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTg < 1:1796289/150‑1 (MQ=255) aGGCGGCATCCACAACGCGCACAATGTGTGACTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGATAAAAACTATTCTTgag > 1:3490730/1‑150 (MQ=255) ggcggcATCCACAACGCGCACAATGTGTGACTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGGGGTAAAAAAAATTCTTtagg > 2:3493865/1‑150 (MQ=255) aTCCACAACGCGCACAATGTGTGACTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGATAAAAAATATTCTTTAGGAGGGAt > 1:4112148/1‑150 (MQ=255) cacaACGCGCACAATGTGTGACTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGATAAAAAATATTCTTTAGGAGGGATGC‑g > 2:3785686/1‑150 (MQ=255) cacaACGCGCACAATGTGTGACTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGATAAAAAATAATCTTTTGGAGGGATggg > 2:3062816/1‑148 (MQ=255) acaACGCGCACAATGTGTGACTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGGGATAAAAACTATTTTTTAGGAGTggagggg > 2:1487653/1‑144 (MQ=255) caACGCGCACAATGTGTGACTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGC‑ggg < 1:872189/150‑1 (MQ=255) gcgcACAATGTGTGACTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGC‑GGGCCtt < 1:1246235/150‑1 (MQ=255) cgcACAATGTGTGACTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGC‑GGGCCTTg < 2:2943492/150‑1 (MQ=255) cgcACAATGTGTGACTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGC‑GGGCCTTg < 1:1531307/150‑1 (MQ=255) cacaATGTGTGACTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGC‑GGGCCTTGAc < 1:3031627/150‑1 (MQ=255) cacaATGTGTGACTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGGGATGC‑GGGCCTTGAc > 1:414901/1‑150 (MQ=255) aTGTGTGACTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGC‑GGGCCTTGACCCGa < 1:1349943/150‑1 (MQ=255) tgtgACTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGC‑GGGCCTTGACCCGAAA‑g < 1:1148179/150‑1 (MQ=255) gtgACTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGGGGAAAAAACTAATTTTGAGGGGGGATGG‑GGGGCTTGACCCCAAA‑gg > 2:3640700/1‑150 (MQ=255) aCTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGGGCGGTAAAAAATATTCTTGAGGAGGGATGC‑GGGGCTTGTCCCGAAA‑Ggggg > 2:2807822/1‑150 (MQ=255) aCTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGATAAAAAATATTTTTTAGGGGGGATGC‑GGGGCCTGACCCGAAA‑AGCgg > 2:3344074/1‑150 (MQ=255) gATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGATAAAAAATATTCTTTTGGAGTGATGC‑GGGGCTTGACCCGGAA‑GGCggggg > 2:142893/1‑148 (MQ=255) aTTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGATAAAAAATATTCTTTAGGAGGGATGC‑GGGGCTTGACCCGCAA‑GGCGGGgaa > 2:1270239/1‑150 (MQ=255) aTTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGAACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGATAAAAAATATTTTTTAGGAGGGATGC‑GGGGCTTTACCCGCAA‑GGGGGGgaa > 2:1996263/1‑150 (MQ=255) ttttATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGGTAAAAACTATTTTTTTGGAGGGATGC‑GGGCCTTGACCCGAAA‑GGCGGGaaaa > 2:2146859/1‑149 (MQ=255) ttttATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGC‑GGGCCTTGACCCGAAA‑GGCGGGAAAg < 1:1084352/150‑1 (MQ=255) ttttATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGC‑GGGCCTTGACCCGAAA‑GGCGGGAAAg < 1:837394/150‑1 (MQ=255) ttATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGATAAAAACTATTCTTTAGGAGTGATGC‑GGGCCTTGACCCGAAA‑AGCGGGGAAgcg > 1:3930907/1‑150 (MQ=255) ttATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGATAAAAAATATTCTTGAGGAGTGATGC‑GGGCCTTGACCCGAAA‑GGCGGGGAAacg > 1:3666348/1‑150 (MQ=255) ttATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGC‑GGGCCTTGACCCGAAA‑GGCGGGAAAgcg < 2:1895601/150‑1 (MQ=255) aTGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGC‑GGGCCTTGACCCGAAA‑GGCGGGAAAGCGcc < 2:3383905/150‑1 (MQ=255) tGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGGGATAAAAAATATTCTTGAGGAGGGATGC‑GGGCCTTGACCCGAAA‑GGCGGGGAAACGCCt > 2:2625463/1‑150 (MQ=255) gAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGC‑GGGCCTTGACCCGAAA‑GGCGGGAAAGCGCCTg < 2:3218313/150‑1 (MQ=255) gTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGC‑GGGCCTTGACCCGAAA‑GGCGGGAAAGCGCCTGcc < 2:848140/150‑1 (MQ=255) aTGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGC‑GGGCCTTGACCCGAAA‑GGCGGGAAAGCGCCTGCCGATAAGtt < 1:3608309/150‑1 (MQ=255) gggCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGC‑GGGCCTTGACCCGAAA‑GGCGGGAAAGCGCCTGCCGATAAGTTGTGATa < 1:3831292/150‑1 (MQ=255) gCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGATAAAAAATATTTTTTAGGAGTGATGC‑GGGCCTTGACCCGAAA‑GGCGGGGAAACGCCTGCCGATAAATTGTGGTaaa > 2:2718300/1‑149 (MQ=255) ttttCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGC‑GGGCCTTGACCCGAAA‑GGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGa < 2:3551031/149‑1 (MQ=255) cTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGGTAAAAAATATTCTTTAGGAGGGATGC‑GGGGCTTGACCCGAAA‑GGCGGGGAAACGCCCGCCGGTAAATTTTGGTAAGACaaa > 2:3993770/1‑149 (MQ=255) cTGCGAAGGAAGGAGAGGGGCACTTTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGC‑GGGCTTTGACCCGAAA‑GGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACaat < 2:3277286/150‑1 (MQ=255) tGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGC‑GGGCCTTGACCCGAAA‑GGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACaata < 1:2387607/150‑1 (MQ=255) cGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGATAAAAAATATTTTTTGGGGGTGGTGC‑GGGCCTTGACCCGAAA‑GGCGGGGAAAGGCCCGCCGATAAATTGTGGTAAGACaaaaaa > 2:705513/1‑149 (MQ=255) cGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGC‑GGGCCTTGACCCGAAA‑GGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACaataat < 2:2423466/150‑1 (MQ=255) cGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGC‑GGGCCTTGACCCGAAA‑GGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACaataat < 1:796934/150‑1 (MQ=255) aaGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGC‑GGGCCTTGACCCGAAA‑GGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTc < 1:2621348/150‑1 (MQ=255) gCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGGGGGATAAAAACAATTCTTGAGGAGTGATGC‑GGGCCTTTACCCGAAAGGGGGGGAAAGCCCCGGCGGCAAATTTG‑GATAAAACAAAAAATTAcg > 2:2681116/1‑150 (MQ=255) ggggCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGC‑GGGCCTTGACCCGAAA‑GGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAgg < 1:1313513/150‑1 (MQ=255) ggCACTCTATAGAACAACTCTGTGCAACAGCTGCAAGGGCGGGGGAAGCGAAAAAACCTTTTCTTGAGGAGTGATGC‑GGGCCTTGCCCCGAAA‑GGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCt < 2:287268/150‑1 (MQ=255) gCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGATAAAAAATATTCTTTAGGAGGGGTGC‑GGGGCTTGACCCGAAA‑AGCGGGGAAACGCCCGCCGGTAAATTGTGGTAAAAAAAAAATTTACGCGGTAAGGGTa > 2:640481/1‑150 (MQ=255) gCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGC‑GGGCCTTGACCCGAAA‑GGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTa < 1:1995301/150‑1 (MQ=255) ctctATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGC‑GGGCCTTGACCCGAAA‑GGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCg < 1:720570/150‑1 (MQ=255) tctATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGATAAAAAAAATTTTTGAGGAGGGATGC‑GGGCCCTGACCCGAAA‑GGGGGGGAAAAGCCTGCCGGTAAGGTGTGATAAGACAAAAAATTACGCGGTAAGGCTAGCgg > 2:2455471/1‑150 (MQ=255) ctATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGATAAAAAATATTTTTGAGGAGGGATGC‑GGGGCTTGACCCGAAA‑GGCGGGGAAACGCCCGCCGGTAAGTTGTGGTAAAACAAAAAATCACGCGTTAAAGCTAGCGGa > 2:1596506/1‑150 (MQ=255) aGAACAACTCTGTGCAACAGCTGCAATGGCGGGGAAAGCGATAAAAACTATTCTTGAGGAGTGATGC‑GGGCTTTGACCCGAAA‑GGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTg < 2:1815553/150‑1 (MQ=255) aacaacTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGATAAAAAATATTTTTTAGGAGTGATGC‑GGGCCTTGACCCGAAA‑GGCGGGGAAACGCCCGCCGATAAGGTGTGATAAAACAATAAATCACGCGTTAAGGCTAGCGGAATTGAt > 2:2547059/1‑150 (MQ=255) aacaacTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGC‑GGGCCTTGACCCGAAA‑GGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGAt < 2:3816402/150‑1 (MQ=255) acaacTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGC‑GGGCCTTGACCCGAAA‑GGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGAtt < 1:1444636/150‑1 (MQ=255) aacTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGATAAAAAATATTTTTTAGGGGGGATTC‑GGGCCTTGGCCCGAAA‑GGCGGGGAAAAGCCTGCCGATAAGTTGTGGTAAAACAAAAAATTACCCGCTAAGGCGAGGGGAATTGGtttt > 2:2487361/1‑148 (MQ=255) acTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGC‑GGGCCTTGACCCGAAA‑GGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATc < 1:230643/150‑1 (MQ=255) tctGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGC‑GGGCCTTGACCCGAAA‑GGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCtt < 1:1600290/150‑1 (MQ=255) tctGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGGGATGC‑GGGCTTTGACCCGAAA‑GGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCtt < 1:421232/150‑1 (MQ=255) ctGTGAAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGC‑GGGCCTTGACCCGAAA‑GGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCttt < 2:1641749/150‑1 (MQ=255) tgtgCAACAGCTGCAATGGCGGGGGGAGCGATAAAAAATATTTTTTAGGGGGGATGC‑GGGGCTTGACCCGAAA‑AGCGGGGAAACGCCCGCCGGGAAAAAGGGGTAAAAAAAAAAATTACCCGTTTAAGGTAGCGGGAATTATTATCtttt > 2:3107892/1‑150 (MQ=255) tgtgCAACAGCTGCAATGGCGGGGGGAGCGATAAAAAATATTTTTGGGGGGGGATGC‑GGGCCTTGACCCGAAA‑AGGGGGGAAGCGCCTGCCGGTAAGGTGGGGTAAAAAAAAAAATTACCCGGTAAAGCTAGCGGAAATTTTTAtttttt > 2:1709007/1‑150 (MQ=255) aCAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGC‑GGGCTTTGACCCGAAA‑GGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGtata < 2:1352610/150‑1 (MQ=255) cAGCTGCAATGGGGGGGGAAGCGATAAAAACTATTCTTGAGGAGGGATGC‑GGGCCTTGACCCGAAA‑GGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATaa < 2:2105846/150‑1 (MQ=255) cAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGC‑GGGCCTTGACCCGAAG‑GGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATaa < 1:915883/150‑1 (MQ=255) cAGCTGAAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGC‑GGGCCTTGACCCGAAA‑GGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATaa < 2:1765176/150‑1 (MQ=255) aGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGC‑GGGCCTTGACCCGAAA‑GGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAAc < 1:459751/150‑1 (MQ=255) gCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGC‑GGGCCTTGACCCGAAA‑GGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACg < 2:2321808/150‑1 (MQ=255) gCAATGGCGGGGGGAGGGATAAAAAATATTTTTTGGGGGGGATTCGGGGCCTTG‑CCCGAAA‑AGCGGGGAAACGCCTGCCGATAAGTTGTGATAAGAAAAAAAATAACGCGGTAAAGGTAAGGGAATTTATTTTTTTTTTGTTTAAAGATa > 2:3026968/1‑150 (MQ=255) gCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGC‑GGGCCTTGACCCGAAA‑GGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATa < 1:292617/150‑1 (MQ=255) attGGCGGGGAAAGCGATAAAAACTATTCTTGAGGAGTGATGC‑GGGCCTTGACCGGAAA‑GGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGa < 1:3141510/148‑1 (MQ=255) tGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGC‑GGGCCTTGACCCGAAA‑GGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAAGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGaaa > 2:1217549/1‑150 (MQ=255) tGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGC‑GGGCCTGGACCCGAAA‑GGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGaaa < 2:512987/150‑1 (MQ=255) ggCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGC‑GGGCCTTGACCCGAAA‑GGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAAt < 1:2661061/150‑1 (MQ=255) ggCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGC‑GGGCCTTGACCCGAAA‑GGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAAt > 1:2063975/1‑150 (MQ=255) ggCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGC‑GGGCCTTCACCCAAAA‑GGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAAt < 2:2281244/150‑1 (MQ=255) gggggAAGCGATAAAAACTATTCTTGAGGAGTGATGC‑GGTCCTTGACCCGAAA‑GGCGGGCAAGCGCCTGCCGATAAGTTGGGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGTTAGAAATgca > 2:403803/1‑148 (MQ=255) ggggAAGCGATAAAAACTATTCTTGAGGAGTGATGG‑GGGCTTTGACCCGAAA‑GGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGaaa < 2:787143/150‑1 (MQ=255) ggggAAGCGATAAAAACTATTCTTGAGGAGTGATGC‑GGGCCTTGACCCGAAA‑GGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGaaa < 1:2857240/150‑1 (MQ=255) gggAAGCGATAAAAACTATTCTTGAGGAGTGATGC‑GGGCTTTGACCCGAAA‑GGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAAc < 1:3421208/150‑1 (MQ=255) | GACCATTTATGACTACATCGCCAGGCGGCATCCACAACGCGCACAATGTGTGACTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGC‑GGGCCTTGACCCGAAA‑GGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAACGTT > AP012306/3903642‑3903940 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |