| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP012306 | 1856463 = | 213 (0.720) | 5 (0.020) | 5/274 | 22.8 | 2.5% | coding (1685/1761 nt) | yejH | predicted ATP‑dependet helicase |
| ? | AP012306 | 1856475 = | 200 (0.740) | coding (1697/1761 nt) | yejH | predicted ATP‑dependet helicase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CAACAGGTAAGTGATCTGCTTTGCGTATGCAAAAGCGGGCGAGATTCTATACTCAATCGCCTTATACATCAATCAAAACTACCATTAACCGCGTAATTCGTGCGCCAGACGAAAACGACCTTCGTAATCGAACACTTTTTCACGCACCTGCCAGTACTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP012306/1856623‑1856463‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccagtactggcAGGTGCGTGAAAAAGTGTTCGATTACGAAGGTCGTTTTCGTCTGGCGCACGAATTACGCGGTTAATGGTAGTTTTGATTGATGTATAAGGCGATTGAGTATAGAATCTCGCCCGCTTTTGCATACGCAAAGCAGATCACTTACCTGTT > AP012306/1856475‑1856622 CAACAGGTAAGTGATCTGCTTTGCGTATGCAAAAGCGGGCGAGATTCTATACTCAATCGCCTTATACATCAATCAAAACTACCATTAACCGCGTAATTCGTGCGCCAGACGAAAACGACCTTCGTAATCGAACACTTTTTCACGCACCTG > 1:1258246/1‑150 AACAGGTAAGTGATCTGCTTTGCGTATGCAAAAGCGGGCGAGATTCTATACTCAATCGCCTTATACATCAATCAAAACTACCATTAACCGCGTAATTCGTGCGCCAGACGAAAACGACCTTCGTAATCGAACACTTTTTCACGCACCTGC > 2:1522937/1‑150 ACAGGTAAGTGATCTGCTTTGCGTATGCAAAAGCGGGCGAGATTCTATACTCAATCGCCTTATACATCAATCAAAACTACCATTAACCGCGTAATTCGTGCGCCAGACGAAAACGACCTTCGTAATCGAACACTTTTTCACGCACCTGCC > 2:397417/1‑150 AGGTAAGTGATCTGCTTTGCGTATGCAAAAGCGGGCGAGATTCTATACTCAATCGCCTTATACATCAATCAAAACTACCATTAACCGCGTAATTCGTGCGCCAGACGAAAACGACCTTCGTAATCGAACACTTTTTCACGCACCTGCCAG > 1:2311631/1‑150 AGGTAAGTGATCTGCTTTGCGTATGCAAAAGCGGGCGAGATTCTATACTCAATCGCCTTATACATCAATCAAAACTACCATTAACCGCGTAATTCGTGCGCCAGACGAAAACGACCTTCGTAATCGAACACTTTTTCACGCACCTGCCAG > 2:835363/1‑150 GTAAGTGATCTGCTTTGCGTATGCAAAAGCGGGCGAGATTCTATACTCAATCGCCTTATACATCAATCAAAACTACCATTAACCGCGTAATTCGTGCGCCAGACGAAAACGACCTTCGTAATCGAACACTTTTTCACGCACCTGCCAGTA > 1:2229750/1‑150 TAAGTGATCTGCTTTGCGTATGCAAAAGCGGGCGAGATTCTATACTCAATCGCCTTATACATCAATCAAAACTACCATTAACCGCGTAATTCGTGCGCCAGACGAAAACGACCTTCGTAATCGAACACTTTTTCACGCACCTGCCAGTAC > 2:2850225/1‑150 GATTCTATACTCAATCGCCTTATACATCAATCAAAACTACCATTAACCGCGTAATTCGTGCGCCAGACGAAAACGACCTTCGTAATCGAACACTTTTTCACGCACCTGCCAGTACTGGCAGGTGCGTGAAAAAGTGTTCGATTACGAAGG > 1:3023514/1‑150 ACTCAATCGCCTTATACATCAATCAAAACTACCATTAACCGCGTAATTCGTGCGCCAGACGAAAACGACCTTCGTAATCGAACACTTTTTCACGCACCTGCCAGTACTGGCAGGTGCGTGAAAAAGTGTTCGATTACGAAGGTCGTTTTC < 2:3023514/150‑1 CATCAATCAAAACTACCATTAACCGCGTAATTCGTGCGCCAGACGAAAACGACCTTCGTAATCGAACACTTTTTCACGCACCTGCCAGTACTGGCAGGTGCGTGGAAAAGTGTTCGATTACGAAGGTCGTTTTCGTCTGGCGCACGAATT > 2:100661/1‑150 ATTAACTGCGTAATTCGTGCGCCAGACGAAAACGACCTTCGTAATCGAACACTTTTTCACGCACCTGCCAGTACTGGCAGGTGCGTGAAAAAGGGTTCGATTACGAAGGTCGTTTTCGTCTGGCGCACGAATTACGCGGTTAATGGTAGT > 2:587186/1‑150 tacCCGCGTATTTCGTGCGCCAGACGAAAACGCCCTTCGTAATCGAACACTTTTTCACGCCCCTGCCAGTACTGGCAGGTGCGTGAAAAAGTGTTCGATTACGAAGGTCGTTTTCGTCTGGCGCACGAATTACGCGGTTAATGGTAGTTT < 2:382153/147‑1 CAGTACTGGCAGGTGCGTGAAAAAGTGTTCGATTACGAAGGTCGTTTTCGTCTGGCGCACGAATTACGCGGTTAATGGTAGGTTTGATTGATGTATAAGGCGATTGAGTATAGAATCTCGCCCGCTTTTGCATACGCAAAGCAGATCACT < 2:2552023/150‑1 CAGTACTGGCAGGGGCGTGAAAAAGTGTTCGATTACGAAGGGCGTTTTCGTCTGGCGCACGAATTACGCGGTTAATGGTAGTTTTGATTGATGTATAAGGCGATTGAGTATAGAATCTCGCCCGCTTTTGCATACGCAAAGCAGATCACT > 2:2917885/1‑150 AGTACTGGCAGGTGCGTGAAAAAGTGTTCGATTACGAAGGTCGTTTTCGTCTGGCGCACGAATTACGCGGTTAATGGTAGTTTTGATTGATGTATAAGGCGATTGAGTATAGAATCTCGCCCGCTTTTGCATACGCAAAGCAGATCACTT < 2:626693/150‑1 AGTACTGGCAGGTGCGTGAAAAAGTGTTCGATTACGAAGGGCGTTTTCGTCTGGCGCACGAATTACGCGGTTAATGGTAGTTTTGATTGATGTATAAGGCGATTGAGTATAGAATCTCGCCCGCTTTTGCATACGCAAAGCAGATCACTT > 1:2506519/1‑150 AGTACTGGCAGGGGCGTGAAAAAGTGTTCGATTACGAAGGTCGTTTTCGTCTGGCGCACGAATTACGCGGTTAATGGTAGTTTTGATTGATGTATAAGGCGATTGAGTATAGAATCTCGCCCGCTTTTGCATACGCAAAGCAGATCACTT > 2:1531288/1‑150 TGGCGGGTGCGTAAAAAAGTGTTCGATTACGAGGGTCGTTTTCGTCTGGCGCACAAATTCCGCGGTTAATGGTAGTTTTGATTGATGTATAGGGCGATTGAGTATAGAATCTCGCCCGCTTTTGCATACGCAAAGCAGATCACTTACCTG < 2:3891454/150‑1 TGGCAGGTGCGTGAAAAAGTGTTCGATTACGAAGGTCGTTTTCGTCTGGCGCACGAATTACGCGGTTAATGGTAGTTTTGATTGATGTATAAGGCGATTGAGTATAGAATCTCGCCCGCTTTTGCATACGCAAAGCAGATCACTTACCTG > 2:1536109/1‑150 GCAGGTGCGTGAAAAAGTGTTCGATTACGAAGGTCGTTTTCGTCTGGCGCACGAATTACGCGGTTAATGGTAGTTTTGATTGATGTATAAGGCGATTGAGTATAGAATCTCGCCCGCTTTTGCATACGCAAAGCAGATCACTTACCTGTT < 1:2622776/150‑1 GCAGGTGCGTGAAAAAGTGTTCGATTACGAAGGTCGTGTTCGTTTGGCGCACGAATTACGCGGTTAATGGTAGTTTTGATTGATGTATAAGGCGATTGAGTATAGAATCTCGCCCGCTTTTGCATACGCAAAGCAGATCACTTACCTGTT < 2:2231110/150‑1 CAACAGGTAAGTGATCTGCTTTGCGTATGCAAAAGCGGGCGAGATTCTATACTCAATCGCCTTATACATCAATCAAAACTACCATTAACCGCGTAATTCGTGCGCCAGACGAAAACGACCTTCGTAATCGAACACTTTTTCACGCACCTGCCAGTACTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP012306/1856623‑1856463‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccagtactggcAGGTGCGTGAAAAAGTGTTCGATTACGAAGGTCGTTTTCGTCTGGCGCACGAATTACGCGGTTAATGGTAGTTTTGATTGATGTATAAGGCGATTGAGTATAGAATCTCGCCCGCTTTTGCATACGCAAAGCAGATCACTTACCTGTT > AP012306/1856475‑1856622 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |