Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | AP012306 | 1,128,412 | 0 | T | G | 22.9% | 802.5 / 37.0 | 306 | V29G (GTG→GGG) | yciO | conserved protein |
Reads supporting (aligned to +/- strand): ref base T (42/194); new base G (70/0); total (112/194) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 7.39e-40 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
Only 100 of 355 total aligned reads displayed.
CCGCAGGCGTTGAAGGCGTCTGGCAGCTATGGGAACAGCCGCAGAACACCACAGAGAGGGAATTATGAGCCAGTTTTTTTATATTCATCCTGATAACCCACAGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGTGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAATTGAAGATAAAAACGCGATGGAGCGTATTTGTCGTATTCGCCAGCTGCCGGACGGTCACAACTTTACCCTGATGTGTCGCGATCTTTCTGAACTCTCGACCTATT > AP012306/1128263‑1128561 | aGGCGTTGAAGGCGTCTGGCAGCTATGGGAACAGCCGCAGAACACCACAGAGAGGGAATTATGAGCCAGTTTTTTTATATTCATCCTGATAACCCACAGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGTGAtt < 1:1149661/150‑1 (MQ=255) gTTGAAGGCGTCTGGCAGCTATGGGAACAGCCGCAGAACACCACAGAGAGGGAATTATGAGCCAGTTTTTTTATATTCATCCTGATAACCCACAGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGTGATTGttt < 2:3489464/150‑1 (MQ=255) tGAAGGCGTCTGGCAGCTATGGGAACAGCCGCAGAACACCACAGAGAGGGAATTATGAGCCAGTTTTTTTATATTCATCCTGATAACCCACAGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGGGATTGgttta > 2:4130550/1‑148 (MQ=255) gAAGGCGTCTGGCAGCTATGGGAACAGCCGCAGAACACCACAGAGAGGGAATTATGAGCCAGTTTTTTTATATTCATCCTGATAACCCACAGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGTGATTGTTTATc < 1:390451/150‑1 (MQ=255) cGTCTGGCAGCTATGGGAACAGCCGCAGAACACCACAGAGAGGGAATTATGAGCCAGTTTTTTTATATTCATCCTGATAACCCACAGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGGGATTGTTTATCCAACt > 2:3375874/1‑150 (MQ=255) gTCTGGCAGCTATGGGAACAGCCGCAGAACACCACAGAGAGGGAATTATGAGCCAGTTTTTTTATATTCATCCTGATAACCCACAGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGGGATTGTTTATCCAACTg > 1:3045097/1‑150 (MQ=255) tGGCAGCTATGGGAACAGCCGCAGAACACCACAGAGAGGGAATTATGAGCCAGTTTTTTTATATTCATCCTGATAACCCACAGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGGGATTGTTTTTACAACTGAtt > 2:3133416/1‑150 (MQ=255) gCAGCTATGGGAACAGCCGCAGAACACCACAGAGAGGGAATTATGAGCCAGTTTTTTTATATTCATCCTGATAACCCACAGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGTGATTGTTTATCCAACTGATTcc < 2:3616443/150‑1 (MQ=255) gCAGCTATGGGAACAGCCGCAGAACACCACAGAGAGGGAATTATGAGCCAGTTTTTTTATATTCATCCTGATAACCCACAGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGTGATTGTTTATCCAACTGATTcc < 1:3192893/150‑1 (MQ=255) ggAACAGCCGCAGAACACCACAGAGAGGGAATTATGAGCCAGTTTTTTTATATTCATCCTGATAACCCACAGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGGGATTGTTTTTCCAACTGGTTGCGGCTATtcg > 2:1965423/1‑150 (MQ=255) ccGCAGAACACCACAGAGAGGGAATTATGAGCCAGTTTTTTTATATTCATCCTGATAACCCACAGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGTGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCt < 1:4223366/150‑1 (MQ=255) ccGCAGAACACCACAGAGAGGGAATTATGAGCCAGTTTTTTTATATTCATCCTGATAACCCACAGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGGGGTTGTTTATCCCACTGATTTCCGCTATGCGCTCGGCt > 1:1011280/1‑150 (MQ=255) cGCAGAACACCACAGAGAGGGAATTATGAGCCAGTTTTTTTATATTCATCCTGATAACCCACAGCAACGTCTTATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGTGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑g < 2:2922812/150‑1 (MQ=255) gCAGAACACCACAGAGAGGGAATTATGAGCCAGTTTTTTTATATTCATCCTGATAACCCACAGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGTGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑Gt < 1:632006/150‑1 (MQ=255) aGAACACCACAGAGAGGGAATTATGAGCCAGTTTTTTTATATTCATCCTGATAACCCACAGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGGGATTGTTTATCCAACTGATTTCGGCTATGCGCCCGGCT‑Gtta > 2:3843663/1‑148 (MQ=255) aaCACCACAGAGAGGGAATTATGAGCCAGTTTTTTTATATTCATCCTGATAACCCACAGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGTGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTaaaa < 2:4011986/150‑1 (MQ=255) acacCACAGAGAGGGAATTATGAGCCAGTTTTTTTATATTCATCCTGATAACCCACAGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGTGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAAt > 1:920887/1‑150 (MQ=255) acaGAGAGGGAATTATGAGCCAGTTTTTTTATATTCATCCTGATAACCCACAGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGTGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAATTGAAg < 1:308495/150‑1 (MQ=255) acaGAGAGGGAATTATGAGCCAGTTTTTTTATATTCATCCTGATAACCCACAGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGGGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAATTGAAg > 1:3440776/1‑150 (MQ=255) acaGAGAGGGAATTATGAGCCAGTTTTTTTATATTCATCCTGATAACCCACAGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGGGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAATTGAAg > 1:2558918/1‑150 (MQ=255) caGAGAGGGAATTATGAGCCAGTTTTTTTATATTCATCCTGATAACCCACAGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGTGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAATTGAAGa < 1:3016798/150‑1 (MQ=255) caGAGAGGGAATTATGAGCCAGTTTTTTTATATTCATCCTGATAACCCACAGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGTGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAATTGAAGa < 1:3941707/150‑1 (MQ=255) caGAGAGGGAATTATGAGCCAGTTTTTTTATATTCATCCTGATAACCCACAGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGGGGTTGTTTATTCAACTGATTTCGGCCATGCGCTCGGCT‑GAAAAATTTaaag > 2:3069724/1‑148 (MQ=255) agagagGGAATTATGAGCCAGTTTTTTTATATTCATCCTGATAACCCACAGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGTGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAATTGAAGAt < 1:750317/150‑1 (MQ=255) agagagGGAATTATGAGCCAGTTTTTTTATATTCATCCTGATAACCCACAGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGTGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAATTGAAGAt < 2:1404831/150‑1 (MQ=255) agagagGGAATTATGAGCCAGTTTTTTTATATTCATCCTGATAACCCACAGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGGGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAATTGAAGAt > 1:179292/1‑150 (MQ=255) gcgagGGAATTATGAGCCAGTTTTTTTATATTCATCCTGATAACCCACAGCAACGTCTGATCAACCAGGCGGTGGAGGTCGTGCGTTAAGGCGGGGGGTAGGTTTATACAACTGGTTTCGGAATTGCGCTCAGCC‑CTTAGATTGAAGATa > 2:905201/3‑150 (MQ=255) agagGGAATTATGAGCCAGTTTTTTTATATTCATCCTGATAACCCACAGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGTGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAATTGAAGATaa < 1:2858841/150‑1 (MQ=255) agagGGAATTATGAGCCAGTTTTTTTATATTCATCCTGATAACCCACAGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGTGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAATTGAAGATaa < 1:4069927/150‑1 (MQ=255) agagGGAATTATGAGCCAGTTTTTTTATATTCATCCTGATAACCCACAGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGTGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAATTGAAGATaa < 1:1188351/150‑1 (MQ=255) agagGGAATTATGAGCCAGTTTTTTTATATTCATCCTGATAACCCACAGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGTGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAATTGAAGATaa < 1:197002/150‑1 (MQ=255) agagGGAATTATGAGCCAGTTTTTTTATATTCATCCTGATAACCCACAGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGGGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAATTGAAGATaa > 1:2661769/1‑150 (MQ=255) gagGGAATTATGAGCCAGTTTTTTTATATTCATCCTGATAACCCACAGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGTGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAATTGAAGATaaa < 2:740851/150‑1 (MQ=255) gagGGAATTATGAGCCAGTTTTTTTATATTCATCCTGATAACCCACAGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGTGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAATTGAAGATaaa < 2:4413861/150‑1 (MQ=255) agGGAATTATGAGCCAGTTTTTTTATATTCATCCTGATAACCCACAGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGGGATTGTTTATCCCACTGATTCCGGCTATGCGCCCGGCT‑GTAAAATTTAAGATaaaa > 2:3295773/1‑150 (MQ=255) ggAATTATGAGCCAGTTTTTTTATATTCATCCTGATAACCCACAGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGGGGTTGTTTATTCCACCGGTTCCCGCTATGCGCTCCGGT‑GTAAAAATTAAGATaaaaaa > 2:2781634/1‑149 (MQ=255) aaTTATGAGCCAGTTTTTTTATATTCATCCTGATAACCCACAGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGTGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAATTGAAGATAAAAAcgc < 2:3773924/150‑1 (MQ=255) aaTTATGAGCCAGTTTTTTTATATTCATCCTGATAACCCACAGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGGGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAATTTAAGATAAAAAcgc > 2:3722489/1‑150 (MQ=255) aaTTATGAGCCAGTTTTTTTATATTCATCCTGATAACCCACAGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGGGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAATTGAAGATAAAAAcgc > 1:2519585/1‑150 (MQ=255) ttATGAGCCAGTTTTTTTATATTCATCCTGATAACCCACAGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGTGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAATTGAAGATAAAAACGCGa < 2:1248981/150‑1 (MQ=255) ttATGAGCCAGTTTTTTTATATTCATCCTGATAACCCACAGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGGGATTGTTTTTCCAACTGATTCCGGGTATTCGCTCGGGC‑GTAAAATTGAAGATAAAAAAGCGa > 2:3956294/1‑150 (MQ=255) aTGAGCCAGTTTTTTTATATTCATCCTGATAACCCACAGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGGGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAATTGAAGATAAAAACGCGATg > 1:3576173/1‑150 (MQ=255) aTGAGCCAGTTTTTTTATATTCATCCTGATAACCCACAGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGGGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAATTGAAGATAAAAACGCGATg > 1:2316173/1‑150 (MQ=255) tGAGCCAGTTTTTTTATATTCATCCTGATAACCCACAGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGTGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAATTGAAGATAAAAACGCGATgg < 1:3059738/150‑1 (MQ=255) tGAGCCAGTTTTTTTATATTCATCCTGATAACCCACAGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGTGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAATTGAAGATAAAAACGCGATgg < 2:2121401/150‑1 (MQ=255) gAGCCAGTTTTTTTATATTCAGCCTGATACCCCAGGGGAAGTTCTGATCAACCAGGCGGTGGGGGTCGGGCGTAAGGGGGGGGGGATTGTTTATCAAACTGATTCGGGGTAGGGGCTGGGCT‑GAAAAATTGAAGAAAAAAACGCGATGGa < 2:1202037/150‑1 (MQ=255) aGCCAGTTTTTTTATATTCATCCTGATAACCCACAGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGTGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAATTGAAGATAAAAACGCGATGGAg < 2:1115536/150‑1 (MQ=255) aGCCAGTTTTTTTATATTCATCCTGATAACCCACAGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGGGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAATTTAAGATAAAAACGCGATGGAg > 1:2893477/1‑150 (MQ=255) gCCAGTTTTTTTATATTCATCCTGATAACCCACAGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGTGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAATTGAAGATAAAAACGCGATGGAGc < 2:808085/150‑1 (MQ=255) cAGTTTTTTTATATTCATCCTGATAACCCACAGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGTGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAATTGAAGATAAAAACGCGATGGAGCGt < 1:2190263/150‑1 (MQ=255) cAGTTTTTTTATATTCATCCTGATAACCCACAGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGTGAATGTTTAACCAACTGATTACCGGTCTGCGCCACGCTGGTAAAATT‑AAGATAAAAAAGCGATGGAGCGt > 2:616391/1‑150 (MQ=255) aGTTTTTTTATATTCATCCTGATAACCCACAGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGGGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAATTTAAGATAAAAACGCGATGGAGCGTa > 2:1626605/1‑150 (MQ=255) ttttttATATTCATCCTGATAACCCACAGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGTGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAATTGAAGATAAAAACGCGATGGAGCGTAttt < 2:4309833/150‑1 (MQ=255) ttttATATTCATCCTGATAACCCACAGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGTGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAATTGAAGATAAAAACGCGATGGAGCGTATTTGt < 1:148300/150‑1 (MQ=255) tataTTCATCCTGATAACCCACAGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGGGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTGAAATTGAAGATAAAAAATCGATTGGGCGTAtttttagt > 2:2273630/1‑145 (MQ=255) tatTCATCCTGATAACCCACAGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGGGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAATTGAAGATAAAAACGCGATGGAGCGGATTTGTCGTAt > 1:3341545/1‑150 (MQ=255) ttCATCCTGATAACCCACAGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGTGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAATTGAAGATAAAAACGCGATGGAGCGTATTTGTCGTATTc < 1:450962/150‑1 (MQ=255) ttCATCCTGATAACCCACAGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGGGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAATTGAAGATAAAAACGCGATGGAGCGTATTTGTCGTATTc > 1:2250834/1‑150 (MQ=255) aTCCTGATAACCCACAGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGTGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAATTGAAGATAAAAACGCGATGGAGCGTATTTGTCGTATTCGcc < 1:4109313/150‑1 (MQ=255) tCCTGATAACCCACAGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGTGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAATTGAAGATAAAAACGCGATGGAGCGTATTTGTCGTATTNGCCa < 1:2781585/150‑1 (MQ=255) tCCTGATAACCCACAGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGGGATTGTTTATCCAACTTATTCCGGCTATGCGCTCGGCT‑GTAAAATTGAAGATAAAAACGCGATGGGGCGGATTTTTCGTATTCGCCa > 2:2710287/1‑150 (MQ=255) tCCTGATAACCCACAGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGGGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAATTGAAGATAAAAACGCGATGGAGCGGATTTGTCGTATTCGCCa > 2:4044727/1‑150 (MQ=255) ccTGATAACCCACAGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGTGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAATTGAAGATAAAAACGCGATGGAGCGTATTTGTCGTATTCGCCAg < 1:3263299/150‑1 (MQ=255) cTGATAACCCACAGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGTGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAATTGAAGATAAAAACGCGATGGAGCGTATTTGTCGTATTCGCCAGc > 1:168252/1‑150 (MQ=255) tGATAACCCACAGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGTGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAATTGAAGATAAAAACGCGATGGAGCGTATTTGTCGTATTCGCCAGCt < 2:3255361/150‑1 (MQ=255) tGATAACCCACAGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGTGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAATTGAAGATAAAAACGCGATGGAGCGTATTTGTCGTATTCGCCAGCt < 1:2395616/150‑1 (MQ=255) tGATAACCCACAGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGTGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAATTGAAGATAAAAACGCGATGGAGCGTATTTGTCGTATTCGCCAGCt > 2:517809/1‑150 (MQ=255) aaCCCACAGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGTGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAATTGAAGATAAAAACGCGATGGAGCGTATTTGTCGTATTCGCCAGCTGCCg < 2:3014991/150‑1 (MQ=255) acaGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGTGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAATTGAAGATAAAAACGCGATGGAGCGTATTTGTCGTATTCGCCAGCTGCCGGACgg < 1:1082340/150‑1 (MQ=255) aGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGTGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAATTGAAGATAAAAACGCGATGGAGCGTATTTGTCGTATTCGCCAGCTGCCGGACGGTc < 1:1320795/150‑1 (MQ=255) aGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGGGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAATTGAAGATAAAAACGCGATGGGGCGTATTTGTCGTATTCGCCAGCTGCCGGACGGTc > 2:2406109/1‑150 (MQ=255) aGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGGGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAATTGAAGATAAAAACGCGATGGAGCGTATTTGTCGTATTCGCCAGCTGCCGGACGGTc > 1:671670/1‑150 (MQ=255) aGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGGGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAATTGAAGATAAAAACGCGATGGAGCGTATTTGTCGTATTCGCCAGCTGCCGGAAgggc > 2:468099/1‑148 (MQ=255) aCGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGTGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAATTGAAGATAAAAACGCGATGGAGCGTATTTGTCGTATTCGCCAGCTGCCGGACGGTCACaa < 2:2451942/150‑1 (MQ=255) aTCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGTGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAATTGAAGATAAAAACGCGATGGAGCGTATTTGTCGTATTCGCCAGCTGCCGGACGGTCACAACTTTAcc < 1:2072971/150‑1 (MQ=255) aTCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGTGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAATTGAAGATAAAAACGCGATGGAGCGTATTTGTCGTATTCGCCAGCTGCCGGACGGTCACAACTTTAcc < 2:153689/150‑1 (MQ=255) aaCCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGTGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAATTGAAGATAAAAACGCGATGGAGCGTATTTGTCGTATTCGCCAGCTGCCGGACGGTCACAACTTTACCCTg < 1:3801289/150‑1 (MQ=255) aCCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGTGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAATTGAAGATAAAAACGCGATGGAGCGTATTTGTCGTATTCGCCAGCTGCCGGACGGTCACAACTTTACCCTGa > 1:3986251/1‑150 (MQ=255) cGGTGGAGATCGTGCGTAAAGGCGGGGTGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAATTGAAGATAAAAACGCGATGGAGCGTATTTGTCGTATTCGCCAGCTGCCGGACGGTCACAACTTTACCCTGATGTGTc < 1:2924959/150‑1 (MQ=255) ggTGGAGATCGTGCGTAAAGGCGGGGTGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAATTGAAGATAAAAACGCGATGGAGCGTATTTGTCGTATTCGCCAGCTGCCGGACGGTCACAACTTTACCCTGATGTGTcg > 1:1563919/1‑150 (MQ=255) tGGAGATCGTGCGTAAAGGCGGGGGGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAATTGAAGATAAAAACGCGATGGAGCGTATTTGTCGTATTCGCCAGCTGCCGGACGGTCACAACTTTACCCTGATGTGTcgcg > 2:2073255/1‑150 (MQ=255) gagaTCGTGCGTAAAGGCGGGGTGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAATTGAAGATAAAAACGCGATGGAGCGTATTTGTCGTATTCGCCAGCTGCCGGACGTTCACAACTTTACCCTGATGTGTCGCGAt < 2:1275962/150‑1 (MQ=255) agaTCGTGCGTAAAGGCGGGGGGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAATTGAAGATAAAAACGCGATGGAGCGGATTTGTCGTATTCGCCAGCTGCCGGACGGTCACAACCTTACCCTGATGTGTCGCGATc > 1:956700/1‑150 (MQ=255) aTCGTGCGTATAGGCGGGGTGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAATTGAAGATAAAAACGCGATGGAGCGTATTTGTCGTATTCGCCAGCTGCCGGACGGTCACAACTTTACCCTGATGTGTCGCGATCtt < 1:4294342/150‑1 (MQ=255) aTCGTGCGTAAAGGCGGGGTGATTGTTTATCCAACTGATTCCGGCTATGCGCCCCGCT‑GTAAAATTGAAGATAAGAACCCGATGGAGCGTCTTTTTCCTCTTCGCCAGCTCCCGGCCGGTCACCACTTTACCCTGATGTGTCGCGCTCtt > 2:3555246/1‑150 (MQ=255) gTGCGTAAAGGCGGGGTGATTGTTTTTCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAATTGAAGATAAAAACGCGATGGAGCGTATTTGTCGTATTCGCCAGCTGCCGGACGGTCACAACTTTACCCTGATGTGTCGCGATCTTTCt < 2:2317575/150‑1 (MQ=255) gCGTAAAGGCGGGGTGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAATTGAAGATAAAAACGCGATGGAGCGTATTTGTCGTATTCGCCAGCTGCCGGACGGTCACAACTTTACCCTGATGTGTCGCGATCTTTCTGa < 2:1350012/150‑1 (MQ=255) cGTAAAGGCGGGGTGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAATTGAAGATAAAAACGCGATGGAGCGTATTTGTCGTATTCGCCAGCTGCCGGACGGTCACAACTTTACCCTGATGTGTCGCGATCTTTCTGaa < 2:1452563/150‑1 (MQ=255) gTAAAGGCGGGGTGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAATTGAAGATAAAAACGCGATGGAGCGTATTTGTCGTATTCGCCAGCTGCCGGACGGTCACAACTTTACCCTGATGTGTCGCGATCTTTCTGAAc < 1:3734893/150‑1 (MQ=255) gTAAAGGCGGGGGGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAATTGAAGATAAAAACGCGATGGGGCGGATTTGTCGTATTCGCCAGCTGCCGGACGGTCACAACTTTACCCTGATGTGTCGCGATCTTTCTGAAc > 2:86454/1‑150 (MQ=255) tAAAGGCGGGGTGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAATTGAAGATAAAAACGCGATGGAGCGTATTTGTCGTATTCGCCAGCTGCCGGACGGTCACAACTTTACCCTGATGTGTCGCGATCTTTCTGAAct < 1:4375089/150‑1 (MQ=255) aaaGGCGGGGTGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAATTGAAGATAAAAACGCGATGGAGCGTATTTGTCGTATTCGCCAGCTGCCGGACGGTCACAACTTTACCCTGATGTGTCGCGATCTTTCTGAActc < 2:1835201/150‑1 (MQ=255) aaGGCGGGGTGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAATTGAAGATAAAAACGCGATGGAGCGTATTTGTCGTATTCGCCAGCTGCCGGACGGTCACAACTTTACCCTGATGTGTCGCGATCTTTCTGAActct > 1:3663874/1‑150 (MQ=255) aaGGCGGGGTGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAATTGAAGATAAAAACGCGATGGAGCGTATTTGTCGTATTCGCCAGCTGCCGGACGGTCACAACTTTACCCTGATGTGTCGCGATCTTTCTGAActct > 2:1680887/1‑150 (MQ=255) aaGGCGGGGTGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAATTGAAGATAAAAACGCGATGGAGCGTATTTGTCGTATTCGCCAGCTGCCGGACGGTCACAACTTTACCCTGATGTGTCGCGATCTTTCTGAActct < 2:2488557/150‑1 (MQ=255) aGGCGGGGTGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAATTGAAGATAAAAACGCGATGGAGCGTATTTGTCGTATTCGCCAGCTGCCGGACGGTCACAACTTTACCCTGATGTGTCGCGATCTTTCTGAACtctc < 1:2109818/150‑1 (MQ=255) ggCGGGGTGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAATTGAAGATAAAAACGCGATGGAGCGTATTTGTCGTATTCGCCAGCTGCCGGACGGTCACAACTTTACCCTGATGTGTCGCGATCTTTCTGAACTCTCg < 2:1871764/150‑1 (MQ=255) cGGGGTGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAATTGAAGATAAAAACGCGATGGAGCGTATTTGTCGTATTCGCCAGCTGCCGGACGGTCACAACTTTACCCTGATGTGTCGCGATCTTTCTGAACTCTCGAc < 1:1846744/150‑1 (MQ=255) cGGGGTGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAATTGAAGATAAAAACGCGATGGAGCGTATTTGTCATATTCGCCAGCTGCCGGACGGTCACAACTTTACCCTGATGTGTCGCGATCTTTCTGAACTCTCGAc < 2:3339769/150‑1 (MQ=255) gTGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAATTGAAGATAAAAACGCGATGGAGCGTATTTGTCGTATTCGCCAGCTGCCGGACGGTCACAACTTTACCCTGATGTGTCGCGATCTTTCTGAACTCTCGACCTAt < 1:3458561/150‑1 (MQ=255) | CCGCAGGCGTTGAAGGCGTCTGGCAGCTATGGGAACAGCCGCAGAACACCACAGAGAGGGAATTATGAGCCAGTTTTTTTATATTCATCCTGATAACCCACAGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGTGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCT‑GTAAAATTGAAGATAAAAACGCGATGGAGCGTATTTGTCGTATTCGCCAGCTGCCGGACGGTCACAACTTTACCCTGATGTGTCGCGATCTTTCTGAACTCTCGACCTATT > AP012306/1128263‑1128561 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |