| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | AP012306 | 342,357 | (C)6→5 | intergenic (+56/‑33) | ribD → / → ribE | fused diaminohydroxyphosphoribosylaminopyrimidin e deaminase and 5‑amino‑6‑(5‑phosphoribosylamino) uracil reductase/riboflavin synthase beta chain |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AP012306 | 342,352 | 0 | C | . | 99.6% | 1211.0 / ‑4.2 | 245 | intergenic (+51/‑38) | ribD/ribE | fused diaminohydroxyphosphoribosylaminopyrimidin e deaminase and 5‑amino‑6‑(5‑phosphoribosylamino) uracil reductase/riboflavin synthase beta chain |
| Reads supporting (aligned to +/- strand): ref base C (0/1); new base . (110/134); total (110/135) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 268 total aligned reads displayed.
CTGCCAGGGCTTGAGAAATTAGCCGACGCCCCCCAATTTAAATTCAAAGAGATACGTCATGTAGGCCCGGATGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCCGCCCCCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCTCGCGTCGCCATCACCATCGCGCGTTTCAACAACTTTATCAATGACAGCCTGCTGGAAGGTGCAATTGACG > AP012306/342203‑342498 | gCCAGGGCTTGAGAAATTAGCCGACGCCCCCCAATTTAAATTCAAAGAGATACGTCATGTAGGCCCGGATGTTTGCCTGTATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCCGccc > 1:3672011/1‑150 (MQ=255) ccAGGGCTTGAGAAATTAGCCGACGCCCCCCAATTTAAATTCAAAGAGATACGTCATGTAGGCCCGGATGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCCGcccc > 1:1550839/1‑150 (MQ=255) ttGAGAAATTAGCCGACGCCCCCCAATTTAAATTCAAAGAGATACGTCATGTAGGCCCGGATGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCggg > 1:3031538/1‑150 (MQ=255) ttGAGAAATTAGACGACGCCCCCCAATTTAAATTCAAAGAGATACGTCATGTAGGCCCGGATGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCggg > 2:4162876/1‑150 (MQ=255) tGAGAAATTAGCCGACGCCCCCCAATTTAAATTCAAAGAGATACGTCATGTAGGCCCGGATGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCCGcccccggcgagg > 2:2518731/1‑143 (MQ=255) tGAGAAATTAGCCGACGCCCCCCAATTTAAATTCAAAGAGATACGTCATGTAGGCCCGGATGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCgggg > 2:4090044/1‑150 (MQ=255) agaAATTAGCCGACGCCCCCCAATTTAAATTCAAAGAGATACGTCATGTAGGCCCGGATGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGcc > 1:3975955/1‑150 (MQ=255) agaAATTAGCCGACGCCCCCCAATTTAAATTCAAAGAGATACGTCATGTAGGCCCGGATGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGcc > 2:1285442/1‑150 (MQ=255) gaAATTAGCCGACGCCCCCCAATTTAAATTCAAAGAGATACGTCATGTAGGCCCGGATGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCa > 2:75944/1‑150 (MQ=255) aaaTTAGCCGACGCCCCCCAATTTAAATTCAAAGAGATACGTCATGTAGGCCCGGATGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCAt > 2:1699220/1‑150 (MQ=255) aaaTTAGCCGACGCCCCCCAATTTAAATTCAAAGAGATACGTCATGTAGGCCCGGATGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCAt < 2:1412429/150‑1 (MQ=255) aaaTTAGCCGACGCCCCCCAATTTAAATTCAAAGAGATACGTCATGTAGGCCCGGATGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCAt > 1:2644140/1‑150 (MQ=255) aaaTTAGCCGACGCCCCCCAATTTAAATTCAAAGAGATACGTCATGTAGGCCCGGATGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCAt > 2:500494/1‑150 (MQ=255) tAGCCGACGCCCCCCAATTTAAATTCAAAGAGATACGTCATGTAGGCCCGGATGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGGCATACTc > 2:786285/1‑150 (MQ=255) cGACGCCCCCCAATTTAAATTCAAAGAGATACGTCATGTAGGCCCGGATGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAAc > 1:3361402/1‑150 (MQ=255) cGACGCCCCCCAATTTAAATTCAAAGAGATACGTCATGTAGGCCCGGATGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAAc > 2:3663157/1‑150 (MQ=255) cGACGCCCCCCAATTTAAATTCAAAGAGATACGTCATGTAGGCCCGGATGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAAc < 1:3138493/150‑1 (MQ=255) aCGCCCCCCAATTTAAATTCAAAGAGATACGTCATGTAGGCCCGGATGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAAccc > 1:1151812/1‑150 (MQ=255) gCCCCCCAATTTAAATTCAAAGAGATACGTCATGTAGGCCCGGATGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCga > 1:1556604/1‑150 (MQ=255) gCCCCCCAATTTAAATTCAAAGAGATACGTCATGTAGGCCCGGATGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCga > 2:1051050/1‑150 (MQ=255) ccccccAATTTAAATTCAAAGAGATACGTCATGTAGGCCCGGATGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCgaa < 1:908895/150‑1 (MQ=255) cccccAATTTAAATTCAAAGAGATACGTCATGTAGGCCCGGATGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCgaag > 1:2132628/1‑150 (MQ=255) cccccAATTTAAATTCAAAGAGATACGTCATGTAGGCCCGGATGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCgaag < 1:134714/150‑1 (MQ=255) ccccAATTTAAATTCAAAGAGATACGTCATGTAGGCCCGGATGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCgaagg > 1:3796057/1‑150 (MQ=255) ccAATTTAAATTCAAAGAGATACGTCATGTAGGCCCGGATGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCgaaggaa < 2:1844808/150‑1 (MQ=255) cAATTTAAATTCAAAGAGATACGTCATGTAGGCCCGGATGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCgaaggaag > 1:2325923/1‑150 (MQ=255) tttAAATTCAAAGAGATACGTCATGTAGGCCCGGATGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCGAAGGAAGaaa > 2:1448284/1‑150 (MQ=255) ttAAATTCAAAGAGATACGTCATGTAGGCCCGGATGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCGAAGGAAGaaaa > 2:1550565/1‑150 (MQ=255) ttAAATTCAAAGAGACACGTCATGTAGGCCCGGATGTCTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCGAAGGAAGaaaa < 2:3289881/150‑1 (MQ=255) aaaTTCAAAGAGATACGTCATGTAGGCCCGGATGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATg > 1:3584433/1‑150 (MQ=255) aaTTCAAAGAGATACGTCATGTAGGCCCGGATGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGa < 2:68269/150‑1 (MQ=255) ttCAAAGAGATACGTCATGTAGGCCCGGATGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTAAGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAAc < 2:3416787/150‑1 (MQ=255) aaaGAGATACGTCATGTAGGCCCGGATGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACatt < 1:2698340/150‑1 (MQ=255) agagATACGTCATGTAGGCCCGGATGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACattat > 2:2375909/1‑150 (MQ=255) agagATACGTCATGTAGGCCCGGATGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACattat < 2:2201374/150‑1 (MQ=255) agaTACGTCATGTAGGCCCGGATGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTg > 1:1396242/1‑150 (MQ=255) agaTACGTCATGTAGGCCCGGATGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTg < 1:4070308/150‑1 (MQ=255) gaTACGTCATGTAGGCCCGGATGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGa < 2:728248/150‑1 (MQ=255) gaTACGTCATGTAGGCCCGGATGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGa < 1:2417698/150‑1 (MQ=255) tACGTCATGTAGGCCCGGATGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAg < 1:539194/150‑1 (MQ=255) cGTCATGTAGGCCCGGATGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCTG‑CCCCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCt > 1:170217/1‑150 (MQ=255) tCATGTAGGCCCGGATGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTaa < 2:110560/150‑1 (MQ=255) cATGTAGGCCCGGATGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAAc > 2:2215798/1‑150 (MQ=255) cATGTAGGCCCGGATGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAAc > 2:3988755/1‑150 (MQ=255) aTGTAGGCCCGGATGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACg > 1:2811312/1‑150 (MQ=255) gTAGGCCCGGATGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGtt < 1:204479/150‑1 (MQ=255) tAGGCCCGGATGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTg < 2:709829/150‑1 (MQ=255) aGGCCCGGATGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGc < 2:2939759/150‑1 (MQ=255) ggCCCGGATGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCt < 2:915670/150‑1 (MQ=255) cccGGATGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTAc > 1:2491843/1‑150 (MQ=255) aTGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCgg < 1:1083251/150‑1 (MQ=255) aTGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCgg < 1:3748932/150‑1 (MQ=255) gTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGAc < 1:1869862/150‑1 (MQ=255) gTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGAc > 1:1462761/1‑150 (MQ=255) tGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCt > 1:3041294/1‑150 (MQ=255) gCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCTc > 2:4028883/1‑150 (MQ=255) gCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCTc > 1:3443007/1‑150 (MQ=255) ccTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCTcg > 2:2096966/1‑150 (MQ=255) gCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCTCGCGt > 1:2226144/1‑150 (MQ=255) cATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCTCGCGTc > 2:312847/1‑150 (MQ=255) tAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCTCGCGTCGCCa < 1:3250867/150‑1 (MQ=255) gggTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCTCGCGTCGCCATCAc < 2:254928/150‑1 (MQ=255) tGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCTCGCGTCGCCATCACCAt < 2:3204354/150‑1 (MQ=255) tGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCTCGCGTCGCCATCACCAt > 1:590041/1‑150 (MQ=255) gCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCTCGCGTCGCCATCACCATc < 2:3573407/150‑1 (MQ=255) cATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCTCGCGTCGCCATCACCATcg > 2:3386867/1‑150 (MQ=255) tGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCTCGCGTGGCCATCACCATcgcg > 2:3469282/1‑150 (MQ=255) tGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCTCGCGTCGCCATCACCATcgcg < 1:1176085/150‑1 (MQ=255) tctcCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCTCGCGTCGCCATCACCATCGCGCGt < 2:565329/150‑1 (MQ=255) cTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCTCGCGTCGCCATCACCATCGCGCGTTTcaacaa < 2:1853500/150‑1 (MQ=255) gAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCTCGCGTCGCCATCACCATCGCGCGTTTCAACAACtt > 1:1622034/1‑150 (MQ=255) gAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCTCGCGTCGCCATCACCATCGCGCGTTTCAACAACtt > 1:124135/1‑150 (MQ=255) aaaGGGAAGCAGCGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCTCGCGTCGCCATCACCATCGCGCGTTTCAACAACttt < 2:2444084/150‑1 (MQ=255) aGGGAAGCAGCGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCTCGCGTCGCCATCACCATCGCGCGTTTCAACAACTTTAt < 2:1602413/150‑1 (MQ=255) gggAAGCAGCGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCTCGCGTCGCCATCACCATCGCGCGTTTCAACAACTTTATc < 1:847070/150‑1 (MQ=255) aaGCAGCGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCTCGCGTCGCCATCACCATCGCGCGTTTCAACAACTTTATCAAt > 1:3435021/1‑150 (MQ=255) aaGCAGCGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCTCGCGTCGCCATCACCATCGCGCGTTTCAACAACTTTATCAAt < 2:2007351/150‑1 (MQ=255) agcagcGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCTCGCGTCGCCATCACCATCGCGCGTTTCAACAACTTTATCAATg < 1:2001485/150‑1 (MQ=255) agcagcGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCTCGCGTCGCCATCACCATCGCGCGTTTCAACAACTTTATCAATg < 1:2203222/150‑1 (MQ=255) cagcGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCTCGCGTCGCCATCACCATCGCGCGTTTCAACAACTTTATCAATGAc > 2:26265/1‑150 (MQ=255) cagcGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCTCGCGTCGCCATCACCATCGCGCGTTTCAACAACTTTATCAATGAc > 2:2993915/1‑150 (MQ=255) agcGCACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCTCGCGTCGCCATCACCATCGCGCGTTTCAACAACTTTATCAATGACa < 1:1035328/150‑1 (MQ=255) gcgcACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCTCGCGTCGCCATCACCATCGCGCGTTTCAACAACTTTATCAATGACAg < 2:2161089/150‑1 (MQ=255) gcACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCTCGCGTCGCCATCACCATCGCGCGTTTCAACAACTTTATCAATGACAGcc > 2:3743598/1‑150 (MQ=255) gcACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCTCGCGTCGCCATCACCATCGCGCGTTTCAACAACTTTATCAATGACAGcc < 1:1771249/150‑1 (MQ=255) cACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCTCGCGTCGCCATCACCATCGCGCGTTTCAACAACTTTATCAATGACAGCct > 1:79011/1‑150 (MQ=255) cACGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCTCGCGTCGCCATCACCATCGCGCGTTTCAACAACTTTATCAATGACAGCct > 1:2531595/1‑150 (MQ=255) aCGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCTCGCGTCGCCATCACCATCGCGCGTTTCAACAACTTTATCAATGACAGCctg > 1:4010539/1‑150 (MQ=255) aCGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCTCGCGTCGCCATCACCATCGCGCGTTTCAACAACTTTATCAATGACAGCctg > 2:84090/1‑150 (MQ=255) cGAAATATTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCTCGCGTCGCCATCACCATCGCGCGTTTCAACAACTTTATCAATGACAGCctgc < 1:326867/150‑1 (MQ=255) atatTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCTCGCGTCGCCATCACCATCGCGCGTTTCAACAACTTTATCAATGACAGCCTGCTGGa > 1:2738825/1‑150 (MQ=255) atatTATGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCTCGCGTCGCCATCACCATCGCGCGTTTCAACAACTTTATCAATGACAGCCTGCTGGa > 2:116846/1‑150 (MQ=255) tattatGCTAAAATCCG‑CCCCCTGCGGGGCCATAGTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCTCGCGTCGCCATCACCACCGCGCGTTTCAACAACTTTATCAATGACAGCCTGCTGGaa < 2:2326268/150‑1 (MQ=255) attatGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCTCGCGTCGCCATCACCATCGCGCGTTTCAACAACTTTATCAATGACAGCCTGCTGGAAg < 1:418213/150‑1 (MQ=255) attatGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCTCGCGTCGCCATCACCATCGCGCGTTTCAACAACTTTATCAATGACAGCCTGCTGGAAg < 1:43819/150‑1 (MQ=255) atGCTAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCTCGCGTCGCCATCACCATCGCGCGTTTCAACAACTTTATCAATGACAGCCTGCTGGAAGGTg > 2:2854241/1‑150 (MQ=255) tAAAATCCG‑CCCCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCTCGCGTCGCCATCACCATCGCGCGTTTCAACAACTTTATCAATGACAGCCTGCTGGAAGGTGCAAt < 1:1509006/150‑1 (MQ=255) aaaaTCCG‑CCCCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCTCGCGTCGCCATCACCATCGCGCGTTTCAACAACTTTATCAATGACAGCCTGCTGGAAGGTGCAAtt < 1:67863/150‑1 (MQ=255) aaaTCCG‑CCCCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCTCGCGTCGCCATCACCATCGCGCGTTTCAACAACTTTATCAATGACAGCCTGCTGGACGGTGCAATTg > 1:4199230/1‑150 (MQ=255) aatccccccccTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCTCGCGTCGCCATCACCATCGCGCGTTTCAACAACTTTATCAATGACAGCCTGCTGGAAGGTGCAATTGa > 1:501011/6‑150 (MQ=255) | CTGCCAGGGCTTGAGAAATTAGCCGACGCCCCCCAATTTAAATTCAAAGAGATACGTCATGTAGGCCCGGATGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCCGCCCCCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCTCGCGTCGCCATCACCATCGCGCGTTTCAACAACTTTATCAATGACAGCCTGCTGGAAGGTGCAATTGACG > AP012306/342203‑342498 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |