| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP012306 | 2780478 = | 290 (0.930) | 10 (0.030) | 8/288 | 16.6 | 3.4% | coding (716/1890 nt) | deaD | ATP‑dependent RNA helicase |
| ? | AP012306 | 2780499 = | 281 (0.930) | coding (695/1890 nt) | deaD | ATP‑dependent RNA helicase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CAACCATGCCGGAAGCGATTCGTCGCATTACCCGCCGCTTTATGAAAGAGCCGCAGGAAGTGCGCATTCAGTCCAGCGTGACTACCCGTCCTGACATCAGCCAGAGCTACTGGACTGTCT‑GGGGTATGCGCAAAAACGAAGCACTGGTACGTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP012306/2780631‑2780478‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtttTTGCGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACGCTGGACTGAATGCGCACTTCCTGCGGCTCTTTCATAAAGCGGCGGGTAATGCGACGAATCGCTTCCGGCATGGTTGCAGAGAACAGAGCGGT > AP012306/2780499‑2780647 cacCCATGCCGGAAGCGATTCGTCGCATTACCCGCCGCTTTATGAAAGAGCCGCAGGAAGTGCGCATTCAGTCCAGCGTGACTACCCGTCCTGACATCAGCCAGAGCTACTGGACTGTCT‑GGGGTATGCGCAAAAACGAAGCACTGGTAC < 2:1907714/147‑1cacCCATGCCGGAAGCGATTCGTCGCATTACCCGCCGCTTTATGAAAGAGCCGCAGGAAGTGCGCATTCAGTCCAGCGTGACTACCCGTCCTGACATCAGCCAGAGCTACTGGACTGTCT‑GGGGTATGCGCAAAAACGAAGCACTGGTAC < 1:1646010/147‑1cacCCATGCCGAAAGCGATTCGTCGCATACCCCGCCGCTTTATGAAAGAGCCGCAGGAAGTGCGCATTCAGTCCAGCGTGACTACCCGTCCTGACATCAGCCAGAGCTACTGGACTGTCT‑GGGGTATGCGCAAAAACGAAGCACTGGTAC < 2:3604579/147‑1 AACCATGCCGGAAGCGATTCGTCGCATTACCCGCCGCTTTATGAAAGAGCCGCAGGAAGTGCGCATTCAGTCCAGCGTGACTACCCGTCCTGACATCAGCCAGAGCTACTGGACTGTCT‑GGGGTATGCGCAAAAACGAAGCACTGGTACG > 1:3479068/1‑150 cCCATGCGGGAAGCGATCCGGCGCATTCCCCGCCGCTTTATGAAAGAGCCGCAGGAAGTGCGCATTCAGTCCAGCGTGACTACCCGTCCTGACATCAGCCAGAGCTACTGGACTGTCT‑GGGGTATGCGCAAAAACGAAGCACTGGTACGT < 1:2598198/149‑1 CCATGCCGGAAGTGTTTCGCGGCATTCCCCGCCGCTTTATGAAAGAGCCGCAGGAAGTGCGCATTCAGTCCAGCGTGACTACACGTCCTGACATCAGCCAGAGCTACTGGACTGTCT‑GGGGTATGCGCAAAAACGAAGCACTGGTACGTT < 2:3619352/150‑1 CCATGCCGGAAGCGATTCGTCGCATTCCCCGCCGCTTTATGAAAGAGCCGCAGGAAGTGCGCATTCAGTCCAGCGTGACTACCCGTCCTGACATCAGCCAGAGCTACTGGACTGTCT‑GGGGTATGCGCAAAAACGAAGCACTGGTACGTT < 1:2985234/150‑1 CCATGCCGGAAGCGATTCGTCGCATTACCCGCCGCTTTATGAAAGAGCCGCAGGAAGTGCGCATTCAGTCCAGCGTGACTACCCGTCCTGACATCAGCCAGAGCTACTGGACTGTCT‑GGGGTATGCGCAAAAACGAAGCACTGGTACGTT > 2:365732/1‑150 ccTGCCGGAACCTTTTCCCCCCATTCCCCGCCGCTTTATGAAAGAGCCGCATGAAGTGCCCATTCAGCCCAGCGTGACTACCCGTCCTGACATCAGCCAGAGCTACTGGACTGTCT‑GGGGTATGCGCAAAAACGAAGCACTGGTACGTTT < 2:1498713/148‑1 CATGCCGGAAGCGATTCGTCGCATTACCCGCCGCTTTATGAAAGAGCCGCAGGAAGTGCGCATTCAGTCCAGCGTGACTACCCGTCCTGACATCAGCCAGAGCTACTGGACTGTCT‑GGGGTATGCGCAAAAACGAAGCACTGGTACGTTT > 1:3391533/1‑150 ATGCCGGAAGCGATTCGTCGCATTCCCCGCCGCTTTATGAAAGAGCCGCAGGAAGTGCGCATTCAGTCCAGCGTGACTACCCGTCCTGACATCAGCCAGAGCTACTGGACTGTCTGGGGGTATGCGCAAAAACGAAGCACTGGTACGTTT < 1:63292/150‑1 CCGGAAGCGATTCGTCGCATTACCCGCCGCTTTATGAAAGAGCCGCAGGAAGTGCGCATTCAGTCCAGCGTGACTACCCGTCCTGACATCAGCCAGAGCTACTGGACTGTCT‑GGGGGATGCGCCAAAACGAAGCACTGGTACGTTTTTGC > 1:878265/1‑150 GAAAGAGCCGCAGGAAGTGCGCATTCAGTCCAGCGTGACTACCCGTCCTGACATCAGCCAGAGCTACTGGACTGTCT‑GGGGTATGCGCAAAAACGAAGCACTGGTACGTTTTTGCGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATG < 2:688226/150‑1 GAGCCGCAGGAAGTGCGCATTCAGTCCAGCGTGACTACCCGTCCTGACATCAGCCAGAGCTACTGGACTGTCT‑GGGGTATGCGCAAAAACGAAGCACTGGTACGTTTTTGCGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAG < 2:3974553/150‑1 CCAGCGTGACTACCCGTCCTGACATCAGCCAGAGCTACTGGACTGTCT‑GGGGTATGCGCAAAAACGAAGCACTGGTACGTTTTTGCGCATACCCCAGACAGTCCAGTAGC > 1:365323/1‑110 CCAGCGTGACTACCCGTCCTGACATCAGCCAGAGCTACTGGACTGTCT‑GGGGTATGCGCAAAAACGAAGCACTGGTACGTTTTTGCGCATACCCCAGACAGTCCAGTAGC < 2:365323/110‑1 CTACCCGTCCTGACATCAGCCAGAGCTACTGGACTGTCT‑GGGGTATGCGCAAAAACGAAGCACTGGTACGTTTTTGCGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACGCTGGACTGAATGCGCACTTC < 2:1410078/150‑1 CTACCCGTCCTGACATCAGCCAGAGCTACTGGACTGTCT‑GGGGTATGCGCAAAAACGAAGCACTGGTACGTTTTTGCGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACGCTGGACTGAATGCGCACTTC < 2:3989167/150‑1 CCTGACATCAGCCAGAGCTACGGGACTGTCG‑GGGGTATGCGAAAAAACGAAGCACGGGTACGTTTTTGCGCATCCCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACGCTGGACTGAATGCGCACTTCCTGCGGCT < 2:878265/150‑1 ACATCAGCCAGAGCTACTGGACTGTCT‑GGGGTAGGCGCAAAACCGAAGCACTGGTACGTTTTTGCGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACGCTGGACTGAATGCGCACTTCCTGCGGCTCTTT < 2:642336/150‑1 ACACCAGCCAGGGCTATTGGACTGTCT‑GGGGTATGCGAAAAAACGAAGCACTGGTACGTTTTTGCGAATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACGCTGGACTGAATGCGCACTTCCTGCGGCTCTTT < 2:125028/150‑1 GTTTTTGCGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACGCTGGACTGAATGCGCACTTCCTGCGGCTCTTTCATAAAGCGGCGGGTAATGCGACGAATCGCTTCCGGCATGGTTGCAGAGAACAGAGC < 1:2909370/150‑1 GTTTTTGCGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACGCTGGACTGAATGCGCACTTCCTGCGGCTCTTTCATAAAGCGGCGGGTAATGCGACGAATCGCTTCCGGCATGGTTGCAGAGAACAGAGC < 2:40779/150‑1 TTTGCGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACGCTGGACTGAATGCGCACTTCCTGCGGCTCTTTCATAAAGCGGCGGGTAATGCGACGAATCGCTTCCGGCATGGTTGCAGAGAACAGAGCGGT < 1:4211190/150‑1 CAACCATGCCGGAAGCGATTCGTCGCATTACCCGCCGCTTTATGAAAGAGCCGCAGGAAGTGCGCATTCAGTCCAGCGTGACTACCCGTCCTGACATCAGCCAGAGCTACTGGACTGTCT‑GGGGTATGCGCAAAAACGAAGCACTGGTACGTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP012306/2780631‑2780478‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtttTTGCGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACGCTGGACTGAATGCGCACTTCCTGCGGCTCTTTCATAAAGCGGCGGGTAATGCGACGAATCGCTTCCGGCATGGTTGCAGAGAACAGAGCGGT > AP012306/2780499‑2780647 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |