| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP012306 | 1042309 = | 406 (1.190) | 8 (0.020) | 8/290 | 23.0 | 2.0% | coding (361/1533 nt) | ycgB | conserved protein |
| ? | AP012306 | 1042336 = | 374 (1.130) | coding (334/1533 nt) | ycgB | conserved protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CGCACTGGTCATTCGGTAAAAAGTTTATCGAGACTGAACGGCTGTATAAGCACGGTCAGCAAGGACTGGCCTATGAAATCGTCATTAACTCTAACCCGTGTATCGCTTACCTGATGGAAGAGAACACCATTACCATGCAAGCGCTGGTGATGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP012306/1042461‑1042309‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atggTGTTCTCTTCCATCAGGTAAGCGATACACGGGTTAGAGTTAATGACGATTTCATAGGCCAGTCCTTGCTGACCGTGCTTATACAGCCGTTCAGTCTCGATAAACTTTTTACCGAATGACCAGTGCGGATAGTTAATTGGCATGCCGACG > AP012306/1042336‑1042484 CGCACTGGTCATTCGGTAAAAAGTTTATCGAGACTGAACGGCTGTATAAGCACGGTCAGCAAGGACTGGCCTATGAAATCGTCATTAACTCTAACCCGTGTATCGCTTACCTGATGGAAGAGAACACCATTACCATGCAAGCGCTGGTGA < 1:1348195/150‑1CGCACTGGTCATTCGGTAAAAAGTTTATCGAGACTGAACGGCTGTATAAGCACGGTCAGCAAGGACTGGCCTATGAAATCGTCATTAACTCTAACCCGTGTATCGCTTACCTGATGGAAGAGAACACCATTACCATGCAAGCGCTGGTGA > 1:4531685/1‑150 GCACTGGTCATTCGGTAAAAAGTTTATCGAGACTGAACGGCTGTATAAGCACGGTCAGCAAGGACTGGCCTATGAAATCGTCATTAACTCTAACCCGTGTATCGCTTACCTGATGGAAGAGAACACCATTACCATGCAAGCGCTGGTGAT > 2:3677427/1‑150 GCACTGGTCATTCGGTAAAAAGTTTATCGAGACTGAACGGCTGTATAAGCACGGTCAGCAAGGACTGGCCTATGAAATCGTCATTAACTCTAACCCGTGTATCGCTTACCTGATGGAAGAGAACACCATTACCATGCAAGCGCTGGTGAT < 1:3453261/150‑1 GCACTGGTCATTCGGTAAAAAGGTTATCGAGACTGAACGGCTGTATAAGCACGGTCAGCAAGGACTGGCCTATGAAATCGTCATTAACTCTAACCCGTGTATCGCTTACCTGATGGAAGAGAACACCATTACCATGCAAGCGCTGGTGAT > 2:1668102/1‑150 CACTGGTCATTCGGTAAAAAGTTTATCGAGACTGAACGGCTGTATAAGCACGGTCAGCAAGGACTGGCCTATGAAATCGTCATTAACTCTAACCCGTGTATCGCTTACCTGATGGAAGAGAACACCATTACCATGCAAGCGCTGGTGATG > 1:2910308/1‑150 CACTGGTCATTCGGTAAAAAGTTTATCGAGACTGAACGGCTGTATAAGCACGGTCAGCAAGGACTGGCCTATGAAATCGTCATTAACTCTAACCCGTGTATCGCTTACCTGATGGAAGAGAACACCATTACCATGCAAGCGCTGGTGATG > 2:2814498/1‑150 ACTGGTCATTCGGTAAAAAGTTTATCGAGACTGAACGGCTGTATAAGCACGGTCAGCAAGGACTGGCCTATGAAATCGTCATTAACTCTAACCCGTGTATCGCTTACCTGATGGAAGAGAACACCATTACCATGCAAGCGCTGGTGATGG > 1:2655687/1‑150 ACTGGTCATTCGGTAAAAAGTTTATCGAGACTGAACGGCTGTATAAGCACGGTCAGCAAGGACTGGCCTATGAAATCGTCATTAACTCTAACCCGTGTATCGCTTACCTGATGGAAGAGAACACCATTACCATGCAAGCGCTGGTGATGG < 1:3067875/150‑1 ACTGGTCATTCGGTAAAAAGTTTATCGAGACTGAACGGCTGTATAAGCACGGTCAGCAAGGACTGGCCTATGAAATCGTCATTAACTCTAACCCGTGTATCGCTTACCTGATGGAAGAGAACACCATTACCATGCAAGCGCTGGTGATGG > 2:3637221/1‑150 TGTATAAGCACGGTCAGCAAGGACTGGCCTATGAAATCGTCATTAACTCTAACCCGTGTATCGCTTACCTGATGGAAGAGAACACCATTACCATGCAAGCGCTGGTGATGGTGTTCTCTTCCATCAGGTAAGCGATACACGGGTTAGAGT > 1:1294806/1‑150 CAGCAAGGACTGGCCTATGAAATCGTCATTAACTCTAACCCGTGTATCGCTTACCTGATGGAAGAGAACACCATTACCATGCAAGCGCTGGTGATGGTGTTCTCTTCCATCAGGTAAGCGATACACGGGTTAGAGTTAATGACGATTTCA < 2:1294806/150‑1 ATGGAAGAGAACACCATTACCATGCAAGCGCTGGTGATGGTGTTCTCTTCCATCAGGTAAGCGATACACGGGTTAGAGTTAATGACGATTTCATAGGCCAGTCCTTGCTGACCGTGCTTATACAGCCGTTCA < 1:1859105/132‑1 ATGGAAGAGAACACCATTACCATGCAAGCGCTGGTGATGGTGTTCTCTTCCATCAGGTAAGCGATACACGGGTTAGAGTTAATGACGATTTCATAGGCCAGTCCTTGCTGACCGTGCTTATACAGCCGTTCA > 2:1859105/1‑132 AACACCATTACCATGCAAGCGCTGGTGATGGTGTTCTCTTCCATCAGGTAAGCGATACACGGGTTAGAGTTAATGACGATTTCATAGGCCAGTCCTTGCTGACC < 1:3232679/104‑1 AACACCATTACCATGCAAGCGCTGGTGATGGTGTTCTCTTCCATCAGGTAAGCGATACACGGGTTAGAGTTAATGACGATTTCATAGGCCAGTCCTTGCTGACC > 2:3232679/1‑104 CATTACCATGCAAGCGCTGGTGATGGTGTTCTCTTCCATCAGGTAAGCGATACACGGGTTAGAGTTAATGACGATTTCATAGGCCAGTCCTTGCTGACCGTGCTTATACAGCCGTTCAGTCTCGATAAACTTTTTACCGAATG > 2:480286/1‑143 CATTACCATGCAAGCGCTGGTGATGGTGTTCTCTTCCATCAGGTAAGCGATACACGGGTTAGAGTTAATGACGATTTCATAGGCCAGTCCTTGCTGACCGTGCTTATACAGCCGTTCAGTCTCGATAAACTTTTTACCGAATG < 1:480286/143‑1 GGTGTTCTCTTCCATCAGGTAAGCGATACACGGGTTAGAGTTAATGACGATTTCATAGGCCAGTCCTTGCTGACCGTGCTTATACAGCCGTTCAGTCTCGATAAACTTTTTACCGAATGACCAGTGCGGATAGTTAATTGGCATGCCGAC < 1:4221225/150‑1 GGTGTTCTCTTCCATCAGGTAAGCGATACACGGGTTAGAGTTAATGACGATTTCATAGGCCAGTCCTTGCTGACCGTGCTTATACAGCCGTTCAGTCTCGATAAACTTTTTACCGAATGACCAGTGCGGATAGTTAATTGGCATGCCGAC < 1:1943528/150‑1 GGTGTTCTCTTCCATCAGGTAAGCGATACACGGGTTAGAGTTAATGACGATTTCATAGGCCAGTCCTTGCTGACCGTGCTTATACAGCCGTTCAGTCTCGATAAACTTTTTACCGAATGACCAGTGCGGATAGTTAATTGGCATGCCGAC > 1:1466215/1‑150 GGTGTTCTCTTCCATCAGGTAAGCGATACACGGGTTAGAGTTAATGACGATTTCATAGGCCAGTCCTTGCTGACCGTGCTTATACAGCCGTTCAGTCTCGATAAACTTTTTACCGAATGACCAGTGCGGATAGTTAATTGGCATGCCGAC < 1:1183864/150‑1 GGTGTTCTCTTCCATCAGGTAAGCGATACACGGGTTAGAGTTAATGACGATTTCATAGGCCAGTCCTTGCTGACCGTGCTTATACAGCCGTTCAGTCTCGATAAACTTTTTACCGAATGACCAGTGCGGATAGTTAATTGGCATGCCGAC > 2:4232503/1‑150 GGTGTTCTCTTCCATCAGGTAAGCGATACACGGGTTAGAGTTAATGACGATTTCATAGGCCAGTCCTTGCTGACCGTGCTTATACAGCCGTTCAGTCTCGATAAACTTTTTACCGAATGACCAGTGCGGATAGTTAATTGGCATGCCGAC < 1:1143097/150‑1 GTGTTCTCTTCCATCAGGTAAGCGATACACGGGTTAGAGTTAATGACGATTTCATAGGCCAGTCCTTGCTGACCGTGCTTATACAGCCGTTCAGTCTCGATAAACTTTTTACCGAATGACCAGTGCGGATAGTTAATTGGCATGCCGACG > 1:827520/1‑150 GTGTTCTCTTCCATCAGGTAAGCGATACACGGGTTAGAGTTAATGACGATTTCATAGGCCAGTCCTTGCTGACCGTGCTTATACAGCCGTTCAGTCTCGATAAACTTTTTACCGAATGACCAGTGCGGATAGTTAATTGGCATGCCGACG < 2:3837542/150‑1 GTGTTCTCTTCCATCAGGTAAGCGATACACGGGTTAGAGTTAATGACGATTTCATAGGCCAGTCCTTGCTGACCGTGCTTATACAGCCGTTCAGTCTCGATAAACTTTTTACCGAATGACCAGTGCGGATAGTTAATTGGCATGCCGACG < 2:4422530/150‑1 CGCACTGGTCATTCGGTAAAAAGTTTATCGAGACTGAACGGCTGTATAAGCACGGTCAGCAAGGACTGGCCTATGAAATCGTCATTAACTCTAACCCGTGTATCGCTTACCTGATGGAAGAGAACACCATTACCATGCAAGCGCTGGTGATGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP012306/1042461‑1042309‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atggTGTTCTCTTCCATCAGGTAAGCGATACACGGGTTAGAGTTAATGACGATTTCATAGGCCAGTCCTTGCTGACCGTGCTTATACAGCCGTTCAGTCTCGATAAACTTTTTACCGAATGACCAGTGCGGATAGTTAATTGGCATGCCGACG > AP012306/1042336‑1042484 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |