Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | AP012306 | 1,421,147 | 0 | T | G | 25.4% | 513.9 / 13.0 | 244 | T79P (ACC→CCC) | ydhB | predicted DNA‑binding transcriptional regulator |
Reads supporting (aligned to +/- strand): ref base T (98/84); new base G (62/0); total (160/84) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 3.02e-14 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
Only 100 of 300 total aligned reads displayed.
TTCCTGAAAGACAAGAAGTTCGACATCATCAAAATGGCGATAAAAATCAACGATCATCTGCCGTGTACGTTCTGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTT‑GA‑GAAACCACGCTCCAGCAGCGGTCAGCTCCACATCACGGTGCCGTCGTTCAAAGAGCGGCACCGCCAGCCACTCTTCCAGCTGACGCACGGTATAGCTGACCGCAGAAGGAA > AP012306/1420998‑1421296 | ttCCTGAAAGACAAGAAGTTCGACATCATCAAAATGGCGATAAAAATCAACGATCATCTGCCGTGTACGTTCTGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGt < 2:92704/150‑1 (MQ=255) ccTGAAAGACAAGAAGTTCGACATCATCAAAATGGCGATAAAAATCAACGATCATCTGCCGTGTACGTTCTGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTgg > 1:20664/1‑149 (MQ=255) gAAAGACAAGAAGTTCGACATCATCAAAATGGCGATAAAAATCAACGATCATCTGCCGTGTACGTTCTGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGGGATCt > 1:1616113/1‑150 (MQ=255) aaaGACAAGAAGTTCGACATCATCAAAATGGCGATAAAAATCAACGATCATCTGCCGTGTACGTTCTGGCCTGAAAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTggcctg > 2:2328646/1‑145 (MQ=255) aaGACAAGAAGTTCGACATCATCAAAATGGCGATAAAAATCAACGATCATCTGCCGTGTACGTTCTGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGGGATCTGc > 1:2916764/1‑150 (MQ=255) gACAAGAAGTTCGACATCATCAAAATGGCGATAAAAATCAACGATCATCTGCCGTGTACGTTCTGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGGGATCTGcct > 2:336657/1‑148 (MQ=255) cAAGAAGTTCGACATCATCAAAATGGCGATAAAAATCAACGATCATCTGCCGTGTACGTTCTGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGGGATCTGCAttt > 2:1713140/1‑150 (MQ=255) aagaagTTCGACATCATCAAAATGGCGATAAAAATCAACGATCATCTGCCGTGTACGTTCTGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCAtttt < 2:1042120/150‑1 (MQ=255) aagaagTTCGACATCATCAAAATGGCGATAAAAATCAACGATCATCTGCCGTGTACGTTCTGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGGGGTTTGCAtttt > 2:3071241/1‑150 (MQ=255) gaagTTCGACATCATCAAAATGGCGATAAAAATCAACGATCATCTGCCGTGTACGTTCTGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCAtttttt < 2:1314991/150‑1 (MQ=255) agTTCGACATCATCAAAATGGCGATAAAAATCAACGATCATCTGCCGTGTACGTTCTGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTg < 1:892632/150‑1 (MQ=255) agTTCGACATCATCAAAATGGCGATAAAAATCAACGATCATCTGCCGTGTACGTTCTGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTg > 1:4468118/1‑150 (MQ=255) agTTCGACATCATCAAAATGGCGATAAAAATCAACGATCATCTGCCGTGTACGTTCTGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGGGATCTGCAGTTTTTTg > 1:2619705/1‑150 (MQ=255) ttCGACATCATCAAAATGGCGATAAAAATCAACGATCATCTGCCGTGTACGTTCTGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTGac < 2:384864/150‑1 (MQ=255) cGACATCATCAAAATGGCGATAAAAATCAACGATCATCTGCCGTGTACGTTCTGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGGGGTCTGCCttttttttgcaa > 2:1270721/1‑145 (MQ=255) gACATCATCAAAATGGCGATAAAAATCAACGATCATCTGCCGTGTACGTTCTGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGGTCTGCCTTTTTTTTacaac > 2:1422882/1‑150 (MQ=255) gACATCATCAAAATGGCGATAAAAATCAACGATCATCTGCCGTGTACGTTCTGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTTacaaa > 2:2573307/1‑149 (MQ=255) catcatCAAAATGGCGATAAAAATCAACGATCATCTGCCGTGTACGTTCTGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTGACAACag < 1:4231922/150‑1 (MQ=255) atcatcAAAATGGCGATAAAAATCAACGATCATCTGCCGTGTACGTTCTGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTGACAACaga < 2:4036778/150‑1 (MQ=255) atcatcAAAATGGCGATAAAAATCAACGATCATCTGCCGTGTACGTTCTGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTGACAACaga > 1:95668/1‑150 (MQ=255) atcatcAAAATGGCGATAAAAATCAACGATCATCTGCCGTGTACGTTCTGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTGACAACaga < 1:2326153/150‑1 (MQ=255) catcaAAATGGCGATAAAAATCAACGATCATCTGCCGTGTACGTTCTGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGGGATCTGCATTTTTTTTTCAACagaga > 2:1081279/1‑149 (MQ=255) atcaAAATGGCGATAAAAATCAACGATCATCTGCCGTGTACGTTCTGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTGACAACAGAgcg > 1:1176314/1‑150 (MQ=255) atcaAAATGGCGATAAAAATCAACGATCATCTGCCGTGTACGTTCTGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTGACAACAGAgcg < 2:4322347/150‑1 (MQ=255) aaaaTGGCGATAAAAATCAACGATCATCTGCCGTGTACGTTCTGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTGACAACAGAGCGccc > 1:3656008/1‑150 (MQ=255) aaaTGGCGATAAAAATCAACGATCATCTGCCGTGTACGTTCTGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTTACAACAGAGCGCCct > 2:3127186/1‑150 (MQ=255) aaaTGGCGATAAAAATCAACGATCATCTGCCGTGTACGTTCTGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTGACAACAGAGCGCCct < 1:2823126/150‑1 (MQ=255) aaaTGGCGATAAAAATCAACGATCATCTGCCGTGTACGTTCTGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGGGGTTTGCATTTTTTTTTCAACAAAGCGcccc > 2:4535344/1‑149 (MQ=255) aTGGCGATAAAAATCAACGATCATCTGCCGTGTACGTTCTGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCCTTTTTTTTACAAAAGAGCGCCcttc > 2:875634/1‑150 (MQ=255) tGGCGATAAAAATCAACGATCATCTGCCGTGTACGTTCTGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGGGGTCTGCATTTTTTTTACAACAGAGCGCCcctct > 2:4067180/1‑150 (MQ=255) gCGATAAAAATCAACGATCATCTGCCGTGTACGTTCTGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTGACAACAGAGCGCCCTTCttt < 2:1684514/150‑1 (MQ=255) cGATAAAAATCAACGATCATCTGCCGTGTACGTTCTGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGGGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTT‑g > 1:1556824/1‑150 (MQ=255) gATAAAAATCAACGATCATCTGCCGTGTACGTTCTGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGGTCTGCATTTTTTTTACAACAGAGCGCCCTTCTTT‑ga > 1:1025790/1‑150 (MQ=255) gATAAAAATCAACGATCATCTGCCGTGTACGTTCTGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATTTGCCTTTTTTTGACAACAAAGCGCCCTTCTTT‑gt > 2:3974969/1‑149 (MQ=255) gATAAAAATCAACGATCATCTGCCGTGTACGTTCTGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGGGGGCTGGATTTTTTTGACAAAAGAGGGGCCGTCTTT‑ga > 2:2753435/1‑150 (MQ=255) aaaTCAACGATCATCTGCCGTGTACGTTCTGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGGGATCTGCATTTTTTTTACAACAGAGCGCCCTTCTTT‑GA‑GAAAc > 2:1616477/1‑150 (MQ=255) aaTCAACGATCATCTGCCGTGTACGTTCTGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTT‑GA‑GAAAcc < 2:4278173/150‑1 (MQ=255) aaTCAACGATCATCTGCCGTGTACGTTCTGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTT‑GA‑GAAAcc < 2:4202893/150‑1 (MQ=255) aaCGATCATCTGCCGTGTACGTTCTGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGCTCTTGCTTTTTTTTCCAACAATGAGCCCCTCTTT‑GATGAAAcccgc > 1:268827/1‑147 (MQ=255) aCGATCATCTGCCGTGTACGTTCTGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTT‑GA‑GAAACCACGCt > 1:1190516/1‑150 (MQ=255) aCGATCATCTGCCGTGTACGTTCTGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGCGATCTGCATTTTTTTGACAACAGAGCGCCCCTCTTT‑GA‑GAAACCACGCt > 1:3512509/1‑150 (MQ=255) gATCATCTGCCGTGTACGTTCTGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTTACAACAGAGCGCCCCTCTTT‑TA‑GAAACCACGcccc > 2:4423923/1‑150 (MQ=255) gATCATCTGCCGTGTACGTTCTGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTGGCAACAAAGCGCCCCTCTTT‑GC‑GAAAACCCGcccc > 2:1791164/1‑150 (MQ=255) atcatcTGCCGTGTACGTTCTGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTT‑GA‑GAAACCACGCTCca < 2:2477664/150‑1 (MQ=255) accatcTGCCATGGACGTTCTGCCGTGACAATTTTATGCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGATGGCGGGTGATCTGCATTTTTTTGACAGCAGAGCGCGCTTCTTT‑GA‑GAAACCACGGTCca < 2:1978507/148‑1 (MQ=255) tcatcTGCCGTGTACGTTCTGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGGGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTT‑TA‑GAAACCCCGCTcccg > 1:121011/1‑148 (MQ=255) catcTGCCGTGTACGTTCTGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGGGATCTGCCTTTTTTTTACAACAGAGCGCCCCTCTTT‑GA‑GAAACCACGCTCcagc > 2:599346/1‑150 (MQ=255) tGCCGTGTACGTTCTGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTTACAACAGAGCGCCCTTCCTT‑GA‑GAAACCACGCTCCAGCAGCg > 2:2649763/1‑150 (MQ=255) tGCCGTGTACGTTCTGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGGGGTCTTCCTTTTTTTGACAACAGAGCGCCCTTCTTT‑TA‑GAAACCACGCTCCAGCAGCg > 2:514301/1‑150 (MQ=255) gCCGTGTACGTTCTGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGGGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTT‑GA‑GAAACCACGCTCCAGCAGCgg > 2:2926696/1‑150 (MQ=255) gtgtACGTTCTGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTT‑GA‑GAAACCACGCTCCAGCAGCGGTCa > 1:3187523/1‑150 (MQ=255) gtgtACGTTCTGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTGCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTT‑GA‑GAAACCACGCTCCAGCAGCGGTCa < 1:2108076/150‑1 (MQ=255) tACGTTCTGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTTACAACAGAGCGCCCTTCTTT‑GA‑GAAACCACGCTCCAGCAGCGGTCAGCt > 1:142265/1‑150 (MQ=255) cTGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTT‑GA‑GAAACCACGCTCCAGCAGCGGTCAGCTCCACAt < 1:465332/150‑1 (MQ=255) cTGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGGGGTCTGCATTTTTTTTACAACAGAGCGCCCTTCTTT‑TA‑GAAACCACGCTCCAGCAGCGGGCAGCTCCACAt > 2:3336529/1‑150 (MQ=255) ggCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTT‑GA‑GAAACCACGCTCCAGCAGCGGTCAGCTCCACATCa < 1:1886128/150‑1 (MQ=255) gCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGGGATCTGCATTTTTTTTTCAACAGAGGGCCCTTCTTT‑TT‑GGAACCACCCCCCAGCCTCGGGCGGCTCCACATcca > 2:2097072/1‑148 (MQ=255) cTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTT‑GA‑GAAACCACGCTCCAGCAGCGGTCAGCTCCACATCACgg > 1:3006543/1‑150 (MQ=255) tGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTT‑GA‑GAAACCACGCTCCAGCAGCGGTCAGCTCCACATCACGGt < 1:3802018/150‑1 (MQ=255) tGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGGGGTCTGCATTTTTTTGACAACAGAGCGCCCTTCTTT‑GA‑GAAACCACGCTCCAGCAGCGGTCAGCTCCACATCACGGt > 1:805902/1‑150 (MQ=255) tGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGGGAGCTGAAATTTTTTTAGAACCGAGCGCCCTTCTTT‑GG‑GGAAACCCGCTCCTCCACCGGACACGTCCACACCTCGGt > 2:150553/1‑150 (MQ=255) aCAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGGGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTT‑GA‑GAAACCACGCTCCAGCAGCGGTCAGCTCCACATCACGGTGc > 2:3669071/1‑150 (MQ=255) aCAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGGGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTT‑GA‑GAAACCACGCTCCAGCAGCGGTCAGCTCCACATCACCGTGc > 1:4096637/1‑150 (MQ=255) tattatCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTT‑GA‑GAAACCACGCTCCAGCAGCGGTCAGCTCCCCATCACGGTGCcgtc > 1:3910516/1‑150 (MQ=255) attatCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTTACAACAGAGCGCCCTTCTTT‑GA‑GAAACCACGCTCCAGCAGCGGTCAGCTCCACATCACCGTGCcgtcg > 1:4528694/1‑150 (MQ=255) ttatCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTT‑GA‑GAAACCACGCTCCAGCAGCGGTCAGCTCCACATCACGGTGCcgtcgt > 1:2514852/1‑150 (MQ=255) atCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCCTTTTTTTGACAACAGAGCGCCCTTCTTT‑GA‑GAAACCACGCTCCAGCAGCGGTCAGCTCCACATCACGGTGCCGTCGTTc > 1:4404334/1‑150 (MQ=255) atCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGGGATTTGCCTTTTTTTTTCAAAAGAGCGCCCTTCTTT‑TA‑GAAACCACGCCCCAACAGGGGTTAGCTCCACATCACGGGGCCGTCGTTc > 2:2747279/1‑150 (MQ=255) ccACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTGACAACAAAGCGCCCTTCTTT‑GA‑GAAACCACGCCCCAGCAGCGGGCAGCTCCACATCACCGTGCCGGCGTTCaa > 2:183959/1‑150 (MQ=255) aCTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTT‑GA‑GAAACCACGCTCCAGCAGCGGTCAGCTCCACATCACGGTGCCGTCGTTCAAag < 1:1786013/150‑1 (MQ=255) cTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGGTTTTCATTTTTTTGACAACAGAGCGCCCTTCTTT‑GT‑GAAAACCCCCTCCCGCCGCGGTCAGCTCCCCATAACGGTGGCGTCGTTCCAaga > 2:2156140/1‑150 (MQ=255) tGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTT‑GA‑GAAACCACGCTCCAGCAGCGGTCAGCTCCACATCACGGTGCCGTCGTTCAAagag < 1:632366/150‑1 (MQ=255) gCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTT‑GA‑GAAACCACGCTCCAGCAGCGGTCAGCTCCACATCACGGTGCCGTCGTTCAAAGAGc < 1:1274318/150‑1 (MQ=255) gCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGGGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTT‑GA‑GAAACCACGCTCCAGCAGCGGTCAGCTCCACATCACGGGGCCGTCGTTCAAAGAGc > 1:4342811/1‑150 (MQ=255) cGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTT‑GA‑GAAACCACGCTCCAGCAGCGGTCAGCTCCACATCACGTTGCCGTCGTTCAAAGAGCg < 2:3155679/150‑1 (MQ=255) cGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTT‑GA‑GAAACCACGCTCCAGCAGCGGTCAGCTCCACATCACGGTGCCGTCGTTCAAAGAGCg > 1:3275155/1‑150 (MQ=255) cGAGAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTT‑GA‑GAAACCACGCTCCAGCAGCGGTCAGCTCCACATCACGGTGCCGTCGTTCAAAGAGCg < 2:3005546/150‑1 (MQ=255) gATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTT‑GA‑GAAACCACGCTCCAGCAGCGGTCAGCTCCACATCACGGTGCCGTCGTTCAAAGAGCgg < 2:358/150‑1 (MQ=255) aTAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATTTGCATTTTTTTGGCAACAGAGCGCCCTTCTTT‑GG‑GAAACCACGCCCCAGCAGCGGTCAGCCCCCCCTCACCGTGCCCTCGTTCAAAGAggggg > 2:3819449/1‑149 (MQ=255) aTAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTTACAAAAGAACGCCCCTCTTT‑TA‑GAAACCACGCTCCAGCACCCGGCAACTCCCCATCCCAGGGCCGTCGTTCAAACAGCGGc > 2:1200584/1‑150 (MQ=255) aGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTT‑GA‑GAAACCACGCTCCAGCAGCGGTCAGCTCCACATCACGGTGCCGTCGTTCAAAGAGCGGCAc < 1:3072587/150‑1 (MQ=255) aGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGGGATCTGCATTTTTTTTACAACAGAGCGCCCTTCTTT‑GA‑GAAACCACGCTCCAGCAGCGGTCAGCTCCACATCACGGGGCCGTCGTTCAAAGAGCGGccc > 2:1652108/1‑148 (MQ=255) gCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTT‑GA‑GAAACCACGCTCCAGCAGCGGTCAGCTCCACATCACCGTGCCGTCGTTCAAAGAGCGGCAcc > 1:3542819/1‑150 (MQ=255) cTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGGGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTT‑GA‑GAAACCACGCTCCAGCAGCGGTCAGCTCCACATCACGGTGCCGTCGTTCAAAGAGCGGCACCg > 1:4495057/1‑150 (MQ=255) tAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTT‑GA‑GAAACCACGCTCCAGCAGCGGTCAGCTCCACATCACGGTGCCGTCGTTCAAAGAGCGGCACCgc < 2:213074/150‑1 (MQ=255) tAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGGGATCTGCCTTTTTTTTACAAAAGAGCGCCCCTCTTT‑TA‑GAAACCACCCCCCCGCAGCGGGCAGCTCCACATTACGGTGGCGGCGTTTCAAGAGGGGGCCCgc > 2:4627246/1‑150 (MQ=255) aaCTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTT‑GA‑GAAACCACGCTCCAGCAGCGGTCAGCTCCACATCACCGTGCCGTCGTTCAAAGAGCGGCACCgcc > 1:4293743/1‑150 (MQ=255) cAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGGGATCTGCATTTTTTTTACAACAAAGCGCCCCTCTTT‑GA‑GAAACCACGCTCCAGCAGCGGGCAGCTCCCCATCACCGGGCCGTCGGTCAAAGAGCGGCCCCCCCCGACACTCtttc > 2:2270166/1‑148 (MQ=255) ttCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTTACAACAGAGCGCCCTTCTTT‑GA‑GAAACCACGCTCCAGCAGCGGTCAGCTCCACATCACCGTGCCGTCGTTCAAAGAGCGGCACCGCCAGCCACTCTTCCAGCTGa > 1:2458333/1‑150 (MQ=255) ttCGCTATCTGCTGACATTGCTGGCGGGGGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTT‑GA‑GAAACCACGCTCCAGCAGCGGTCAGCTCCACATCACGGTGCCGTCGTTCAAAGAGCGGCACCCCCAGCCACTCTTCCCGCTGa > 2:1589398/1‑150 (MQ=255) aTCTGCTGACATTGCTGGCGGGTGATCTGCCTTTTTTTTACAACAGAGCGCCCTTCTTT‑GA‑GAAACCACGCCCCAGCAGCGGGCAGCTCCACCTCACCGTGCCGGCGTTCCAAGAGCGGCCCCGCCCGCCACCCTTCCCGCTGACGCACg > 2:972528/1‑150 (MQ=255) ctgctgACATTGCTGGCGGGTGATCTGCATTTTTTTTACAACAGAGCGCCCTTCTTT‑TA‑GAAACCACGCTCCAGCAGCGGTCAGCTCCACATCACGGTGCCGTCGTTCAAAGAGCGGCACCGCCAGCCACTCTTCCAGCTGACGCACGGt > 1:3346580/1‑150 (MQ=255) ctgACATTGCTGGCGGGGGGTCTGCATTTTTTTTACAACAAAGCGCCCTTCTTT‑GA‑GAAACCACGCTCCAGCAGCGGGCAGCTCCACATCACGGTGCCGTCGTTCAAAGAGCGGCCCCGCCAGCCACTCTTCCAGCTGACGCACGGtata > 2:3294688/1‑150 (MQ=255) aCATTGCTGGCGGGGGATCTGCATTTTTTTTACAAAAAAGCGCCCTTCTTT‑GA‑GAAACCACGCTCCAGCAGCGGTCAGCTCCACATCCCGGTGCCGTCGTTCAAAGAGCGGCCCCGCCAGCCCCTCTTCCCGCTGACGCCCGGGATAGCt > 2:2700042/1‑150 (MQ=255) cTGGCGGGTGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTT‑GA‑GAAACCACGCTCCAGCAGCGGTCAGCTCCACATCACGGTGCCGTCGTTCAAAGAGCGGCACCGCCAGCCACTCTTCCAGCTGACGCACGGTATAGCTGACCGc > 1:378363/1‑150 (MQ=255) cTGGCGGGTGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTT‑GA‑GAAACCACGCTCCAGCAGCGGTCAGCTCCACATCACGGTGCCGTCGTTCAAAGAGCGGCACCGCCAGCCACTCTTCCAGCTGACGCACGGTATAGCTGACCGc > 2:782503/1‑150 (MQ=255) ggCGGGTGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTT‑GA‑GAAACCACGCTCCAGCAGCGGTCAGCTCCACATCACGGTGCCGTCGTTCAAAGAGCGGCACCGCCAGCCACTCTTCCAGCTGACGCACGGTATAGCTGACCGCAg > 2:4174887/1‑150 (MQ=255) gTGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTT‑GA‑GAAACCACGCTCCAGCAGCGGTCAGCTCCACATCACGGTGCCGTCGTTCAAAGAGCGGCACCGCCAGCCACTCTTCCAGCTGACGCACGGTATAGCTGACCGCAGAAGGa > 1:2158544/1‑150 (MQ=255) tGATCTGCTTTTTTTAGAAAAAAG‑GCCCCCTTTTTTGGA‑AAAACCCCCCCCAAGCCGCGCCCAGCCCCACTCCTCTGGCCCGCCTTAAAAAGAGCGGCCCCCCCAGCCACTCTTCCAGCTGACGCACGGTATAGCTGACCGCAGAAGGaa < 2:3200309/150‑1 (MQ=255) tGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTT‑GA‑GAAACCACGCTCCAGCAGCGGTCAGCTCCACATCACGGTGCCGTCGTTCAAAGAGCGGCACCGCCAGCCACTCTTCCAGCTGACGCACGGTATAGCTGACCGCAGAAGGaa > 2:730325/1‑150 (MQ=255) | TTCCTGAAAGACAAGAAGTTCGACATCATCAAAATGGCGATAAAAATCAACGATCATCTGCCGTGTACGTTCTGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCTGGCGGGTGATCTGCATTTTTTTGACAACAGAGCGCCCTTCTTT‑GA‑GAAACCACGCTCCAGCAGCGGTCAGCTCCACATCACGGTGCCGTCGTTCAAAGAGCGGCACCGCCAGCCACTCTTCCAGCTGACGCACGGTATAGCTGACCGCAGAAGGAA > AP012306/1420998‑1421296 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |