Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | AP012306 | 800,675 | 0 | A | C | 33.0% | 529.9 / 56.7 | 274 | T192P (ACC→CCC) | lolA | chaperone for lipoproteins |
Reads supporting (aligned to +/- strand): ref base A (144/39); new base C (0/90); total (144/130) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 2.20e-41 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
Only 100 of 349 total aligned reads displayed.
GCAATGGCAATCTGAAGCAGTTCACCATTAACGTGGGACGTGATGGCACAATCCATCAGTTTAGCGCGGTGGAGCAGGACGATCAGCGCAGCAGTTATCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGC‑AGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCACAGTATATCGGCCAGCAACA > AP012306/800526‑800824 | aTGGCAATCTGAAGCAGTTCACCATTAACGTGGGACGTGATGGCACAATCCATCAGTTTAGCGCGGTGGAGCAGGACGATCAGCGCAGCAGTTATCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGC‑AGCGAAATTTACCTTCAccc < 2:1415856/150‑1 (MQ=255) tGGCAATCTGAAGCAGTTCACCATTAACGTGGGACGTGATGGCACAATCCATCAGTTTAGCGCGGTGGAGCAGGACGATCAGCGCAGCAGTTATCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGC‑AGCGAAATTTACCTTCAcccc < 2:4596232/150‑1 (MQ=255) aaTCTGAAGCAGTTCACCATTAACGTGGGACGTGATGGCACAATCCATCAGTTTAGCGCGGTGGAGCAGGACGATCAGCGCAGCAGTTATCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGC‑AGCGAAATTTACCTTCACCccgccg > 2:3557846/1‑150 (MQ=255) tCTGAAGCAGTTCACCATTAACGTGGGACGTGATGGCACAATCCATCAGTTTAGCGCGGTGGAGCAGGACGATCAGCGCAGCAGTTATCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGC‑AGCGAAATTTACCTTCCCCCCGCCGCa > 2:2162010/1‑150 (MQ=255) ggAAGCAGTTCCCCTTAAACGGGGGCCGTGAGGGCAAAACCCATCAGTTTCGCGGGGTGGAGCAGGACGACCAGCGCAGCAGTTATCAACTGAAACCCCAGCAAAAGGGGTGTGGGGTTGC‑GGCAAAATTTACCTTCCCCCCGCCGCAAg < 2:837892/149‑1 (MQ=255) ttCACCATTAACGTGGGACGTGATGGCACAATCCATCAGTTTAGCGCGGTGGAGCAGGACGATCAGCGCAGCAGTTATCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGC‑AGCGAAATTTACCTTCCCCCCGCCGCAAGGCGTCACg < 1:392216/150‑1 (MQ=255) ttCACCATTAACGTGGGACGTGATGGCACAATCCATCAGTTTAGCGCGGTGGAGCAGGACGATCAGCGCAGCAGTTATCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGC‑AGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACg > 1:4620623/1‑150 (MQ=255) cACCATTAACGTGGGACGTGATGGCACAATCCATCAGTTTAGCGCGGTGGAGCAGGACGATCAGCGCAGCAGTTATCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGC‑AGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGt > 2:556484/1‑150 (MQ=255) aaCGTGGGACGTGATGGCACAATCCATCAGTTTAGCGCGGTGGAGCAGGACGATCAGCGCAGCAGTTATCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGC‑AGCGAAATTTCCCTTCCCCCCGCCGCAAGGCGTCACGGTAgatgat < 1:451549/150‑1 (MQ=255) aaCGTGGGACGTGATGGCACAATCCATCAGTTTAGCGCGGTGGAGCAGGACGATCAGCGCAGCAGTTATCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGC‑AGCGAAATTTACCTTCCCCCCGCCGCAAGGCGTCACGGTAgatgat < 1:2902569/150‑1 (MQ=255) aaCGTGGGACGTGATGGCACAATCCATCAGTTTAGCGCGGTGGAGCAGGACGATCAGCGCAGCAGTTATCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGC‑AGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAgatgat > 1:4479296/1‑150 (MQ=255) aaCGTGGGACGTGATGGCACAATCCATCAGTTTAGCGCGGTGGAGCAGGACGATCAGCGCAGCAGTTATCAACTGAAATCCCAGCAAAATGGGGCTGGGGATGC‑AGCGAAATTTCCCTTCCCCCCGCCGCAAGGCGTCACGGTAgatgat < 2:1620517/150‑1 (MQ=255) aggggggACGTGTTGCCACAATCCAAGTTTGTCGCGGGGTGGAGCAGAACGATCAGCGAGGCACTGACCAAATTAAAGCCCAGAAAAGGGGGGTTGTGGAGGC‑AGGGAATTTTCCCTTCCCCCCGCCGCAAGGCGTCACGGTAGATGATc < 2:2345054/146‑1 (MQ=255) aCGTGGGACGTGATGGCACAATCCATCAGTTTAGCGCGGTGGAGCAGGACGATCAGCGCAGCATTTATCACCTAAAACCCCAGCAAAATGGGGCTGTGGATGC‑AGCGAAATTTCCCTTCCCCCCGCCGCAAGGCGTCACGGTAGATGATc < 2:2883683/150‑1 (MQ=255) aCGTGGGACGTGATGGCACAATCCATCAGTTTAGCGCGGTGGAGCAGGACGATCAGCGCAGCAGTTATCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGC‑AGCGAAATTTACCTTCCCCCCGCCGCAAGGCGTCACGGTAGATGATc < 1:192442/150‑1 (MQ=255) ggggaaCGTGATGGCACAATCCATCAGTTTAGCGCGGTGGAGCAGGACAATCAGCGCAGCATTTATCAACTAAAACCCCAGAAAAATGGGGTTGTGGATGA‑AGCAAAATTTCCCTTCCCCCCGCCGCAAGGCGTCACGGTAGATGATCaa < 2:4657334/145‑1 (MQ=255) gTGGGACGTGATGGCACAATCCATCAGTTTAGCGGGGTGGAGCAGGACGATCAGCGCAGCAGTTATCAACTGAAAGCCAAGCAAAAGGGGGTTGTGGATGC‑AGAGAAATTTCCCTTCCCCCCGCCGCAAGGCGTCACGGTAGATGATCaa < 2:3982037/150‑1 (MQ=255) gACGTGATGGCAGAATCCATCAGTTTAGCGCGGTGGAGCAGGACGATCAGCGCAGCAGTTATCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGC‑AGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTa > 2:4719279/1‑150 (MQ=255) cGTGATGGCACAATCCATCAGTTTAGCGCGGTGGAGCAGGACGATCAGCGCAGCAGTTATCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGC‑AGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAg > 2:3324333/1‑150 (MQ=255) gATGGCACAATCCATCAGTTTAGCGCGGTGGAGCAGGACGATCAGCGCAGCAGTTATCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGC‑AGCGAAATTTACCTTCCCCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTag < 1:1566305/150‑1 (MQ=255) aTGGCACAATCCATCAGTTTAGCGCGGTGGAGCAGGACGATCAGCGCAGCAGTTATCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGC‑AGCGAAATTTACCTTCCCCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTaga < 2:3403043/150‑1 (MQ=255) gCACAATCCATCAGTTTAGCGCGGTGGAGCAGGACGATCAGCGCAGCAGTTATCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGC‑AGCGAAATTTACCTTCCCCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGc < 1:206289/150‑1 (MQ=255) gCACAATCCATCAGTTTAGCGCGGTGGAGCAGGACGATCAGCGCAGCAGTTATCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGC‑AGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGc > 1:130390/1‑150 (MQ=255) acaATCCATCAGTTTAGCGCGGTGGAGCAGGACGATCAGCGCAGCAGTTATCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGC‑AGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCAc > 2:2584523/1‑150 (MQ=255) tCCATCAGTTTAGCGCGGTGGAGCAGGACGATCAGCGCAGCAGTTATCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGC‑AGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCtga > 1:3715054/1‑150 (MQ=255) ccATCAGTTTAGCGCGGTGGAGCAGGACGATCAGCGCAGCAGTTATCAACTGAAATCCCATCAAAATGGGGCTGTGGATGC‑AGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCtgag > 1:2006914/1‑150 (MQ=255) ccATCAGTTTAGCGCGGTGGAGCAGGACGATCAGCGCAGCAGTTATCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGC‑AGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCtgag > 2:1823335/1‑150 (MQ=255) cAGTTAAGCGGGGTGGAGCAGGACGACCAGCGCACCAGTTATCAACTGAAATCCCAGAAAAAGGGGGCTGTGGATGA‑AGCGAAATTTACCTTCCCCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCtgagtgag < 2:3796722/150‑1 (MQ=255) tttAGCGCGGTGGAGCAGGACGATCAGCGCAGCAGTTATCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGC‑AGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCaa > 2:895233/1‑150 (MQ=255) tttAGCGCGGTGGAGCAGGACGATCAGCGCAGCAGTTATCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGC‑AGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCaa > 1:260892/1‑150 (MQ=255) ttAGCGCGGTGGAGCAGGACGATCAGCGCAGCAGTTATCAACTGAAATCCCAGCAAAAGGGGGCTGGGGATGC‑AGCGAAATTTCCCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAAt < 2:3277634/150‑1 (MQ=255) cgcgGTGGAGCAGGACGATCAGCGCAGCAGTTATCAACTAAAATCCCAGCAAAAGGGGGCTGTGGAGGC‑AGCGAATTTTACCTCCCCCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGt < 2:2378854/150‑1 (MQ=255) cgcgGTGGAGCAGGACGATCAGCGCAGCAGTTATCAACTAAAACCCCAGCAAAATGGGGCTGTGGATGC‑AGCGAAATTTACCTCCCCCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGt < 2:2803749/150‑1 (MQ=255) gcgGTGGAGCAGGACGATCAGCGCAGCAGTTATCAACTGAAACCCCAGCAAAATGGGGCTGTGGATGC‑AGCGAAATTTCCCTTCCCCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTc < 2:477444/150‑1 (MQ=255) ggTGGAGCAGGACGATCAGCGCAGCAGTTATCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGC‑AGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGc > 2:1226081/1‑150 (MQ=255) tGGAGCAGGACGATCAGCGCAGCAGTTATCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGC‑AGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTc > 2:395157/1‑150 (MQ=255) tGGAGCAGGACGATCAGCGCAGCAGTTATCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGC‑AGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTc > 1:2431850/1‑150 (MQ=255) gAGCAGGACGATCAGCGCAGCAGTTATCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGC‑AGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGa > 2:4548288/1‑150 (MQ=255) gCAGGACGATCAGCGCAGCAGTTATCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGC‑AGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGAtt < 1:700255/150‑1 (MQ=255) gaGGAAGCTCTGCGTAGCGGTTATCAACATAAATCCCACAAAAGTGGGGCTGGGGAGGC‑GGCGAAATTTGCCCCCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGAttt < 2:4263913/149‑1 (MQ=255) cAGAACGACCAGCGCAGCAGTTATCAACTGAAACCCCAGCAAAATGGGGGTGTGGATGC‑AGCAAAATTTACCTCCCCCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGAttt < 2:1774466/150‑1 (MQ=255) ggACGATCAGCGCAGCAGTTATCAACTGAAATCCCAGAAAAAGGGGGCTGTGGATGC‑AGCGAAATTTACCTTCCCCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGAttttt < 1:725260/150‑1 (MQ=255) aCGATCAGCGCAGCAGTTATCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGC‑AGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTTCg > 2:2005671/1‑150 (MQ=255) aCGATCAGCGCAGCAGTTATCAACTGAAATCCCAGAAAAATGGGGCTGTGGATGC‑AGCGAAATTTCCCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTTCg < 1:3060930/150‑1 (MQ=255) cGATCAGCGCAGCAGTTATCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGC‑AGCGAAATTTACCTTCCCCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTTCgg < 2:3617022/150‑1 (MQ=255) tCAGCGCAGCAGTTATCAACTGAAACCCCAGCAAAATGGGGCTGTGGATGC‑AGCGAAATTTACCTTCCCCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGata < 1:4221158/150‑1 (MQ=255) gcgcAGAATTTATCAACGGAAACCCCAACAAATTGGGCGTGT‑GATGCGAGTAAAATTTCCCTCGCCCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGataata < 2:1912848/150‑1 (MQ=255) cgcAGCAGTTATCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGC‑AGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATAc > 2:2662468/1‑150 (MQ=255) gcagcaGTTATCAACTAAAACCCCAGCAAAAGGGGGCTGTGGATGC‑AGCGAAATTTACCTTCCCCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACt < 2:3453840/150‑1 (MQ=255) agcagTTATCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGC‑AGCGAAATTTACCTTCCCCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACttt < 1:3750894/150‑1 (MQ=255) agcagTTATAAAGTGAAATCCCAGCAAACGGGGGCTGTGGATGC‑AGCGAATTTTCCCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACttt < 2:1729005/150‑1 (MQ=255) gcagTTATCAACTGAAACCCCAGAAAAATGGGGCTGTGGATGC‑AGCGAAATTTCCCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACtttt < 2:4202610/150‑1 (MQ=255) ggTTATCATCTGAACCCCCGGAAAATGGGGGCTGGGGGTGC‑AGCGAAATTTCCCTTCCCCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCa < 2:2263871/149‑1 (MQ=255) agTTATCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGC‑AGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCa > 2:750584/1‑150 (MQ=255) agTTATCAACTGAAATCCCAGAAAAATGGGGCTGTGGATGC‑AGCAAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCa < 1:2288096/150‑1 (MQ=255) agTTATCAACTGAAATCCCAGAAAAAGGGGGCTGTGGATGC‑AGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCa < 1:2926207/150‑1 (MQ=255) gTTATCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGC‑AGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCaa > 1:1068510/1‑150 (MQ=255) ttATCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGC‑AGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAAc > 1:2220126/1‑150 (MQ=255) ttATCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGC‑AGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAAc > 2:4003718/1‑150 (MQ=255) tATCAAGTGAAATCCCAGCAAATGGGGGCTGGGGATGC‑CGCAAAATTTCCCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAAcc < 2:231598/150‑1 (MQ=255) aTCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGC‑AGCGAAATTTCCCTCCCCCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACct < 1:556682/150‑1 (MQ=255) aTCAACTAAAATCCCAGCAAAATGGGGCTGTGGATGC‑AGCGAAATTTCCCTCCCCCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACct < 2:664649/150‑1 (MQ=255) tCACCTGAAATCCCAGCAAAATGGGGCTGTGGATGC‑AGCGAAATTTCCCTTCCCCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACctc < 1:4157041/150‑1 (MQ=255) cAACTGAAATCCCAGCAAAATGGGGCTGTGGATGC‑AGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACctct < 1:1838352/150‑1 (MQ=255) cTGAAATCCCAGCAAAATGGGGCTGTGGATGC‑GGCGAAATTTACCTCCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGc < 1:914338/150‑1 (MQ=255) tGAAATCCCAGCAAAATGGGGCTGTGGATGC‑AGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGcc > 2:2993659/1‑150 (MQ=255) tGAAATCCCAGAAAAATGGGGCTGTGGATGC‑AGCAAAATTTACCTTCCCCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGcc < 2:2446277/150‑1 (MQ=255) tGAAACCCCAGCAAAATGGGGCTGTGGATGC‑AGCGAAATTTACCTTCCCCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGcc < 2:2074572/150‑1 (MQ=255) aaTCCCAGCAAAATGGGGCTGTGGATGC‑AGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCcgcg > 2:4297836/1‑150 (MQ=255) aGCAAAATGGGGTTGTGGATGC‑AGCGAAATTTACCTCCCCCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATg < 1:865094/150‑1 (MQ=255) aGCAAAATGGGGCTGTGGATGC‑AGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATg > 2:4332891/1‑150 (MQ=255) cAAAATGGGGCTGGGGATGC‑AGCGAAATTTCCCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCg < 1:1009884/150‑1 (MQ=255) aaaaaGGGGGCTGTGGATGC‑AGCAAAATTTACCTTCCCCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCg < 1:1092087/149‑1 (MQ=255) aaaaTGGGGCTGTGGATGC‑AGCGAAATTTCCCTTCCCCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCgg < 1:4710990/150‑1 (MQ=255) aaaaTGGGGCTGTGGATGC‑AGCGAAATTTCCCTCCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCgg < 1:4387881/150‑1 (MQ=255) aaaaTGGGGCTGTGGATGC‑AGCGAAATTTACCTTCCCCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCgg < 1:2860139/150‑1 (MQ=255) aaTGGGGCTGTGGATGC‑AGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGcc > 2:2122464/1‑150 (MQ=255) aTGGGGCTGTGGATGC‑AGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCa > 1:3367723/1‑150 (MQ=255) gggCTGTGGATGC‑AGGAAAATTTACCTTCCCCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGaa < 1:1712548/150‑1 (MQ=255) gCTGTGGATGC‑AGCAAAATTTACCTCCCCCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGaaaa < 2:599330/150‑1 (MQ=255) cTGTGGATGC‑AGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAAt > 2:4235094/1‑150 (MQ=255) gtgGATGC‑AGCGAAATTTACCTTCCCCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAAttt < 1:3230370/150‑1 (MQ=255) ggggATGC‑AGCGAAATTTACCTTCCCCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAAttt < 2:3102656/148‑1 (MQ=255) ggtGC‑AGCGAATTTTCCGTTACCCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGc < 1:2705992/148‑1 (MQ=255) gATGC‑AGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGc < 1:16652/150‑1 (MQ=255) gATGC‑AGCAAAATTTACCTTCCCCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGc < 2:3745659/150‑1 (MQ=255) agtGC‑GGCGAGTTTTGCCTGCGCCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGc < 1:3468676/148‑1 (MQ=255) c‑AGCGAAATTTACCTCCCCCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCACAg < 1:1438280/150‑1 (MQ=255) aGCAAAATTTCCCTCCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCACAGt < 2:370167/150‑1 (MQ=255) gAAATTTACCTTCACCCCGCCGCAAGGCTTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCACAGtata > 1:3959545/1‑150 (MQ=255) aaTTTCCCTTCCCCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCACAGTATATc < 1:1551808/150‑1 (MQ=255) tttACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCACAGTATATCgg > 2:1555270/1‑150 (MQ=255) ttACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCACAGTATATCGGc > 1:3188579/1‑150 (MQ=255) ccTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCACAGTATATCGGCCAg > 2:4166331/1‑150 (MQ=255) cTTCCCCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCACAGTATATCGGCCAGc < 2:1332156/150‑1 (MQ=255) cTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCACAGTATATCGGCCAGc > 2:4458027/1‑150 (MQ=255) cTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCACAGTATATCGGCCAGc > 2:2192388/1‑150 (MQ=255) ttCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCACAGTATATCGGCCAGCa > 1:2387205/1‑150 (MQ=255) cACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCACAGTATATCGGCCAGCAAc > 2:2484570/1‑150 (MQ=255) aCCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCACAGTATATCGGCCAGCAACa > 2:1483716/1‑150 (MQ=255) | GCAATGGCAATCTGAAGCAGTTCACCATTAACGTGGGACGTGATGGCACAATCCATCAGTTTAGCGCGGTGGAGCAGGACGATCAGCGCAGCAGTTATCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGC‑AGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCACAGTATATCGGCCAGCAACA > AP012306/800526‑800824 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |