Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | AP012306 | 3,020,670 | 0 | T | G | 32.8% | 339.9 / 18.3 | 189 | K195N (AAA→AAC) | glgC | glucose‑1‑phosphate adenylyltransferase |
Reads supporting (aligned to +/- strand): ref base T (77/50); new base G (62/0); total (139/50) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 5.95e-11 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
Only 100 of 258 total aligned reads displayed.
ATCAAATCTTTGCCAAAGTCGTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGC‑AGGTTTTTC‑AACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGATAAGCATACGCGAGTAGTCTTGCTT > AP012306/3020521‑3020819 | aTCAAATCTTTGCCAAAGTCGTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGC‑AGGt < 2:1671019/150‑1 (MQ=255) cAAATCTTTGCCAAAGTCGTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGC‑AGGttt < 2:2681043/150‑1 (MQ=255) aaaTCTTTCCCAAAGTCGTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGC‑AGGtttt < 2:1877252/150‑1 (MQ=255) aaTCTTTGCCAAAGTCGTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGC‑AGGttttt < 2:3821117/150‑1 (MQ=255) aaTCTTTGCCAAAGTCGTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGGTAGC‑AGGgtttt > 1:1586898/1‑150 (MQ=255) aTCTTTGCCAAAGTCGTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGC‑AGGTTTTTc < 1:1044910/150‑1 (MQ=255) cTTTGCCAAAGTCGTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGGTAGC‑AGGGTTTTC‑aa > 1:1270171/1‑150 (MQ=255) cTTTGCCAAAGTCGTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGGTAGC‑AGGGGTTTC‑aa > 2:194491/1‑150 (MQ=255) ttGCCAAAGTCGTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGC‑AGGTTTTTC‑AACg < 1:990478/150‑1 (MQ=255) gCCAAAGTCGTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGC‑AGGTTTTTC‑AACGaa < 2:1122605/150‑1 (MQ=255) cAAAGTCGTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGC‑AGGTTTTTC‑AACGAAtt < 2:3565206/150‑1 (MQ=255) aaaGTCGTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCAAGGTTTTTA‑ACCAAAtt > 2:4731891/1‑150 (MQ=255) aaaGTCGTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGC‑AGGGTTTTT‑TACGaacta > 2:3281470/1‑147 (MQ=255) aaaGTCGTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGC‑AGGGTTTTC‑AACGAATTc > 1:3836022/1‑150 (MQ=255) aGTCGTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGGTAGC‑AGGGTTTTC‑AACGAATTCGa > 1:573311/1‑150 (MQ=255) tCGTGGCTTAAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGC‑AGGTTTTTC‑AACGAATTCGATa < 2:3886930/150‑1 (MQ=255) tCGTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGC‑AGGTTTTTC‑AACGAATTCGATa < 1:852379/150‑1 (MQ=255) cGTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGC‑AGGTTTTTC‑AACGAATTCGATaa < 1:4198207/150‑1 (MQ=255) tGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGC‑AGGGTTTTT‑AACCAATTCGATAAtt > 2:3503209/1‑150 (MQ=255) gCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGC‑AGGTTTTTC‑AACGAATTCGATAAtttt < 1:439643/150‑1 (MQ=255) gCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGC‑AGGGTTTTT‑AACGAATTCGATAAtttt > 2:4078206/1‑150 (MQ=255) cTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGC‑AGGTTTTTC‑AACGAATTCGATAATTTTa < 2:2365819/150‑1 (MQ=255) tGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGC‑AGGTTTTTC‑AACGAATTCGATAATTTTAt < 2:195391/150‑1 (MQ=255) ggAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGGTAGC‑AGGTTTTTC‑AACGAATTCGATAATTTTTTc > 1:1157285/1‑150 (MQ=255) gAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGC‑AGGTTTTTC‑AACGAATTCGATAATTTTATCg < 2:1159820/150‑1 (MQ=255) gTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGATTGC‑CGGTTTTTT‑AACGAAATCGATAATTTTATCGtt > 2:3678516/1‑150 (MQ=255) tctcATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATGCCCATGCTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGC‑AGGTTTTTC‑AACGAATTCGATAATTTTATCGTtct < 2:1641593/150‑1 (MQ=255) tctcATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGC‑AGGTTTTTC‑AACGAATTCGATAATTTTATCGTtct < 1:3874419/150‑1 (MQ=255) ctcATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGC‑AGGTTTTTC‑AACGAATTCGATAATTTTATCGTtctc < 2:1397558/150‑1 (MQ=255) tcATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGC‑AGGTTTTTC‑AACGAATTCGATAATTTTATCGTTCtca < 2:1850235/150‑1 (MQ=255) tcATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGC‑AGGTTTTTC‑AACGAATTCGATAATTTTATCGTTCtca < 2:4616357/150‑1 (MQ=255) cATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGC‑AGGTTTTTC‑AACGAATTCGATAATTTTATCGTTCtcat < 1:2303529/150‑1 (MQ=255) cATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGC‑AGGTTTTTC‑AACGAATTCGATAATTTTATCGTTCtcat < 2:2220367/150‑1 (MQ=255) cgATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGC‑AGGTTTTTC‑AACGAATTCGATAATTTTATCGTTCTCATCAAcc < 2:4312677/150‑1 (MQ=255) cgATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGC‑AGGGTTTTC‑AACGAATTCGATAATTTTATCGTTCTCATCAAcc > 1:769327/1‑150 (MQ=255) gATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGC‑AGGTTTTTC‑AACGAATTCGATAATTTTATCGTTCTCATCAACCg > 2:1278075/1‑150 (MQ=255) gATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGC‑AGGTTTTTC‑AACGAATTCGATAATTTTATCGTTCTCATCAACCg < 1:867096/150‑1 (MQ=255) gATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGC‑AGGTTTTTC‑AACGAATTCGATAATTTTATCGTTCTCATCAACCg < 2:4474084/150‑1 (MQ=255) aTCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGGTAGC‑AGGGTTTTT‑AACGAATTCGAAAAATTTATCTTTTtcattcaacgc > 2:925085/1‑143 (MQ=255) gTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGC‑AGGTTTTTC‑AACGAATTCGATAATTTTATCGTTCTCATCAACCGCCAt > 1:4347373/1‑150 (MQ=255) gTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGGTAGC‑AGGGTTTTC‑AACGAATTCGATAATTTTATCGTTCTCATCAACCGccct > 2:451766/1‑148 (MQ=255) ttcttcCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGC‑AGGTTTTTC‑AACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAAc > 2:3065318/1‑150 (MQ=255) cttcCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGGTAGC‑AGGTTTTTC‑AACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGc > 2:2688000/1‑150 (MQ=255) ttcCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGC‑AGGTTTTTC‑AACGAATTCGATAATTTTATCGTTCTCCTCAACCGCCATAACGcc > 1:4540803/1‑150 (MQ=255) ccAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGC‑AGGTTTTTC‑AACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCaa > 1:3688069/1‑150 (MQ=255) gcagTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGC‑AGGTTTTTT‑TACAAATTCGATAATTTTATTGGTGTCATCTACCCCCATAACACCCAATg > 2:3011888/1‑150 (MQ=255) gcagTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGC‑AGGTTTTTC‑AACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATg > 1:427930/1‑150 (MQ=255) gcagTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGC‑AGGGTTTTC‑AACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATg > 2:885404/1‑150 (MQ=255) cagTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGC‑AGGTTTTTC‑AACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATGc > 1:2951665/1‑150 (MQ=255) tACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGC‑AGGGTTTTC‑AACGAATTCGATAATTTTATCGGTTTCATCAACCGCCATAACGCCCAATGCGGAGGct > 2:1904136/1‑150 (MQ=255) aCAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGC‑AGGTTTTTC‑AACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATGCGGGGGctt > 2:3653768/1‑150 (MQ=255) aCAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGC‑AGGTTTTTC‑AACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGctt > 1:2707664/1‑150 (MQ=255) aGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGC‑AGGGTTTTT‑AACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGcttct > 2:4028358/1‑150 (MQ=255) gATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGGTAGC‑AGGGTTTTC‑AACGAATTCGATAATTTTATCGTTCTCATCAAACGCCATAACGCCAAATGCGGAGGcttctt > 2:4569523/1‑150 (MQ=255) aTAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGC‑AGGTTTTTC‑AACGAATTCGATAATTTTTTCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGcttcttt > 2:4250458/1‑149 (MQ=255) aTAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGC‑AGGGTTTTC‑AACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCttcttc > 2:1736939/1‑150 (MQ=255) aTAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGATAGG‑AGGGTTTTT‑AAACAATTTGATAATTTTTTTGTTTTCCTCAAACGCCATAACACCAAATTAGGGGGgttcttt > 2:2266484/1‑149 (MQ=255) tAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGC‑AGGTTTTTT‑AAAGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATGCGGGGGCTTTTTCa > 2:3588359/1‑150 (MQ=255) tAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGC‑AGGGTTTTC‑AACGAATTCGATAATTTTATCGTTCTCATCAACCGCCCTAACGCCAAATGCGGAGGCTTCTTCa > 1:3534352/1‑150 (MQ=255) aGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGGTAGG‑AGGGTTTTT‑AACGAAATCGGTAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGGTTCTTCaa > 2:4156452/1‑150 (MQ=255) gTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGC‑AGGTTTTTC‑AACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAAt > 1:3426871/1‑150 (MQ=255) gTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGC‑AGGTTTTTC‑AACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAAt > 1:1900852/1‑150 (MQ=255) gTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGC‑AGGGTTTTC‑AACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAAt > 1:3968419/1‑150 (MQ=255) ggCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGC‑AGGTTTTTC‑AACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCgg > 1:1516296/1‑150 (MQ=255) cGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGC‑AGGGTTTTC‑AACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTa > 2:626537/1‑150 (MQ=255) cGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGGTAGC‑AGGTTTTTC‑AACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTa > 1:1671205/1‑150 (MQ=255) aGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGC‑AGGGTTTTC‑AACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCCAATGCGGAGGCTTCTTTAATCGGTACTGGCa > 2:2617120/1‑150 (MQ=255) cGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGC‑AGGTTTTTC‑AACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATAc > 2:1611247/1‑150 (MQ=255) gTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGC‑AGGGTTTTC‑AACGAATTCGATAATTTTATCGTTCTCATCAACCCCCATAACGCCAAATGCGGAGGCTTCTTCCATCGGTACTGGCATACa > 1:1966591/1‑150 (MQ=255) aaacccccATCCCCGCAAGGGTTTTGCTGGGATCTTTGGGCTTTGGGGGGGGGTTGGC‑GTTTTTTAA‑AAAAAATTAAATATTTTTCTCTTTCACAACACCCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAg < 2:3518596/145‑1 (MQ=255) aGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGC‑AGGTTTTTC‑AACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAg > 1:1190039/1‑150 (MQ=255) aGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGC‑AGGGTTTTC‑AACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAg > 1:4606095/1‑150 (MQ=255) aCCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGC‑AGGGTTTTC‑AACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAAc > 1:312458/1‑150 (MQ=255) accAGAATTTTGCCCGGCCCGCTCGGATTTGAGGGGGGGTGAGA‑AGTTTTTTA‑AACAAATTCGTTATTTTTCTCTTTCTCAAAAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGt < 2:1770063/149‑1 (MQ=255) cAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGC‑AGGGTTTTT‑AACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCCGTACTGGCATACAAGCAACGGTGCAACGTgc > 1:1399827/1‑150 (MQ=255) aTTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGC‑AGGTTTTTC‑AACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCtt > 1:490776/1‑150 (MQ=255) tttGCTCGGATCGTTCGGCATTGACGGCGGGTTAGC‑AGGTTTTTT‑AACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCttt > 2:3457359/1‑150 (MQ=255) tGCTCGGATCGTTCGGCATTGACGGCGGGTTAGC‑AGGGTTTTC‑AACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCttttt > 2:3169223/1‑150 (MQ=255) gCTCGGATCGTTCGGCATTGACGGCGGGGTAGC‑AGGTTTTTC‑AACCAATTCGATAATTTTTTTGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGGTTCTTCAATCGGTACTTGCATACAAGCAACGGCGCCACGTGCGCCCTTTTc > 2:864216/1‑150 (MQ=255) tCGGCATTGACGGCGGGTTAGC‑AGGTTTTTC‑AACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGa > 1:332177/1‑150 (MQ=255) ggCATTGACGGCGGGTTAGC‑AGGTTTTTC‑AACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGATa > 2:217447/1‑150 (MQ=255) cATTGACGGCGGGTTAGC‑AGGTTTTTC‑AACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGATAAg > 1:1060568/1‑150 (MQ=255) cATTGACGGCGGGTTAGC‑AGGTTTTTC‑AACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGATAAg > 1:4568652/1‑150 (MQ=255) cATTGACGGCGGGTTAGC‑AGGGTTTTC‑AACGAATTCGATAATTTTTTCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAACAACGGGGCAACGTGCGCCTTTTTCGACGTGGTCGATAAg > 2:63406/1‑150 (MQ=255) aTTGACGGCGGGTTAGC‑AGGTTTTTC‑AACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGATAAGc > 1:1923079/1‑150 (MQ=255) gagggggggTTAGC‑AGTTTTTTA‑AACGAATTAGATAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGATAAGCATa < 1:697168/144‑1 (MQ=255) ggcggGTTAGC‑TTTTTTTTC‑AACAAATTCTATATTTTTTTCTTTCTCACCACCCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGATAAGCATAcgc < 2:1471406/150‑1 (MQ=255) ggcggGTTAGC‑AGGTTTTTC‑AACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGATAAGCATAcgc > 1:179641/1‑150 (MQ=255) ggcggGTTAGC‑AGGTTTTTC‑AACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGATAAGCATAcgc > 1:213158/1‑150 (MQ=255) ggggTTAGT‑AGTTTTTTA‑AACAAATTCATTATTTTTTTCTTCCTCAACACCCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGATAAGCATACGCGa < 2:303930/149‑1 (MQ=255) ggTTAGC‑AGGTTTTTC‑AACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGCTCGATAAGCATACGCGagt > 1:3461781/1‑150 (MQ=255) ggTTAGA‑AGTTTTTAA‑AACGAATTCGATATTTTTATCTTTCTAACCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGATAAGCATACGCGagt < 1:265611/150‑1 (MQ=255) gTTAGC‑GGTTTTTAC‑AACGATTCCGATATTTTAATCGTCCCCACCACCCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGATAAGCATACGCGagta < 1:2256987/150‑1 (MQ=255) gTTAGC‑AGGTTTTTC‑AACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGATAAGCATACGCGagta > 2:3940533/1‑150 (MQ=255) gC‑AGGTTTTTC‑AACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGATAAGCATACGCGAGTAGTct > 1:3200122/1‑150 (MQ=255) gC‑AGGTTTTTC‑AACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGATAAGCATACGCGAGTAGTct > 1:3309649/1‑150 (MQ=255) gC‑AGGTTTTTC‑AACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGATAAGCATACGCGAGTAGTct > 2:3404439/1‑150 (MQ=255) c‑AGGTTTTTC‑AACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGATAAGCATACGCGAGTAGTctt > 2:2889792/1‑150 (MQ=255) attttttCAAACAAATTCGATATTTTTATCTTTCTCACCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGATAAGCATACGCGAGTAGTcttg < 2:2069291/148‑1 (MQ=255) gTTTTTC‑AACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGATAAGCATACGCGAGTAGTcttgct > 1:3745747/1‑150 (MQ=255) | ATCAAATCTTTGCCAAAGTCGTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGC‑AGGTTTTTC‑AACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGATAAGCATACGCGAGTAGTCTTGCTT > AP012306/3020521‑3020819 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |