Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | AP012306 | 3,188,080 | 0 | T | G | 25.8% | 426.0 / 20.5 | 183 | G177G (GGT→GGG) | sgbE | L‑ribulose‑5‑phosphate 4‑epimerase |
Reads supporting (aligned to +/- strand): ref base T (41/94); new base G (47/0); total (88/95) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 2.25e-19 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
Only 100 of 244 total aligned reads displayed.
TGCACGCGACAGATGACCGCAGAGGAGATTAACGGCGAATATGAATATCAGACCGGCGAAGTGATCATTGAAACCTTCGAAGAACGTGGCAGGAGTCCGGCACAAATCCCGGCGGTGCTGGTGCATTCT‑CACGGCCCGTTCGCATGGGGTAAAAACGCCGCCGATGCCGTGCATAACGCCGTAGTACTCGAAGAATGCGCCTATATGGGTCTATTCTCGCGCCAGCTTGCGCCGCAGCTCCCTGCGATGCAAAACGAACTGCTGGATAAGCACTACCTGCGTAAGCATGGGGCCAATGC > AP012306/3187931‑3188229 | tGCACGCGACAGATGACCGCAGAGGAGATTAACGGCGAATATGAATATCAGACCGGCGAAGTGATCATTGAAACCTTCGAAGAACGTGGCAGGAGTCCGGCACAAATCCCGGCGGTGCTGGTGCATTCT‑CACGGCCCGTTCGCATGGGGt < 2:1006540/150‑1 (MQ=255) tGCACGCGACAGATGACCGCAGAGGAGATTAACGGCGAATATGAATATCAGACCGGCGAAGTGATCATTGAAACCTTCGAAGAACGTGGCAGGAGTCCGGCACAAATCCCGGCGGTGCTGGTGCATTCT‑CACGGCCCGTTCGCATGGGGt < 2:1114443/150‑1 (MQ=255) tGCACGCGACAGATGACCGCAGAGGAGATTAACGGCGAATATGAATATCAGACCGGCGAAGTGATCATTGAAACCTTCGAAGAACGTGGCAGGAGTCCGGCACAAATCCCGGCGGTGCTGGTGCATTCT‑CACGGCCCGTTCGCATGGGGt < 2:1585761/150‑1 (MQ=255) gCACGCGACAGATGACCGCAGAGGAGATTAACGGCGAATATGAATATCAGACCGGCGAAGTGATCATTGAAACCTTCGAAGAACGTGGCAGGAGTCCGGCACAAATCCCGGCGGTGCTGGTGCATTCT‑CACGGCCCCTTCGCATGGGGTa > 1:489329/1‑150 (MQ=255) aCGCGACAGATGACCGCAGAGGAGATTAACGGCGAATATGAATATCAGACCGGCGAAGTGATCATTGAAACCTTCGAAGAACGTGGCAGGAGTCCGGCACAAATCCCGGCGGTGCTGGTGCATTCT‑CACGGCCCGTTCGCATGGGGTaaa < 2:3129513/150‑1 (MQ=255) aCGCGACAGATGACCGCAGAGGAGATTAACGGCGAATATGAATATCAGACCGGCGAAGTGATCATTGAAACCTTCGAAGAACGTGGCAGGAGTCCGGCACAAATCCCGGCGGTGCTGGTGCATTCT‑CACCGCCCCTTCGCATTGGGGaaa > 2:2823779/1‑150 (MQ=255) aCGCGACAGATGACCGCAGAGGAGATTAACGGCGAATATGAATATCAGACCGGCGAAGTGATCATTGAAACCTTCGAAGAACGTGGCAGGAGTCCGGCACAAATCCCGGCGGGGCCGGGGGATTTTCCCCGGCCCGTTGCCTGGGGGTaa > 2:2336479/1‑150 (MQ=255) cgcgACAGATGACCGCAGAGGAGATTAACGGCGAATATGAATATCAGACCGGCGAAGTGATCATTGAAACCTTCGAAGAACGTGGCAGGAGTCCGGCACAAATCCCGGCGGTGCTGGTGCATTCT‑CACGGCCCGTTCGCATGGGGTaaaa < 2:926823/150‑1 (MQ=255) gcgACAGATGACCGCAGAGGAGATTAACGGCGAATATGAATATCAGACCGGCGAAGTGATCATTGAAACCTTCGAAGAACGTGGCAGGAGTCCGGCACAAATCCCGGCGGTGCTGGTGCATTCT‑CACGGCCCGTTCGCATGGGGTaaaaa < 2:1678737/150‑1 (MQ=255) gcgACAGATGACCGCAGAGGAGATTAACGGCGAATATGAATATCAGACCGGCGAAGTGATCATTGAAACCTTCGAAGAACGTGGCAGGAGTCCGGCACAAATCCCGGCGGGGCTGGTGCATTTT‑CACCGCCCGCTTGCCTGGGGGaaaaa > 1:3626632/1‑150 (MQ=255) cgACAGATGACCGCAGAGGAGATTAACGGCGAATATGAATATCAGACCGGCGAAGTGATCATTGAAACCTTCGAAGAACGTGGCAGGAGTCCGGCACAAATCCCGGCGGTGCTGGTGCATTCT‑CACGGCCCGTTCGCATGGGGTAAAAAc < 1:2503857/150‑1 (MQ=255) cAGATGACCGCAGAGGAGATTAACGGCGAATATGAATATCAGACCGGCGAAGTGATCATTGAAACCTTCGAAGAACGTGGCAGGAGTCCGGCACAAATCCCGGCGGGACTGGTGCATTCT‑CACGGCCCGTTCGCATGGGGTAAAAAcccc > 2:528461/1‑150 (MQ=255) aTGACCGCAGAGGAGATTAACGGCGAATATGAATATCAGACCGGCGAAGTGATCATTGAAACCTTCGAAGAACGTGGCAGGAGTCCGGCACAAATCCCGGCGGTGCTGGTGCATTCT‑CACGGCCCGTTCGCATGGGGGAAAAACgccgcc > 1:1427864/1‑150 (MQ=255) aCCGAAGAGGAGATTAACGGCGAATATGAATATCAGACCGGCGAAGTGATCATTGAACCCTTCGAAGAACGTGGCAGGAGTCCGGCACAAACCCCGGGGGTGCTGGGGCATTCC‑CCCGGCCCGTTCGCATGGGGTAAAAACGCCGCCGAt < 2:3834167/150‑1 (MQ=255) ccGCAGAGGAGATTAACGGCGAATATGAATATCAGACCGGCGAAGTGATCATTGAACCCTTCGAAGAACGTGGCAGGAGTCCGGCACAAATCCCGGCGGTGCTGGTGCATTCT‑CACGGCCCGTTCGCATGGGGTAAAAACGCCGCCGATg < 2:695104/150‑1 (MQ=255) cAGAGGAGATTAACGGCGAATATGAATATCAGACCGGCGAAGTGATCATTGAAACCTTCGAAGAACGTGGCAGGAGTCCGGCACAAATCCCGGCGGTGCTGGTGCATTCT‑CACGGCCCGTTCGCATGGGGTAAAAACGCCGCCGATGCCg < 1:3962536/150‑1 (MQ=255) cAGAGGAGATTAACGGCGAATATGAATATCAGACCGGCGAAGTGATCATTGAAACCTTCGAAGAACGTGGCAGGAGTCCGGCACAAATCCCGGCGGTGCTGGTGCATTCT‑CACGGCCCGTTCGCATGGGGGAAAAACGCCGCCGATGCCg > 1:1210302/1‑150 (MQ=255) cAGAGGAGATTAACGGCGAATATGAATATCAGACCGGCGAAGTGATCATTGAAACCTTCGAAGAACGTGGCAGGAGTCCGGCACAAATCCCGGCGGTGCTGGGGCATTCT‑CACCGCCCGTTTGCCTGGGGGAAAAACCGCGCCCATGGCg > 2:1717740/1‑150 (MQ=255) agagGAGATTAACGGCGAATATGAATATCAGACCGGCGAAGTGATCATTGAAACCTTCGAAGAACGTGGCAGGAGTCCGGCACAAATCCCGGCGTTGCTGGTGCATTCT‑CACGGCCCGTTCGCATGGGGGAAAAAAGCCGCCGATGCCGt > 1:4587433/1‑150 (MQ=255) agagGAGATTAACGGCGAATATGAATATCAGACCGGCGAAGTGATCATTGAAACCTTCGAAGAACGTGGCAGGAGTCCGGCACAAATCCCGGCGGTGCTGGTGCATTCT‑CACGGCCCGTTCGCATGGGGGAAAAAAGCCGCCCATGCCgc > 1:542729/1‑149 (MQ=255) ggagATTAACGGCGAATATGAATATCAGACCGGCGAAGTGATCATTGAAACCTTCGAAGAACGTGGCAGGAGTCCGGCACAAATCCCGGCGGTGCTGGTGCATTCT‑CACCGCCCGTTCGCAATGGGGAAAAACCCCGCCCATTCCCTGcc > 1:1670203/1‑149 (MQ=255) agaTTAACGGCGAATATGAATATCAGACCGGCGAAGTGATCATTGAAACCTTCGAAGAACGTGGCAGGAGTCCGGCACAAATCCCGGCGGTGCTGGTGCATTCT‑CACGGCCCGTTCGCATGGGGTAAAAACGCCGCCGATGCCGTGCATa < 1:3122104/150‑1 (MQ=255) gaTTAACGGCGAATATGAATATCAGACCGGCGAAGTGATCATTGAAACCTTCGAAGAACGTGGCAGGAGTCCGGCACAAATCCCGGCGGTGCTGGTGCATTCT‑CACGGCCCGTTCGCATGGGGTAAAAACGCCGCCGATGCCGTGCATaa < 2:221827/150‑1 (MQ=255) aTTAACGGCGAATATGAATATCAGACCGGCGAAGTGATCATTGAAACCTTCGAAGAACGTGGCAGGAGTCCGGCACAAATCCCGGCGGTGCTGGTGCATTCT‑CACGGCCCGTTCGCATGGGGGAAAAACGCCCCCGATGCCGGGCATAAc > 1:4617509/1‑150 (MQ=255) aTTAACGGCGAATATGAATATCAGACCGGCGAAGTGATCATTGAAACCTTCGAAGAACGTGGCAGGAGTCCGGCACAAATCCCGGCGGTGCTGGTGCATTCT‑CACGGCCCCTTCGCATGGGGTAAAAACGCCGCCGATGCCGTGCATAAc > 1:4458345/1‑150 (MQ=255) tAACGGCGAATATGAATATCAGACCGGCGAAGTGATCATTGAACCCTTCGAAGAACGTGGCAGGAGTCCGGCACAAATCCCGGCGGTGCTGGTGCTTTCT‑CACGGCCCGTTCGCATGGGGTAAAAACGCCGCCGATGCCGTGCATAACGc < 2:2373856/150‑1 (MQ=255) tAACGGCGAATATGAATATCAGACCGGCGAAGTGATCATTGAAACCTTCGAAGAACGTGGCAGGAGTCCGGCACAAATCCCGGCGGTGCTGGTGCATTCT‑CACGGCCCGTTCGCATGGGGGAAAAAAGCCGCCGATGCCGTGCATAACGc > 1:860887/1‑150 (MQ=255) aCGGCGAATATGAATATCAGACCGGCGAAGTGATCATTGAAACCTTCGAAGAACGTGGCAGGAGTCCGGCACAAATCCCGGCGGTGCTGGTGCATTCT‑CACGGCCCGTTCGCATGGGGTAAAAACGCCGCCGATGCCGTGCATAACGCCg < 1:4264416/150‑1 (MQ=255) cGGCGAATATGAATATCAGACCGGCGAAGTGATCATTGAAACCTTCGAAGAACGTGGCAGGAGTCCGGCACAAATCCCGGCGGTGGTGGGGGATTCT‑CCCGGCCCCGTTGCGTGGGGGAAAAAACCCGCCGGAGCCGGGCATaaaccccg > 2:3503343/1‑144 (MQ=255) cGGCGAATATGAATATCAGACCGGCGAAGTGATCATTGAAACCTTCGAAGAACGTGGCAGGAGTCCGGCACAAATCCCGGCGGTGCTGGTGCATTCT‑CACGGCCCGTTCGCATGGGGTAAAAACGCCGCCGATGCCGTGCATAACGCCgt < 2:299265/150‑1 (MQ=255) cGGCGAATATGAATATCAGACCGGCGAAGTGATCATTGAAACCTTCGAAGAACGTGGCAGGAGTCCGGCACAAATCCCGGCGGTGCTGGTGCATTCT‑CACGGCCCGTTCGCATGGGGTAAAAACGCCGCCGATGCCGTGCATAACGCCgt < 1:2062490/150‑1 (MQ=255) cGAATATGAATATCAGACCGGCGAAGTGATCATTGAAACCTTCGAAGAACGTGGCAGGAGTCCGGCACAAATCCCGGCGGTGCTGGTGCATTCT‑CACGGCCCGTTCGCATGGGGGAAAAACGCCGCCGATGCCGTGCATAACGCCgtagt > 1:2794887/1‑150 (MQ=255) gaatatgaatatCAGACCGGCGAAGTGATCATTGAAACCTTCGAAGAACGTGGCAGGAGTCCGGCACAAATCCCGGGGGTGCTGGTGCATTCT‑CACGGCCCGTTCGCATGGGGTAAAAACGCCGCCGATGCCGTGCATAACGCCgtagta < 1:1024240/150‑1 (MQ=255) gaatatgaatatCAGACCGGCGAAGTGATCATTGAAACCTTCGAAGAACGTGGCAGGAGTCCGGCACAAATCCCGGCGGTGCTGGGGCATTCT‑CACGGCCCGTTCGCATGGGGGAAAAACGCCGCCGATGCCGTGCATAACGCCggagga > 2:448258/1‑148 (MQ=255) gaatatgaatatCAGACCGGCGAAGTGATCATTGAAACCTTCGAAGAACGTGGCAGGAGTCCGGCACAAATCCCGGCGGGGCTGGTGCATTCT‑CACGGCCCGTTCGCCTGGGGGAAAAACCCCGCCCATGCCCTGCATAAAGCCgtagta > 2:1254642/1‑150 (MQ=255) aatatgaatatCAGACCGGCGAAGTGATCATTGAAACCTTCGAAGAACGTGGCAGGAGTCCGGCACAAATCCCGGCGGTGCTGGTGCATTCT‑CACGGCCCGTTCGCATGGGGTAAAAACGCCGCCGATGCCGTGCATAACGCCGTAGTAc < 1:1533526/150‑1 (MQ=255) aatatgaatatCAGACCGGCGAAGTGATCATTGAAACCTTCGAAGAACGTGGCAGGAGTCCGGCACAAATCCCGGCGGTGCTGGTGCATTCT‑CACGGCCCGTTCGCATGGGGTAAAAACGCCGCCGATGCCGTGCATAACGCCGTAGTAc < 2:4042009/150‑1 (MQ=255) aatatgaatatCAGACCGGCGAAGTGATCATTGAAACCTTCGAAGAACGTGGCAGGAGTCCGGCACAAATCCCGGCGGTGCTGGTGCATTCT‑CACCGCCCGTTCGCCTGGGGGAAAAACGCCCCCGATGCCGTGCCTAACGCCGGAGTAc > 1:2048744/1‑150 (MQ=255) aaagtgaatcgCAGACCGGCGAAGTGACCATTGAACCCTTCGAAGAACGTGGCAGGACACTGACAAAAATCCCGGCGGTGCTGGTGCATTCT‑CACGGCCCGTGCGAATGGGGTAAAAACGCCGCCGATGCCGTGCATAACGCCGTAGTAc < 2:4835499/146‑1 (MQ=255) atgaatatCAGACCGGCGAAGTGATCATTGAAACCTTCGAAGAACGTGGCAGGAGTCCGGCACAAATCCCGGCGGTGCTGGTGCATTCT‑CACGGCCCGTTCGCATGGGGGAAAAACGCCGCCGATGCCGTGCATAACGCCGTAGTACTCg > 1:4173628/1‑150 (MQ=255) atgaatatCAGACCGGCGAAGTGATCATTGAAACCTTCGAAGAACGTGGCAGGAGTCCGGCACAAATCCCGGCGGTGCTGGTGCATTCT‑CACGGCCCGTTCGCATGGGGGAAAAACGCCGCCGATGCCGTGCATAACGCCGTAGTACTCg > 1:4633538/1‑150 (MQ=255) tgaatatCAGACCGGCGAAGTGATCATTGAAACCTTCGAAGAACGTGGCAGGAGTCCGGCACAAATCCCGGCGGTGCTGGTGCATTCT‑CACGGCCCGTTCGCATGGGGTAAAAACGCCGCCGATGCCGTGCATAACGCCGTAGTACTCga < 1:2147700/150‑1 (MQ=255) gaatatCAGACCGGCGAAGTGATCATTGAAACCTTCGAAGAACGTGGCAGGAGTCCGGCACAAATCCCGGCGGTGCTGGTGCATTCT‑CACGGCCCGTTCGCATGGGGTAAAAACGCCGCCGATGCCGTGCATAACGCCGTAGTACTCgaa < 1:3473823/150‑1 (MQ=255) aatatCAGACCGGCGAAGTGATCATTGAAACCTTCGAAGAACGTGGCAGGAGTCCGGCACAAATCCCGGCGGTGCTGGTGCATTCT‑CACGGCCCGTTCGCATGGGGGAAAAACGCCGCCGATGCCGTGCATAACGCCGTAGTACTCgaag > 1:3910066/1‑150 (MQ=255) atCAGACCGGCGAGGTGATCATTGAAACCGTCGAAGAACGTGGCGGGAGTCCGGCAAAAATCCCGGCGGTGTTGGTGAATTCT‑CACGGCCGGTTCGCAGGGGGAAAAAACGCCGCCGATGCCGTGCATAACGCCGTAGTACTCGAAGAAt < 2:4207619/150‑1 (MQ=255) aGACCGGCGAAGTGATCATTGAAACCTTCGAAGAACGTGGCAGGAGTCCGGCACAAATCCCGGCGGTGCTGGTGCATTCT‑CACGGCCCGTTCGCATGGGGGAAAAACGCCGCCGATGCCGTGCATAACGCCGTAGTAATCGAAGAATgcg > 1:531324/1‑150 (MQ=255) gACCGGCGAAGTGATCATTGAAACCTTCGAAGAACGTGGCAGGAGTCCGGCACAAATCCCGGCGGTGCTGGTGCATTCT‑CACGGCCCGTTCGCATGGGGTAAAAACGCCGCCGATGCCGTGCATAACGCCGTAGTACTCGAAGAATgcgc > 1:759580/1‑150 (MQ=255) aCCGGCGAAGTGATCATTGAAACCTTCGAAGAACGTGGCAGGAGTCCGGCACAAATCCCGGGGGTGCTGGTGCATTCT‑CACGGCCCGTTCGCATGGGGTAAAAACGCCGCCGATGCCGTGCATAACGCCGTAGTACTCGAAGAATGCGcc < 2:364205/150‑1 (MQ=255) ccGGCGAAGTGATCATTGAAACCTTCGAAGAACGTGGCAGGAGTCCGGCACAAATCCCGGCGGTGCTGGTGCATTCT‑CACGGCCCGTTCGCATGGGGTAAAAACGCCGCCGATGCCGTGCATAACGCCGTAGTACTCGAAGAATGCGCCt < 1:2579925/150‑1 (MQ=255) ccGGCGAAGTGATCAGTGAAACCTTCGAAGAACGTGGCAGGAGTCCGGCACAAACCCCGGGGGTGGTGGTGCATTCT‑CACGGCCCGTTCGCATGGGGTAAAAACGCCGCCGATGCCGTGCATAACGCCGTAGTACTCGAAGAATGCGCCt < 2:3152080/150‑1 (MQ=255) cGGCGAAGTGATCATTGAAACCTTCGAAGAACGTGGCAGGAGTCCGGCACAAATCCCGGCGGTGCTGGTGCATTCT‑CACGGCCCGTTCGCATGGGGTAAAAACGCCGCCGATGCCGTGCATAACGCCCTAGTACTCGAAGAATGCGCCta > 1:4050817/1‑150 (MQ=255) cGGCAAAATGATCATTGAAACCTTCGAAGAACGTGGCAGGAGTCCGGCACAAATCCCGGCGTTGCTGGTGCATTCT‑CACGGCCCCTTCCCAGGGGGAAAAAACGCCGCCGATGCCGTGCATAACGCCGTAGTTCTCGAAGAATGCGCCtt < 2:3420077/150‑2 (MQ=255) ggCGAAGTGATCATTGAAACCTTCGAAGAACGTGGCAGGAGGCCGGCACAAATCCCGGCGGTGGTGGTGCAGTCT‑CACGGCCCGGTCGCATGGGGGAAAAACGCCGCCGGTGCCGGGGATAAAGCCGTAGGAATCGAAGAATGGGCCcat > 2:4785607/1‑150 (MQ=255) cGAAGTGATCATTGAAACCTTCGAAGAACGTGGCAGGAGTCCGGCACAAATCCCGGCGGTGCTGGTGCATTCT‑CACGGCCCGTTCGCATTGGGGAAAAACGCCGCCGATGCCGTGCATAAAGCCGTAGTACTCGAAGAATGCGCCTatat > 1:2325006/1‑150 (MQ=255) cGAAGTGATCATTGAAACCTTCGAAGAACGTGGCAGGAGTCCGGCACAAATCCCGGCGGTGCTGGTGCATTCT‑CACGGCCCGTTCGCATGGGGTAAAAACGCCGCCGATGCCGTGCATAACGCCGTAGTACTCGAAGAATGCGCCTatat < 2:3938701/150‑1 (MQ=255) tGATCATTGAAACCTTCGAAGAACGTGGCAGGAGTCCGGCACAAATCCCGGCGGTGCTGGTGCATTCT‑CACGGCCCGTTCGCATGGGGGAAAAACGCCGCCGATGCCGTGCATAACGCCGTAGTACTCGAAGAATGCGCCTATATGGGTc > 1:4666492/1‑150 (MQ=255) tGATCATTGAAACCTTCGAAGAACGTGGCAGGAGTCCGGCACAAATCCCGGCGGGGCTGGGGCATTCT‑CACGGCCCGGTCGCATGGGGGAAAAACGCCGCCGGTGCCGGGCATAACGCCGGAGGACTCGAAGAAAGCGCCTATATggggc > 2:312079/1‑148 (MQ=255) aTCATTGAAACCTTCGAAGAACGTGGCAGGAGTCCGGCACAAATCCCGGCGGTGCTGGTGCATTCT‑CACGGCCCGTTCGCATGGGGGAAAAACGCCGCCGATGCCGTGCATAAAGCCGTAGTACTCGAAAAAAGCGCCCATATGGGGCTa > 2:1545762/1‑150 (MQ=255) cATTGAAACCTTCGAAGAACGTGGCAGGAGTCCGGCACAAATCCCGGCGGTGCTGGTGCATTCT‑CACGGCCCGGTCGCATGGGGTAAAAACGCCGCCGATGCCGTGCATAACGCCCGAGTACTCGAAGAATGCGCCTATATGGGGCTAtt > 2:4431972/1‑150 (MQ=255) aTTGAAACCTTCGAAGAACGTGGCAGGAGTCCGGCACAAATCCCGGCGGTGCTGGTGCATTCT‑CACGGCCCGTTCGCATGGGGTAAAAACGCCGCCGATGCCGTGCATAACGCCGTAGTACTCGAAGAATGCGCCTATATGGGTCTATtc < 1:2206572/150‑1 (MQ=255) gAAACCTTCGAAGAACGTGGCAGGAGTCCGGCACAAATCCCGGCGGTGCTGGTGCATTCT‑CACGGCCCGTTCGCATGGGGGAAAAACGCCGCCGATGCCGTGCATAACGCCGTAGTACTCGAAGAATGCGCCTATATGGGGCTATTCTcg > 2:2719718/1‑150 (MQ=255) cGAAGAACGTGGCAGGAGTCCGGCACAAATCCCGGCGGTGCTGGTGCATTCT‑CACGGCCCGTTCGCATGGGGGAAAAACGCCGCCGATGCCGTGCATAACGCCGTAGTACTCGAAGAATGCGCCTATATGGGTCTATTCTCGCGCCAGCt > 1:1858421/1‑150 (MQ=255) aagaaCGTGGCAGGAGTCCGGCACAAATCCCGGCGGTGCTGGTGCATTCT‑CACGGCCCGTTCGCATGGGGTAAAAACGCCGCCGATGCCGTGCATAACGCCGTAGTACTCGAAGAATGCGCCTATATGGGTCTATTCTCGCGCCAGCTTg < 1:3522084/150‑1 (MQ=255) aagaaCGTGGCAGGAGTCCGGCACAAATCCCGGCGGTGCTGGGGCATTCT‑CACGGCCCGGTCGCATGGGGGAAAAACGCCGCCCATGCCCTGCCTAACGCCGTAGGACTCGAAGAAAGCGCCCATATTGGGCTATTTTCCCGCCAGCCTg > 2:4747919/1‑150 (MQ=255) aCGTGGCAGGAGTCCGGCACAAATCCCGGCGGTGCTGGTGCATTCT‑CACGGCCCGTTCGCATGGGGGAAAAACGCCGCCGATGCCGTGCATAACGCCGTAGTACTCGAAGAATGCGCCTATATGGGTCTATTCTCGCGCCAGCTTGcgcc > 1:4486752/1‑150 (MQ=255) tGGCAGGAGTCCGGCACAAATCCCGGCGGTGCTGGGGCATTCT‑CACGGCCCGGTCGCCTGGGGGAAAAACGCCCCCGATGCCGTGCATAAAGCCGTAGTACTCGAAAAAAGGGCCCATATTGGGCTATTTTCCCGCCCGCTTTCGCCCCa > 2:4888618/1‑150 (MQ=255) ggCAGGAGTCCGGCACAAATCCCGGCGGTGCTGGTGCATTCT‑CACCGCCCGGTCGCATGGGGGAAAAAAGCCGCCGGTGCCGTGCATAACCCCGGAGTAACCCAAAAAAGCGCCCATATGGGTCCATTCTCGCCCCCGCTTTCGCCCCaa > 2:896876/1‑149 (MQ=255) gCAGGAGTCCGGCACAAATCCCGGCGGTGCTGGGGCATTCT‑CACGGCCCGTTCGCATGGGGTAAAACCGCCGCCGATGCCGTGCATAACGCCGTAGTACTCGAAGAATGCGCCTATATGGGTCTATTCTCGCGCCAGCTTGCGCCGCAGc < 2:4310380/150‑1 (MQ=255) cAGGAGTCCGGCACAAATCCCGGCGGTGCTGGTGCATTCT‑CACGGCCCGTTCGCATGGGGTAAAAACGCCGCCGATGCCGTGCATAACGCCGTAGTACTCGAAGAATGCGCCTATATGGGTCTATTCTCGCGCCAGCTTGCGCCGCAGCt < 2:2268283/150‑1 (MQ=255) aGGAGTCCGGCACAAATCCCGGCGGTGCTGGTGCATTCT‑CACGGCCCGTTCGCATGGGGTAAAAACGCCGCCGATGCCGTGCATAACGCCGTAGTACTCGAAGAATGCGCCTATATGGGTCTATTCTCGCGCCAGCTTGCGCCGCAGCTc > 1:3745212/1‑150 (MQ=255) aGGAGTCCGGCACAAATCCCGGCGGTGCTGGTGCATTCT‑CACGGCCCGTTCGCATGGGGTAAAAACGCCGCCGATGCCGTGCATAACGCCGTAGTACTCGAAGAATGCGCCTATATGGGTCTATTCTCGCGCCAGCTTGCGCCGCAGCTc < 2:2897395/150‑1 (MQ=255) ggAGTCCGGCACAAATCCCGGCGGTGCTGGTGCATTCT‑CACGGCCCGTTCGCATGGGGGAAAAACGCCGCCGATGCCGTGCATAACGCCGTAGTACTCGAAGAAAGCGCCTATATGGGGCTATTCTCGCGCCAGCTTGCGCCGCAGCTcc > 2:1878110/1‑150 (MQ=255) ggAGTCCGGCACAAATCCCGGCGGTGCTGGGGCATTCT‑CACGGCCCGGTCGCATGGGGGAAAAACGCCGCCGATGCCGTGCATAACGCCGTAGGACTCGAAGAATGCGCCTATATGGGTCTATTCTCGCGCCAGCTTGCGCCGCAGCTcc > 1:1736434/1‑150 (MQ=255) gAGTCCGGCACAAATCCCGGCGGTGCTGGTGCATTCT‑CACGGCCCGTTCGCATGGGGTAAAAACCCCGCCGATGCCGTGCATAACGCCGTAGTACTCGAAGAATGCGCCTATATGGGTCTATTCTCGCGCCCGCTTGCGCCGCAGCTccc > 2:141612/1‑150 (MQ=255) aGTCCGGCACAAATCCCGGCGGTGCTGGTGCATTCT‑CACGGCCCGTTCGCATGGGGGAAAAACGCCGCCGATGCCGTGCATAACGCCGTAGTACTCGAAGAATGCGCCTATATGGGTCTATTCTCGCGCCAGCTTGCGCCGCAGCTCCCt > 2:2627773/1‑150 (MQ=255) aGTCCGGCACAAATCCCGGCGGTGCTGGTGCATTCT‑CACGGCCCGTTCGCATGGGGGAAAAACGCCGCCGATGCCGTGCATAACGCCGTAGTACTCGAAGAATGCGCCTATATGGGTCTATTCTCGCGCCAGCTTGCGCCGCAGCTCCCt > 1:2679919/1‑150 (MQ=255) gTCCGGCACAAATCCCGGCGGTGCTGGTGCATTCT‑CACGGCCCGTTCGCATGGGGTAAAAACGCCGCCGATGCCGTGCATAACGCCGTAGTACTCGAAGAATGCGCCTATATGGGTCTATTCTCGCGCCAGCTTGCGCCGCAGCTCCCTg < 2:3013524/150‑1 (MQ=255) gTCCGGCACAAATCCCGGCGGTGCTGGTGCATTCT‑CACGGCCCGTTCGCATGGGGTAAAAACGCCGCCGATGCCGTGCATAACGCCGTAGTACTCGAAGAATGCGCCTATATGGGTCTATTCTCGCGCCAGCTTGCGCCGCAGCTCCCTg < 1:2545711/150‑1 (MQ=255) aacaAATCCCGGCGGTGCTGGTGCATGCC‑CTGGGCCCGTTCGCATGGGGTAAAAACGCCGCCGATGCCGTGCATAACGCCGTAGTACTCGAAGAATGCGCCTATATGGGTCTATTCTCGCGCCAGCTTGCGCCGCAGCTCCCTGCGATGc < 2:3245333/149‑1 (MQ=255) acaAATCCCGGCGGTGCTGGTGCATTCT‑CACGGCCCCTTCGCATGGGGGAAAAACGCCGCCGATGCCGTGCATAACCCCGTAGTACTCGAAGAATGCGCCTATATGGGTCTATTCTCGCGCCAGCTTGCGCCGCAGCCCCCTGCGATGCa > 1:1950105/1‑150 (MQ=255) caAATCCCGGCGGTGCTGGTGCATTCT‑CACGGCCCGTTCGCATGGGGGAAAAACGCCGCCGATGCCGTGCATAACGCCGTAGTACTCGAAGAATGCGCCTATATGGGTCTATTCTCGCGCCAGCTTGCGCCGCAGCTCCCTGCGATGCaa > 1:3390435/1‑150 (MQ=255) aTCCCGGCGGTGCTGGTGCATTCT‑CACGGCCCGTTCGCATGGGGGAAAAACGCCGCCGGTGCCGTGCATAACGCCGTAGTACTCGAAGAATGCGCCTATATGGGGCTATTCTCGCGCCCGCTTGCGCCGCAGCTCCCTGCGATGCaaaaa > 2:1797558/1‑149 (MQ=255) gTGCTGGTGCATTCT‑CACGGCCCGTTCGCATGGGGTAAAAACGCCGCCGATGCCGTGCATAACGCCGTAGTACTCGAAGAATGCGCCTATATGGGTCTATTCTCGCGCCAGCTTGCGCCGCAGCTCCCTGCGATGCAAAACGAActgctg < 2:1576218/150‑1 (MQ=255) cTGGTGCATTCT‑CACGGCCCGTTCGCATGGGGTAAAAACGCCGCCGATGCCGTGCATAACGCCGTAGTACTCGAAGAATGCGCCTATATGGGTCTATTCTCGCGCCAGCTTGCGCCGCAGCTCCCTGCGATGCAAAACGAACTGCTGGAt > 1:4385835/1‑150 (MQ=255) ggTGCATTCT‑CACGGCCCGTTCGCATGGGGTAAAAACGCCGCCGATGCCGTGCATAACGCCGTAGTACTCGAAGAATGCGCCTATATGGGTCTATTCTCGCGCCAGCTTGCGCCGCAGCTCCCTGCGATGCAAAACGAACTGCTGGATaa > 1:2854365/1‑150 (MQ=255) gTGCATTCT‑CACGGCCCGTTCGCATGGGGTAAAAACGCCGCCGATGCCGTGCATAACGCCGTAGTACTCGAAGAATGCGCCTATATGGGTCTATTCTCGCGCCAGCTTGCGCCGCAGCTCCCTGCGATGCAAAACGAACTGCTGGATAAg > 1:4327309/1‑150 (MQ=255) tGCATTCT‑CACGGCCCGTTCGCATGGGGTAAAAACGCCGCCGATGCCGTGCATAACGCCGTAGTACTCGAAGAATGCGCCTATATGGGTCTATTCTCGCGCCAGCTTGCGCCGCAGCTCCCTGCGATGCAAAACGAACTGCTGGATAAGc < 2:3787189/150‑1 (MQ=255) cATTCT‑CACGGCCCGTTCGCATGGGGTAAAAACGCCGCCGATGCCGTGCATAACGCCGTAGTACTCGAAGAATGCGCCTATATGGGTCTATTCTCGCGCCAGCTTGCGCCGCAGCTCCCTGCGATGCAAAACGAACTGCTGGATAAGCAc < 1:2987564/150‑1 (MQ=255) aTTCT‑CACGGCCCGTTCGCATGGGGTAAAAACGCCGCCGATGCCGTGCATAACGCCGTAGTACTCGAAGAATGCGCCTATATGGGTCTATTCTCGCGCCAGCTTGCGCCGCAGCTCCCTGCGATGCAAAACGAACTGCTGGATAAGCACt < 1:23928/150‑1 (MQ=255) ct‑cACGGCCCGTTCGCATGGGGTAAAACCGCCGCCGATGCCGTGCATAACGCCGTAGTACTCGAAGAATGCGCCTATATGGGTCTATTCTCGCGCCAGCTTGCGCCGCAGCTCCCTGCGATGCAAAACGAACTGCTGGATAAGCACTAcc < 2:3314539/150‑1 (MQ=255) ct‑cACGGCCCGTTCGCATGGGGTAAAAACGCCGCCGATGCCGTGCATAACGCCGTAGTACTCGAAGAATGCGCCTATATGGGTCTATTCTCGCGCCAGCTTGCGCCGCAGCTCCCTGCGATGCAAAACGAACTGCTGGATAAGCACTAcc > 1:4717958/1‑150 (MQ=255) gCCCGTTCGCATGGGGTAAAAGCGGCGCCGATGCCGTGCATAACGCCGTAGTACTCGAAGAATGCGCCTATATGGGTCTATTCTCGCGCCAGCTTGCGCCGCAGCTCCCTGCGATGCAAAACGAACTGCTGGATAAGCACTACCTGCGTa < 2:2012090/150‑1 (MQ=255) cGTTCGCATGGGGTAAAAACGCCGCCGATGCCGTGCATAACGCCGTAGTACTCGAAGAATGCGCCTATATGGGTCTATTCTCGCGCCAGCTTGCGCCGCAGCTCCCTGCGATGCAAAACGAACTGCTGGATAAGCACTACCTGCGTAAGc > 1:4024642/1‑150 (MQ=255) ttCGCATGGGGTAAAAACGCCGCCGATGCCGTGCATAACGCCGTAGTACTCGAAGAATGCGCCTATATGGGTCTATTCTCGCGCCAGCTTGCGCCGCAGCTCCCTGCGATGCAAAACGAACTGCTGGATAAGCACTACCTGCGTAAGCAt < 1:369105/150‑1 (MQ=255) gCATGGGGTAAAAACGCCGCCGATGCCGTGCATAACGCCGTAGTACTCGAAGAATGCGCCTATATGGGTCTATTCTCGCGCCAGCTTGCGCCGCAGCTCCCTGCGATGCAAAACGAACTGCTGGATAAGCACTACCTGCGTAAGCATggg > 1:1912792/1‑150 (MQ=255) cATGGGGTAAAAACGCCGCCGATGCCGTGCATAACGCCGTAGTACTCGAAGAATGCGCCTATATGGGTCTATTCTCGCGCCAGCTTGCGCCGCAGCTCCCTGCGATGCAAAACGAACTGCTGGATAAGCACTACCTGCGTAAGCATgggg > 2:724615/1‑150 (MQ=255) tGGGGTAAAAACGCCGCCGATGCCGTGCATAACGCCGTAGTACTCGAAGAATGCGCCTATATGGGTCTATTCTCGCGCCAGCTTGCGCCGCAGCTCCCTGCGATGCAAAACGAACTGCTGGATAAGCACTACCTGCGTAAGCATGGGGcc < 1:3298931/150‑1 (MQ=255) gTAAAAACGCCGCCGATGCCGTGCATAACGCCGTAGTACTCGAAGAATGCGCCTATATGGGTCTATTCTCGCGCCAGCTTGCGCCGCAGCTCCCTGCGATGCAAAACGAACTGCTGGATAAGCACTACCTGCGTAAGCATGGGGCCAATg > 1:694416/1‑150 (MQ=255) gTAAAAACGCCGCCGATGCCGTGCATAACGCCGTAGTACTCGAAGAATGCGCCTATATGGGTCTATTCTCGCGCCAGCTTGCGCCGCAGCTCCCTGCGATGCAAAACGAACTGCTGGATAAGCACTACCTGCGTAAGCATGGGGCCAATg > 1:4851607/1‑150 (MQ=255) gTAAAAACGCCGCCGATGCCGTGCATAACGCCGTAGTACTCGAAGAATGCGCCTATATGGGTCTATTCTCGCGCCAGCTTGCGCCGCAGCTCCCTGCGATGCAAAACGAACTGCTGGATAAGCACTACCTGCGTAAGCATGGGGCCAATg < 1:1052345/150‑1 (MQ=255) | TGCACGCGACAGATGACCGCAGAGGAGATTAACGGCGAATATGAATATCAGACCGGCGAAGTGATCATTGAAACCTTCGAAGAACGTGGCAGGAGTCCGGCACAAATCCCGGCGGTGCTGGTGCATTCT‑CACGGCCCGTTCGCATGGGGTAAAAACGCCGCCGATGCCGTGCATAACGCCGTAGTACTCGAAGAATGCGCCTATATGGGTCTATTCTCGCGCCAGCTTGCGCCGCAGCTCCCTGCGATGCAAAACGAACTGCTGGATAAGCACTACCTGCGTAAGCATGGGGCCAATGC > AP012306/3187931‑3188229 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |