| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AP012306 | 3,903,791 | 0 | A | G | 24.6% | 679.0 / 76.8 | 285 | E189G (GAA→GGA) | yjgJ | predicted transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base A (38/177); new base G (70/0); total (108/177) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.86e-39 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 416 total aligned reads displayed.
GACCATTTATGACTACATCGCCAGGCGGCATCCACAACGCGCACAATGTGTGACTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAG‑ACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAACGTT > AP012306/3903642‑3903940 | gACCATTTATGACTACATCGCCAGGCGGCATCCACAACGCGCACAATGTGTGACTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGa < 2:3520397/150‑1 (MQ=255) ccATTTATGACTACATCGCCAGGCGGCATCCACAACGCGCACAATGTGTGACTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAg > 2:3690732/1‑150 (MQ=255) aTTTATGACTACATCGCCAGGCGGCATCCACAACGCGCACAATGTGTGACTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCg < 2:1052279/150‑1 (MQ=255) tATGACTACATCGCCAGGCGGCATCCACAACGCGCACAATGTGTGACTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATa < 2:1536089/150‑1 (MQ=255) aTGACTACATCGCCAGGCGGCATCCACAACGCGCACAATGTGTGACTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAACGGTaa > 1:4141153/1‑150 (MQ=255) gACTACATCGCCAGGCGGCATCCACAACGCGCACAATGTGTGACTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGTGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGATaaaa > 1:4278412/1‑150 (MQ=255) aCTACATCGCCAGGCGGCATCCACAACGCGCACAATGTGTGACTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGGTaaaaa > 1:3184133/1‑150 (MQ=255) aCTACATCGCCAGGCGGCATCCACAACGCGCACAATGTGTGACTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATaaaaa < 1:364472/150‑1 (MQ=255) aCTACATCGCCAGGCGGCATCCACAACGCGCACAATGTGTGACTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATaaaaa < 2:2743785/150‑1 (MQ=255) tACATCGCCAGGCGGCATCCACAACGCGCACAATGTGTGACTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGGGATTAAAACt > 1:2819070/1‑150 (MQ=255) aCATCGCCAGGCGGCATCCACAACGCGCACAATGTGTGACTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTa < 1:3806202/150‑1 (MQ=255) cATCGCCAGGCGGCATCCACAACGCGCACAATGTGTGACTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGATAAAAAatat > 2:1855964/1‑150 (MQ=255) cATCGCCAGGCGGCATCCACAACGCGCACAATGTGTGACTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGATAAAAAatat > 1:3731153/1‑150 (MQ=255) cATCGCCAGGCGGCATCCACAACGCGCACAATGTGTGACTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTAt < 1:1447630/150‑1 (MQ=255) cATCGCCAGGCGGCATCCACAACGCGCACAATGTGTGACTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTAt < 2:3185176/150‑1 (MQ=255) cGCCAGGCGGCATCCACAACGCGCACAATGTGTGACTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCt < 2:1691713/150‑1 (MQ=255) ccAGGCGGCATCCACAACGCGCACAATGTGTGACTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTg < 1:271669/150‑1 (MQ=255) ccAGGCGGCATCCACAACGCGCACAATGTGTGACTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTg < 1:1582877/150‑1 (MQ=255) aGGCGGCATCCACAACGCGCACAATGTGTGACTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGATAAAAACTATTCTTgag > 1:196351/1‑150 (MQ=255) ggcggcATCCACAACGCGCACAATGTGTGACTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTgagg < 1:3375096/150‑1 (MQ=255) ggcATCCACAACGCGCACAATGTGTGACTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGGTAAAAAAAATTTTTtaggagg > 2:4402337/1‑149 (MQ=255) aTCCACAACGCGCACAATGTGTGACTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGATAAAAACTATTCTTGAGGAGGGAt > 1:931383/1‑150 (MQ=255) tCCACAACGCGCACAATGTGTGACTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATg < 2:3271876/150‑1 (MQ=255) acaACGCGCACAATGTGTGACTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCgg < 2:3069045/150‑1 (MQ=255) cgcgCACAATGTGTGACTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCt < 1:1674092/150‑1 (MQ=255) gcACAATGTGTGACTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGa < 1:1814111/150‑1 (MQ=255) acaATGTGTGACTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGAcc > 1:2905621/1‑150 (MQ=255) acaATGTGTGACTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAAAAATTCTTTAGGGGGGATGCGGGCCTTTAcc > 2:1473105/1‑150 (MQ=255) caATGTGTGACTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGAccc > 1:453561/1‑150 (MQ=255) aaTGTGTGACTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCg < 2:730415/150‑1 (MQ=255) aTGTGTGACTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGGTAAAAACTATTCTTGTGGAGTGATGGGGGCCCTGGcccca > 2:1366222/1‑148 (MQ=255) gACTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCg > 1:4161229/1‑150 (MQ=255) aTTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGATAAAAACTATTCTTTAGGAGTGATGCGGGCCCTTACCCCGAAAGCGGGgaa > 1:1406987/1‑150 (MQ=255) aTTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGaaa < 1:2620430/150‑1 (MQ=255) tttATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGGTAAAAAATATTCTTGAGGGGGGGTGCGGGGCGTGACCCGAAAGGCGGGGAAga > 2:3637587/1‑149 (MQ=255) tttATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGATAAAAAATATTCTTGAGGGGGGATGGGGGCCTTGACCCGAAAGGGGGGaaaac > 2:3881652/1‑148 (MQ=255) ttATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGATAAAAAATATTCTTTAGGAGGGGTGCGGGGCTTGACCCGAAAGGGGGGGAAgcg > 2:1618927/1‑150 (MQ=255) tATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAgcgc < 2:4090525/150‑1 (MQ=255) aTGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGGGAAAAAAAATATTCTTTAGGGGGGAAGAGGGCGCTGGTCCGAAAGGCGGGAAAGCGcc > 2:2918678/1‑150 (MQ=255) gTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGGTAAAAACAATTCTTTAGGAGGGATGCGGGCCTTGACCCGAAAGGGGGGGAAACGCCTGcc > 2:1307000/1‑150 (MQ=255) tACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGGGGTAAAAAAAATTTTTTTGGAGGGATGCGGGCCTTTGCCCGAAAGGGGGGGAAAGGCccgccg > 2:804766/1‑150 (MQ=255) tACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGATAAAAAATATTTTTTAGGAGGGATGCGGGGCCTTACCCGAAAGGCGGGGAAAAGCCTGCCg > 2:2666267/1‑150 (MQ=255) tACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCg < 1:561304/150‑1 (MQ=255) tACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCg < 1:1737747/150‑1 (MQ=255) cGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGAGAGAAAAACTATTCTTTGGGAGGGATGCGGGGCTTGACCCGCAAAGAGGGGAAAAGCCCGGCGATa > 2:3976355/1‑150 (MQ=255) cGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGGGGGATGTGGGCCCTGTCCCGAAAGGCGGGGAAAAGCCCGCCGAtc > 2:2964301/1‑149 (MQ=255) gTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGGGATGCGGGCCTTGACCCGAAAAGCGGGGAAACGCCCGCCGATaa > 1:4203502/1‑150 (MQ=255) tCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTtgtg < 1:3852718/150‑1 (MQ=255) cTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGATAAAAACTATTCTTGAGGGGGGATGCGGGCCTTGACCCGAAAGGCGGGGAAAGGCCCGCCGATAAGGTGTGa > 2:3123905/1‑150 (MQ=255) ggCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATaa < 1:485919/150‑1 (MQ=255) ttCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGGGATAAAAAATATTTTTGTGGAGTGGTGGAGGCCTTGACCCCAAAGGCGGGAAAAAGCCCGCCGGGAAGATGGGGTAAT‑ACa > 2:2791642/1‑150 (MQ=255) ttCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGAGAAAAAATATTTTTTAGGAGGGATGCGGGGCTTGACCCGAAAAGGGGGAAAACGCCCGCCGATAAGATGTGATAAA‑ACa > 2:4289326/1‑150 (MQ=255) ttCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAG‑ACa < 2:4251175/150‑1 (MQ=255) tGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAG‑ACaata < 2:301700/150‑1 (MQ=255) tGCGAAGGCACGAGAGGGGCACTCTATAGAACAACCCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAG‑ACaata < 1:1243931/150‑1 (MQ=255) gCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAG‑ACaataa < 1:1840096/150‑1 (MQ=255) cGAAGGCACGAGAGGGGCACTCTATAAAACAACTCTGTGCAACAGCTGCAATGGGGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAG‑ACaataat < 2:2293816/150‑1 (MQ=255) aaGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAG‑ACAATAATTc < 1:4423661/150‑1 (MQ=255) aGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAG‑ACAATAATTCa < 1:2770332/150‑1 (MQ=255) ggCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAAGCGGGAAAGCGCCCGCCGATAAGTTGTGATAAG‑ACAAAAAATCAc > 1:2469940/1‑150 (MQ=255) cACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGGGGGGGAAGCGATAAAAACTATTCTGGAGGAGTGATGCGGGCTTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAG‑ACAATAATTCAcgc < 1:747196/150‑1 (MQ=255) aCGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGATAAAAACTATTTTTGTGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGGTGTGATAAA‑ACAATAATTTAcgcg > 1:3532134/1‑150 (MQ=255) aCGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGATAAAAAATATTTTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGGAAGCGCCCGCCGATAAATTGTGATAAG‑ACAAAAATTTAcgcg > 2:4229656/1‑150 (MQ=255) gagaGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAG‑ACAATAATTCACGCGtt < 1:3594740/150‑1 (MQ=255) agagGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAG‑ACAATAATTCACGCGTTa < 1:3153672/150‑1 (MQ=255) ggggCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGATAAAAAATATTTTTTAGGAGGGATGCGGGCCTTGACCCGAAAGGCGGGGAAACGCCCGCCGGTAAAGTGTGGTAAA‑ACAAAAAATTACGCGtttaag > 2:2544755/1‑146 (MQ=255) gggCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGATAAAAAATATTTTTTTGGGGTGATGCGGGCCCTTGCCCGAAAGGCGGGGAAACGCCCGCCGATAAATTGTGGTAAG‑ACAATAAATTACGCGGTAAggg > 2:2369675/1‑149 (MQ=255) ggCACTCTATGAAACAGCTCGTTTCACCGGCGGCAATGGCGGGGGAGGCGATAAAACCTATTCTTGAGGAGTGATGCGGGCTTGGCCCCGAAAGGCGGAAAAGCGCCTGCCGATAAGTTGTGATAAG‑ACAATAATTCACGCGTTAAGGCt < 2:780615/150‑1 (MQ=255) tctATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAG‑ACAATAATTCACGCGTTAAGGCTAGCgg < 1:459719/150‑1 (MQ=255) tataGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGATAAAAAATATTTTTTAGGGGTGGTGCGGGGCTTTACCCGCAAAGCGGGGAAAAGCCCGCCGACAAGTTTTGGTAAGAAAAAAAATTCACCCGTAAAGGcaggggga > 2:1095688/1‑143 (MQ=255) taGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGATAAAAAAAATTTTTTAGGAGGGATGCGGGCCTTGACCAGAAAAGCGGGGAAGAGCCCGCCGATAAAATGTGATAAA‑AAAAAAAATTAAGCGGTAAAGGTAGCGGaaat > 2:643804/1‑148 (MQ=255) gAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAAAAATTCTTTAGGGGGGGTGCGGGCCTTGACCCGAAAGGCGGGGAAACGCCTGCCGCTAAGTTGTGGTAAA‑ACAAAAATTCACGCGTTAAGGCTAGCGGGAATGa > 2:1939777/1‑150 (MQ=255) aacaacTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGATAAAAAATATTTTTTTGGGGGGATGCGGGGCTTGACCCCAAAGGCGGGGGAGCGCCCGCCGGGAAATTGTGGTAAA‑ACAAAAAATTACCCGGTTAGGGTAGCgggaatggt > 2:3407617/1‑143 (MQ=255) ccaacTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAG‑ACAATAATTCACGCGTTAAGGCTAGCGGAATTGAtt < 1:83217/149‑1 (MQ=255) aacTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAG‑ACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTAt < 2:3739438/150‑1 (MQ=255) aacTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAG‑ACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTAt < 1:2140955/150‑1 (MQ=255) tctctGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGAGGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAG‑ACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATc < 1:3030532/149‑1 (MQ=255) ctGTGCAACAGCTGCAATGGCGGGGGGAGCGATAAAAACTATTTTTTAGGGGGGATGCGGGCCTTGACCCGAAAAGGGGGAAAACGCCTGCCGGTAAGTTGTGATAAG‑ACAAAAATTCACCCGGTAAAGGTAGCGGGAATGATTATtttt > 2:118457/1‑150 (MQ=255) tgtgCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAG‑ACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCtttt < 1:1077860/150‑1 (MQ=255) gtgCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAG‑ACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTc < 1:2345518/150‑1 (MQ=255) tgCAACAGCTGCAATGGCGGGGGGAGCGATAAAAAATATTTTTTAGGGGGGATGCGGGCCTTGACCCGAAAGGGGGGGAAACGCCTGCCGATAAGTTGTGATAAG‑ACAAAAATTTACGCGGTAAGGGTAGCGGAATTGATTATCtttttg > 2:3753979/1‑148 (MQ=255) cAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAG‑ACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGta < 2:4509695/150‑1 (MQ=255) aaCAGCTGCAATGGCGGGGGGAGCGATAAAAACTATTCTTGAGGAGGGATGCGGGCCTTGACCCGAAAGGCGGGAAAACGCCCGCCGATAAGGTGTGGTAAG‑ACAAAAATTCACGCGGTAAAGCTAGGGGAAATGATTTTCTTTTTGtat > 2:2471161/1‑150 (MQ=255) cAGCTGCAATGGGGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCGGAAAGGCGGAAAAGCGCCTGCCGATAAGTTGTGATAAG‑ACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATaa < 2:1984396/150‑1 (MQ=255) aGCTGCAATGGGGGGGGAAGCGATAAAAACTATTCTTGAGGGGTGATGCGGGCTTTGACCCGAAAGGCGGAAAAGCGCCTGCCGATAAGTTGTGATAAG‑ACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAAc < 2:4023007/150‑1 (MQ=255) aGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAG‑ACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAAc < 2:587649/150‑1 (MQ=255) gCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAG‑ACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACg < 1:389958/150‑1 (MQ=255) tGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAG‑ACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGAt < 1:4034059/150‑1 (MQ=255) tGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAG‑ACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGAt < 1:1003203/150‑1 (MQ=255) gCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAG‑ACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAATGATa < 1:221992/150‑1 (MQ=255) tGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAG‑ACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGaaa < 1:1190328/150‑1 (MQ=255) ggCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAG‑ACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAAt > 2:158480/1‑150 (MQ=255) gCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGGGGGCCTTGACCCAAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAG‑ACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATg < 2:1885497/150‑1 (MQ=255) gCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAG‑ACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATg > 1:4385590/1‑150 (MQ=255) gCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAG‑ACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATg < 2:2165278/150‑1 (MQ=255) gggggAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAG‑ACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGaa > 2:17962/1‑150 (MQ=255) ggggAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAG‑ACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGaaa < 1:657080/150‑1 (MQ=255) gggAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAG‑ACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAAc > 2:3570724/1‑150 (MQ=255) gggAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAG‑ACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAAc > 1:4316551/1‑150 (MQ=255) ggAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAG‑ACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAACg > 2:853039/1‑150 (MQ=255) | GACCATTTATGACTACATCGCCAGGCGGCATCCACAACGCGCACAATGTGTGACTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAG‑ACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAACGTT > AP012306/3903642‑3903940 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |