| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP012306 | = 1211471 | 305 (0.950) | 6 (0.020) | 6/292 | 19.6 | 1.9% | intergenic (+34/‑29) | ydcH/rimL | predicted protein/ribosomal‑protein‑L7/L12‑serine acetyltransferase |
| ? | AP012306 | = 1211495 | 316 (1.000) | intergenic (+58/‑5) | ydcH/rimL | predicted protein/ribosomal‑protein‑L7/L12‑serine acetyltransferase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GGAAGGTTCCGACGGTCGAGGGTACAATGCGGAAGTGGTCCGCATGAAAAAACAAAAGCTACAGTTAAAAGATGAGATGCTCAAAATCCTGCAGCAGGAGAGCGTCAAAGAGGTGTAAACTTTCCTAAGCCGCCAGCCAGGCGGCTTTTTTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP012306/1211320‑1211471‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttaTCTCCAGTCAATCCATGCAGTTGTTAAAAAAGCCGCCTGGCTGGCGGCTTAGGAAAGTTTACACCTCTTTGACGCTCTCCTGCTGCAGGATTTTGAGCATCTCATCTTTTAACTGTAGCTTTTGTTTTTTCATGCGGACCACTTCCGCA < AP012306/1211495‑1211347 GGAAGGTTCCGACGGACGAGGGTACAGTGCGGAAGTGGTCCGCATGAAAAAACAAAATCTACAGTTAAAAGATGAGATGCTCAAAATCCTGCAGCAGGAGAGCGTCAAAGAGGTGTAAACTTTCCTAAGCCGCCAGCCAGGCGGCTTTTT < 2:3600840/150‑1 GAAGGTTCCGACGGTCGAGGGTACAATGCGGAAGTGGTCCGCATGAAAAAACAAAAGCTACAGTTAAAAGATGAGATGCTCAAAATCCTGCAGCAGGAGAGCGTCAAAGAGGTGTAAACTTTCCTAAGCCGCCAGCCAGGCGGCTTTTTT < 2:4056118/150‑1 AAGGTTCCGACGGTCGAGGGTACAATGCGGAAGTGGTCCGCATGAAAAAACAAAAGCTACAGTTAAAAGATGAGATGCTCAAAATCCTGCAGCAGGAGAGCGTCAAAGAGGTGTAAACTTTCCTAAGCCGCCAGCCAGGCGGCTTTTTTA > 2:2312348/1‑150 AAGGTTCCGACGGTCGAGGGTACAATGCGGAAGTGGTCCGCATGAAAAAACAAAAGCTACAGTTAAAAGATGAGATGCTCAAAATCCTGCAGCAGGAGAGCGTCAAAGAGGTGTAAACTTTCCTAAGCCGCCAGCCAGGCGGCTTTTTTA > 2:890073/1‑150 CAAAGAGGTGTAAACTTTCCTAAGCCGCCAGCCAGGCGGCTTTTTTATCTCCAGTCAATCCATGCAGTTGTTAAAAAAGCCGCCTGGCTGGCGGCTTAGGAAAGTTTACACCTCTTTGACGCTCTCCTGCTGCAGGATTTTGAGCATCTC > 2:1107832/1‑150 AAGAGGTGTAAACTTTCCTAAGCCGCCAGCCAGGCGGCTTTTTTATCTCCAGTCAATCCATGCAGTTGTTAAAAAAGCCGCCTGGCTGGCGGCTTAGGAAAGTTTACACCTCTTTGACGCTCTCCTGCTGCAGGATTTTGAGCATCTCAT > 2:4243510/1‑150 GGTGTAAACTTTCCTAAGCCGCCAGCCAGGCGGCTTTTTTATCTCCAGTCAATCCATGCAGTTGTTAAAAAAGCCGCCTGGCTGGCGGCTTAGGAAAGTTTACACCTCTTTGACGCTCTCCTGCTGCAGGATTTTGAGCATCTCATCTTT > 2:2126695/1‑150 CCAGCCAGGCGGCTTTTTTATCTCCAGTCAATCCATGCAGTTGTTAAAAAAGCCGCCTGGCTGGCGGCTTAGGAAAGTTTACACCTCTTTGACGCTCTCCTGCTGCAGGATTTTGAGCATCTCATCTTTTAACTGTAGCTTTTGTTTTTT < 1:2126695/150‑1 GCCAGGCGGCTTTTTTATCTCCAGTCAATCCATGCAGTTGTTAAAAAAGCCGCCTGGCTGGCGGCTTAGGAAAGTTTACACCTCTTTGACGCTCTCCTGCTGCAGGATTTTGAGCATCTCATCTTTTAACTGTAGCTTTTGTTTTTTCAT < 1:1107832/150‑1 CAGGCGGCTTTTTTATCTCCAGTCAATCCATGCAGTTGTTAAAAAAGCCGCCTGGCTGGCGGCTTAGGAAAGTTTACACCTCTTTGACGCTCTCCTGCTGCAGGATTTTGAGCATCTCATCTTTTAACTGTAGCTTTTGTTTTTTCATGC < 1:4243510/150‑1 TATCTCCAGTCAATCCATGCAGTTGTTAAAAAAGCCGCCTGGCTGGCGGCTTAGGAAAGTTTACACCTCTTTGACGCTCTCCTGCTGCAGGATTTTGAGCATCTCATCTTTTAACTGTAGCTTTTGTTTTTTCATGCGGACCACTTCCGC < 2:2251943/150‑1 TATCTCCAGTCAATCCATGCAGTTGTTAAAAAAGCCGCCTGGCTGGCGGCTTAGGAAAGTTTACACCTCTTTGACGCTCTCCTGCTGCAGGATTTTGAGCATCTCATCTTTTAACTGTAGCTTTTGTTTTTTCATGCGGACCACTTCCGC > 2:2549049/1‑150 TATCTCCAGTCAATCCATGCAGTTGTTAAAAAAGCCGCCTGGCTGGCGGCTTAGGAAAGTTTACACCTCTTTGACGCTCTCCTGCTGCAGGATTTTGAGCATCTCATCTTTTAACTGTAGCTTTTGTTTTTTCATGCGGACCACTTCCGC < 2:3335595/150‑1 ATCTCCAGTCAATCCATGCAGTTGTTAAAAAAGCCGCCTGGCTGGCGGCTTAGGAAAGTTTACACCTCTTTGACGCTCTCCTGCTGCAGGATTTTGAGCATCTCATCTTTTAACTGTAGCTTTTGTTTTTTCATGCGGACCACTTCCGCA > 1:478698/1‑150 ATCTCCAGTCAATCCATGCAGTTGTTAAAAAAGCCGCCTGGCTGGCGGCTTAGGAAAGTTTACACCTCTTTGACGCTCTCCTGCTGCAGGATTTTGAGCATCTCATCTTTTAACTGTAGCTTTTGTTTTTTCATGCGGACCACTTCCGCA < 1:991143/150‑1 GGAAGGTTCCGACGGTCGAGGGTACAATGCGGAAGTGGTCCGCATGAAAAAACAAAAGCTACAGTTAAAAGATGAGATGCTCAAAATCCTGCAGCAGGAGAGCGTCAAAGAGGTGTAAACTTTCCTAAGCCGCCAGCCAGGCGGCTTTTTTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP012306/1211320‑1211471‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttaTCTCCAGTCAATCCATGCAGTTGTTAAAAAAGCCGCCTGGCTGGCGGCTTAGGAAAGTTTACACCTCTTTGACGCTCTCCTGCTGCAGGATTTTGAGCATCTCATCTTTTAACTGTAGCTTTTGTTTTTTCATGCGGACCACTTCCGCA < AP012306/1211495‑1211347 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |