Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | AP012306 | 202,417 | 0 | T | G | 25.8% | 522.5 / 34.3 | 230 | V409G (GTA→GGA) | tilS | tRNA(Ile)‑lysidine synthetase |
Reads supporting (aligned to +/- strand): ref base T (74/96); new base G (59/0); total (134/96) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.05e-17 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
Only 100 of 279 total aligned reads displayed.
TTCAAAGCGCCAGGATTGCTGCATATTGTCGGGCGTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTG‑AAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCG > AP012306/202269‑202566 | aaaGCGCCAGGATTGCTGCATATTGTCGGGCGTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGCAGGGGGAttt > 1:3355261/1‑150 (MQ=255) aGCGCCAGGATTGCTGCATATTGTCGGGCGTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGGCGGGGGAttttt > 2:34806/1‑148 (MQ=255) gcCAGGATTGCTGCATATTGTCGGGCGTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGCAGGGGGATTTGTGAc > 1:1014780/1‑150 (MQ=255) aGGATTGCTGCATATTGTCGGGCGTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGGAGGGGGATTTTTGGCGCa > 2:1893391/1‑150 (MQ=255) aGGATTGCTGCATATTGTCGGGCGTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGCAGGGGTATTTGTGACGCa < 2:3714938/150‑1 (MQ=255) ggATTGCTGCATATTGTCGGGCGTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGCAGGGGTATTTGTGACGCaa < 1:3011489/150‑1 (MQ=255) gctgcATATTGTCGGGCGTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGGAGGGGGATTTTTGACGCaaaaaag > 2:1589986/1‑148 (MQ=255) gctgcATATTGTCGGGCGTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGCAGGGGGATTTTTGACGCCAGAAgg > 1:3128698/1‑150 (MQ=255) tgcATATTGTCGGGCGTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGCAGGGGGATTTGTGACGCAAGAAGgtg > 1:2147585/1‑150 (MQ=255) gcATATTGTCGGGCGTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGCAGGGGGGTTTTTGGCGCCAAAAggggg > 2:1338892/1‑147 (MQ=255) cATATTGTCGGGCGTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGtgtg < 2:4116545/150‑1 (MQ=255) atatTGTCGGGCGTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGCAGGGGGATTTGTGACGCCAGAAGGTGTgg > 1:2599656/1‑150 (MQ=255) tatTGTCGGGCGTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGGAGGGGGATTTTTGGCGCCAGAAGGGGTggg > 2:2605810/1‑149 (MQ=255) tatTGTCGGGCGTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGc > 1:2254010/1‑150 (MQ=255) tGTCGGGCGTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTG‑a < 2:1422739/150‑1 (MQ=255) tCGGGCGTAACGGCGGACGCAAGCTAAAGAAAATCTGGCAAGAGCTGGGGGGGCCGCCGTGGCTACGGGACACCACGGCAGTGCTGTTTTATGGCGAAACGCTGGTTGCGGCGGCAGGGGGGTTTGTGAGGGAAGAAGGGGGGGcgggag > 2:2586930/1‑145 (MQ=255) cGGGCGTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGCCGGGGGATTTGTGACGCAAGAAGGTGTGGCTG‑AAgg > 1:838834/1‑150 (MQ=255) gggCGTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGCAGGGGGATTTGTGACGCAAGAAGGTGTGGCTG‑AAGGt > 1:276042/1‑150 (MQ=255) ggcggACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGCAGGGGGATTTGTGACGCAAGAAGGTGTGGCTG‑AAGGTGAGAATGGc > 1:1778333/1‑150 (MQ=255) ggACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTG‑AAGGTGAGAATGGCGTa > 1:4128561/1‑150 (MQ=255) gACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTG‑AAGGGGAGAATGGCGTaa > 1:946277/1‑150 (MQ=255) aCGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTG‑AAGGTGAGAATGGCGTAAg > 2:2893398/1‑150 (MQ=255) aCGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTG‑AAGGTGAGAATGGCGTAAg > 1:1424534/1‑150 (MQ=255) tAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTG‑AAGGTGAGAATGGCGTAAGttt > 1:1496179/1‑150 (MQ=255) tAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGCAGGGGGATTTGTGACGCAAGAAGGTGTGGCTG‑AAGGGGAGAATGGCGTAAGttt > 1:2278464/1‑150 (MQ=255) aaGCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTG‑AAGGTGAGAATGGCGTAAGtttt < 1:606630/150‑1 (MQ=255) aaGCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGCAGGGGGATTTGTGACGCAAGAAGGTGTGGCTG‑AAGGGGAGAATGGCGTAAGtttt > 2:1717671/1‑150 (MQ=255) aGCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGCAGGGGGATTTGTGACGCAAGAAGGTGTGGCTG‑AAGGTGAGAATGGCGTAAGTTTTg > 1:2034011/1‑150 (MQ=255) gCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTG‑AAGGTGAGAATGGCGTAAGTTTTGt < 1:391221/150‑1 (MQ=255) cTAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGCAGGGGTATTTGTGGCGCAAGAAGGTGTGGCTG‑AAGGTGAGAATGGCGTAAGTTTTGTc > 1:1170910/1‑150 (MQ=255) tAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGCCGGGGGATTTGTGGCGCAAGAAGGTGTGGCTG‑AAGGGGAGAATGGCGTAAGTTTTGTCt > 2:4217840/1‑150 (MQ=255) tAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTG‑AAGGTGAGAATGGCGTAAGTTTTGTCt < 1:188112/150‑1 (MQ=255) tAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTG‑AAGGTGAGAATGGCGTAAGTTTTGTCt > 1:4073009/1‑150 (MQ=255) tAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTG‑AAGGTGAGAATGGCGTAAGTTTTGTCt < 2:787261/150‑1 (MQ=255) aaGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTG‑AAGGTGAGAATGGCGTAAGTTTTGTCTgg < 2:965450/150‑1 (MQ=255) gAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTG‑AAGGTGAGAATGGCGTAAGTTTTGTCTGGCa < 2:1819076/150‑1 (MQ=255) aaaaTCTGGCAAGAGCTGGGCGTGCCGACGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTG‑AAGGGGAGAATGGCGTAAGTTTTGTCTGGCAg > 2:2399369/1‑150 (MQ=255) aTCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTG‑AAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGaaa < 2:894404/150‑1 (MQ=255) aTCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTG‑AAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGaaa < 2:2185206/150‑1 (MQ=255) tCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGCCGGGGTATTTGTGACGCAAAAAGGTGTGGCCGTAAGGGGGGAA‑GGCGTAAGGTTTGTCTTGGCGaaaa > 2:1020083/1‑150 (MQ=255) tCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTG‑AAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGaaaa < 1:2460655/150‑1 (MQ=255) tCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTG‑AAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGaaaa > 1:3801469/1‑150 (MQ=255) tGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTG‑AAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACg < 1:2577316/150‑1 (MQ=255) tGGCAAGAGCAGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTG‑AAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACg < 1:3046622/150‑1 (MQ=255) ggCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGCAGGGGGATTTGTGACGCAAGAAGGTGTGGCTG‑AAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGc > 2:1639027/1‑150 (MQ=255) ggCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGCAGGGGGATTTGTGACGCAAGAAGGTGTGGCTG‑AAGGGGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGc > 2:4167832/1‑150 (MQ=255) gCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTG‑AAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCt < 1:265400/150‑1 (MQ=255) cAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGCCGGGAGATTTGTGACGCAAGAAGGGGTGGCTG‑AAGGTGGGCATGGGGTAAGTTTTGTCTGGCAGCAAACGCtt > 2:2728097/1‑150 (MQ=255) cAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTG‑AAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCtt < 2:3607766/150‑1 (MQ=255) aaGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTG‑AAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTa < 1:2970915/150‑1 (MQ=255) agagCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGCAGGGGGATTTGTGACGCAAGAAGGTGTGGCTG‑AAGGGGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAg > 2:1060238/1‑150 (MQ=255) cTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTG‑AAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTaa > 1:1266120/1‑150 (MQ=255) cTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTG‑AAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTaa < 1:105964/150‑1 (MQ=255) tGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGCCGGGGGATTTGTGAAGCAAGGAGGTGTGGCTG‑GAGGGGAGAAAAGGGTGAGTTTTGTCTGGGAGGAAAAGCTTGGTTAAg > 2:1111404/1‑150 (MQ=255) ggCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGCAGGGGGATTTGTGACGCAAGAAGGTGTGGCTG‑AAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTg > 1:3169346/1‑150 (MQ=255) ggCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGCAGGGGGATTTGTGACGCAAGAAGGGGTGGCTG‑AAGGGGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTg > 2:2990441/1‑150 (MQ=255) gTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTG‑AAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAActtacgc < 2:1946181/140‑7 (MQ=255) gTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTG‑AAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGaaa < 1:2210984/150‑1 (MQ=255) gccgccGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTG‑AAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGc < 2:1403019/150‑1 (MQ=255) gccgccGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTG‑AAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGc > 1:3938294/1‑150 (MQ=255) gccgccGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTG‑AAGGTGAGAATGGCGTAAGATTTGTCTGGCAGAAAACGCTTAGTTAAGTGaaaac > 1:790664/1‑148 (MQ=255) ggCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTG‑AAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAg > 1:2860137/1‑150 (MQ=255) ggCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTG‑AAGGTGAGAATGGCGTAAGGTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGGTAAg > 1:3420292/1‑150 (MQ=255) gTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTG‑GAGGTGAGAATGGCGTAAGTTTTTTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAAACGCAt > 2:37983/1‑150 (MQ=255) gACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTG‑AAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCa > 1:1971586/1‑150 (MQ=255) accacGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTG‑AAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAAc < 2:2471001/150‑1 (MQ=255) ccacGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGCAGGGGGATTTGTGACGCAAGAAGGTGTGGCTG‑AAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAACCGGATAAGAAGCATCAAACg > 2:3409773/1‑150 (MQ=255) acGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGCAGGGGGATTTGTGACGCAAGAAGGTGTGGCTG‑AAGGTGAGAATGGCGGAAGGTTTGTCTGGCAGAAAACGCTTTGTTAAGTGAAAGCCGGGTAAGGCGCATCAAACGTc > 2:1221812/1‑150 (MQ=255) gCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTG‑AAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGc < 1:4199368/150‑1 (MQ=255) gCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGCAGGGGGATTTGTGACGCAAGAAGGTGTGGCTG‑AAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGc > 1:1311579/1‑150 (MQ=255) ccACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTG‑AAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAACCGGATAAGACGCATCAAACGTCGCa > 1:3464561/1‑150 (MQ=255) ccACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGCAGGGGGATTTGTGACGCAAGAAGGTGTGGCTG‑GAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCa > 2:3894715/1‑150 (MQ=255) ctgctgTTTTATGGCGAAACGCTGATTGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTG‑AAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATcc < 2:3742717/150‑1 (MQ=255) ctgctgTTTTATGGCGAAACGCTGATTGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTG‑AAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATcc > 2:2504785/1‑150 (MQ=255) ctgctgTTTTATGGCGAAACGCTGATTGCGGCGGCAGGGGGATTTGTGACGCAAGAAGGGGTGGCTG‑AAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATcc > 2:1973599/1‑150 (MQ=255) tgctgTTTTATGGCGAAACGCTGATTGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTG‑AAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCg < 1:454435/150‑1 (MQ=255) tttATGGCGAAACGCTGATTGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTG‑AAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGaaa < 2:435903/150‑1 (MQ=255) tATGGCGAAACGCTGATTGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTG‑AAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGt < 1:3698802/150‑1 (MQ=255) aTGGCGAAACGCTGATTGCGGCGGCAGGGGGATTTGTGACGCAAGAAGGTGTGGCTG‑AAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTc > 2:3959200/1‑150 (MQ=255) gCGAAACGCTGATTGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTG‑AAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAAt > 2:1136654/1‑150 (MQ=255) gCGAAACGCTGATTGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTG‑AAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAAt < 2:3500359/150‑1 (MQ=255) cGAAACGCTGATTGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTG‑AAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATc < 1:1031907/150‑1 (MQ=255) gAAACGCTGATTGCGGCGGCAGGGGGATTTGTGACGCAAGAAGGTGTGGCTG‑AAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCa > 2:3538484/1‑150 (MQ=255) aaCGCTGATTGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTG‑AAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAgg < 2:671903/150‑1 (MQ=255) aCGCTGATTGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTG‑AAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGa < 2:1537438/150‑1 (MQ=255) aCGCTGATTGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTG‑AAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGa > 1:2337980/1‑150 (MQ=255) accttcttGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTG‑AAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGAt > 2:932567/7‑150 (MQ=255) gCTGATTGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTG‑AAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGAtt > 1:428783/1‑150 (MQ=255) gCTGATTGCGGCGGCAGGGGGATTTGTGACGCAAGAAGGTGTGGCTG‑AAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGGTAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGAtt > 1:1686067/1‑150 (MQ=255) cTGATTGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTG‑AAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTc < 1:758847/150‑1 (MQ=255) cTGATTGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTG‑AAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTc > 2:3325132/1‑150 (MQ=255) tGATTGCGGCGGCCGGGGTATTTGTGACGCAAGAAGGGGTGGATG‑TAGGGGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGGAAGCCGGATAAGACGCCTCAAACGTCGCATCCGGCGAAAGGCAATCAGGATTCg > 2:2302103/1‑150 (MQ=255) aTTGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTG‑AAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCt > 1:1834412/1‑150 (MQ=255) cggcggCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTG‑AAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTacc > 2:3241022/1‑150 (MQ=255) ggcggcAGGGGTATTTGTGACGCAAGAAGGTGTGGCTG‑AAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTacca > 1:2395719/1‑150 (MQ=255) ggcAGGGGTATTTGTGACGCAAGAAGGTGTGGCTG‑AAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTaccacca > 1:241987/1‑150 (MQ=255) cAGGGGTATTTGTGACGCAAGAAGGTGTGGCTG‑AAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTaccaccacc > 1:3308558/1‑150 (MQ=255) gggTATTTGTGACGCAAGAAGGTGTGGCTG‑AAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTa > 1:375819/1‑150 (MQ=255) ggTATTTGTGACGCAAGAAGGTGTGGCTG‑AAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTAc > 2:504023/1‑150 (MQ=255) gTATTTGTGACGCAAGAAGGTGTGGCTG‑AAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTAcc < 1:1602114/150‑1 (MQ=255) | TTCAAAGCGCCAGGATTGCTGCATATTGTCGGGCGTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTG‑AAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCG > AP012306/202269‑202566 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |