Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | AP012306 | 202,417 | 0 | T | G | 23.3% | 657.4 / 38.6 | 270 | V409G (GTA→GGA) | tilS | tRNA(Ile)‑lysidine synthetase |
Reads supporting (aligned to +/- strand): ref base T (77/130); new base G (63/0); total (140/130) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 2.02e-22 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
Only 100 of 317 total aligned reads displayed.
TTTCAAAGCGCCAGGATTGCTGCATATTGTCGGGCGTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCG > AP012306/202268‑202566 | ttCAAAGCGCCAGGATTGCTGCATATTGTCGGGCGTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGTa < 2:2786060/150‑1 (MQ=255) cAAAGCGCCAGGATTGCTGCATATTGTCGGGCGTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGGAtt > 1:3188556/1‑150 (MQ=255) cAAAGCGCCAGGATTGCTGCATATTGTCGGGCGTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACCCTGATTTTGGC‑GGCCGGGGGAtt > 2:3103170/1‑150 (MQ=255) aGCGCCAGGATTGCTGCATATTGTCGGGCGTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGAGACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGGCGGGGGAttttt > 2:2470064/1‑148 (MQ=255) aGCGCCAGGATTGCTGCATATTGTCGGGCGTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGTATTtgt < 1:1628992/150‑1 (MQ=255) aGCGCCAGGATTGCTGCATATTGTCGGGCGTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGGATTtgt > 1:659490/1‑150 (MQ=255) aGCGCCAGGATTGCTGCATATTGTCGGGCGTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGGATTtgt > 1:621017/1‑150 (MQ=255) cgcCAGGATTGCTGCATATTGTCGGGCGTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGTATTTGTGa > 1:2265213/1‑150 (MQ=255) gcCAGGATTGCTGCATATTGTCGGGCGTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGGAGGGGGATTTGTGAc > 1:2571592/1‑150 (MQ=255) gcCAGGATTGCTGCATATTGTCGGGCGTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGTATTTGTGAc < 2:858764/150‑1 (MQ=255) ccAGGATTGCTGCATATTGTCGGGCGTAACGGCGGACGTAAGCTAAAAAAAATCTGGCAAGAGCCGGGCGGGCCGCCGTGGCCACGTGACACCACCCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGGCAGGGGGATTT‑TGACg > 2:2032090/1‑150 (MQ=255) aGGATTGCTGCATATTGTCGGGCGTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGTATTTGTGACGCa < 2:2099753/150‑1 (MQ=255) aGGATTGCTGCATATTGTCGGGCGTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGGATTTGTGACGCa > 1:2384186/1‑150 (MQ=255) ggATTGCTGCATATTGTCGGGCGTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGGATTTGTGACGCaa > 1:1260392/1‑150 (MQ=255) gATTGCTGCATATTGTCGGGCGTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGGATTTTTGGCGCaag > 2:2455940/1‑150 (MQ=255) ctgcATATTGTCGGGCGTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGTATTTGTGACGCAAGAAGgt < 2:3700164/150‑1 (MQ=255) gcATATTGTCGGGCGTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGTATTTGTGACGCAAGAAGgtgt < 2:1762390/150‑1 (MQ=255) cGGGCGTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAgg < 1:2045892/150‑1 (MQ=255) cGGGCGTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGGATTTGTGACGCAAGAAGGTGTGGCTGAAgg > 1:382219/1‑150 (MQ=255) gCGTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTga < 1:1092678/150‑1 (MQ=255) cGTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTgag < 2:3241346/150‑1 (MQ=255) gTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTgaga < 1:856607/150‑1 (MQ=255) gTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGGGTTTTTGACGCAAAAAGGGGGGGGTGGAggggggg > 2:1515769/1‑145 (MQ=255) tAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGGATTTGTGACGCAAGAAGGGGTGGCTGAAGGTgggca > 1:3702308/1‑146 (MQ=255) tAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGGATTTGTGACGCAAGAAGGGGTGGCTGAAGGGGGGaa > 1:1450625/1‑150 (MQ=255) aCGGTGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATg < 1:4223481/150‑1 (MQ=255) cggcggACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATgg < 1:1540761/150‑1 (MQ=255) ggcggACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGc < 1:1003717/150‑1 (MQ=255) cggACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGGATTTGTGACGCAAGAAGGTGTGGCTGAAGGGGAGAATGGCgg > 2:3884736/1‑149 (MQ=255) cggACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGGATTTGTGACGCAAGAAGGTGTGGCTGAAGGGGAGAATGGCGt > 2:1167978/1‑150 (MQ=255) ggACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGGATTTGTGACGCAAGAAGGGGTGGCTGGAGGGGAGAAAGGGGTa > 2:2592188/1‑150 (MQ=255) aCGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAg > 1:1489395/1‑150 (MQ=255) aCGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGGATTTGTGACGCAAGAAGGGGGGGCTGAAGGGGGGAATGGCGGAAg > 2:657729/1‑150 (MQ=255) gTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGtt > 1:342735/1‑150 (MQ=255) gTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGtt < 1:4035582/150‑1 (MQ=255) gTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGtt > 1:1769051/1‑150 (MQ=255) gTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGGATTTGTGACGCAAGAAGGTGTGGCTGAAGGGGAGAATGGCGGAAGtt > 2:2830641/1‑150 (MQ=255) aaGCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGTATTTGTGAAGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGtttt > 2:3580035/1‑150 (MQ=255) gCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGt > 1:3733646/1‑150 (MQ=255) tAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCt < 2:1914015/150‑1 (MQ=255) aaaGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTg < 1:3586764/150‑1 (MQ=255) aaaGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTg < 1:1203395/150‑1 (MQ=255) aaTCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGGGAGAATGGCGTAAGGTTTTTCTGGCAGaa > 2:3147914/1‑150 (MQ=255) aTCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCATGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGGATTTGTGACGCAAGAAGGTGTGGATGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGaaa > 2:4310822/1‑150 (MQ=255) tCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGaaaa > 1:3237198/1‑150 (MQ=255) cTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAAc < 2:3986683/150‑1 (MQ=255) tGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGGATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGGAAGTTTTGTCTTGCAGAAAACg > 2:3411559/1‑150 (MQ=255) ggCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGc > 1:722651/1‑150 (MQ=255) ggCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGGATTTGTGACGCCAGAAGGTGGGGCTGGAGGGGAGAATGGCGTAAGTTTTTTCTGGGAGAAAAAGc > 2:4368458/1‑150 (MQ=255) gCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCt < 1:2863003/150‑1 (MQ=255) aaGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGGATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCCTa > 1:945434/1‑150 (MQ=255) agagCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAg < 1:2149309/150‑1 (MQ=255) gagCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGGATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGt > 2:1660568/1‑150 (MQ=255) agCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGGATTTGTGACGCCAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTTGCCGAAAACGGCTAGtt > 2:1021580/1‑150 (MQ=255) cTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGGATTTGTGACGCAAGAAGGGGTGGCTGAAGGAGAGAATGGCGTAAGTTTTGTCTGGGAGAAAACGCTTAGTTaa > 2:4176032/1‑150 (MQ=255) tGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGGATTTGTGACGCAAGAAGGGGTGGCTGAAGGTGAGAATGGGGTAAGGTTTGTCTGGCAGAAAACGCTTAGTTAAg > 2:3906475/1‑150 (MQ=255) ggCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTg < 1:1972899/150‑1 (MQ=255) gCGTGCCGCCGTGGCTACGTGACGCCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGa < 2:2962572/150‑1 (MQ=255) cGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGaa < 2:1333443/150‑1 (MQ=255) gccgccGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGGATTTGTTGCGCAAGAAGGTGTTGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGGAGAAAACGCTTAGTTAAGTGAAAGc > 2:2257158/1‑150 (MQ=255) cgccgTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCg < 2:1471972/150‑1 (MQ=255) tGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGGATTTGTGACGCAAGAAGGGGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGGTaa > 2:2206733/1‑150 (MQ=255) ggCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAg > 1:3996203/1‑150 (MQ=255) gCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGa < 1:1304389/150‑1 (MQ=255) cTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GACAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGAc > 1:1715077/1‑150 (MQ=255) aCGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGc > 1:2691019/1‑150 (MQ=255) aCGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGGATTTGTGACGCAAGAAGGTGTGGCTGAAGGGGAGAATGGCGTAAGTTTTGTCTGGCAGGAAACGCTTAGTTAAGTGAAAACCGGGTAAGACGc > 2:3808632/1‑150 (MQ=255) cGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGGATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAAAGCTTAGTTAAGTGAAAACCGGATAAGACGCa > 2:4112669/1‑150 (MQ=255) tGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATc < 1:1231354/150‑1 (MQ=255) tGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATc > 1:3108182/1‑150 (MQ=255) gACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGGATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCa > 2:544735/1‑150 (MQ=255) caccacGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGGATTTGTGACGCAAGAAGGTGTGGCTGAAGGGGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAACCGGATAAGACGCCTCaaa > 2:1946808/1‑150 (MQ=255) ccacGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGGATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACg > 2:2912880/1‑150 (MQ=255) cacGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGt < 2:1145546/150‑1 (MQ=255) acGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTc < 1:4273495/150‑1 (MQ=255) acGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTc > 1:1352999/1‑150 (MQ=255) gCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGc < 2:1195319/150‑1 (MQ=255) ccACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCa < 2:230850/150‑1 (MQ=255) cACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGGATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCAt > 1:1078374/1‑150 (MQ=255) cACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGGATTTGTGACGCAAGAAGGTGTGGCTGAAGGGGAGAATGGCGTAAGGTTTGTCTGGCAGAAAACGCTTTGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCAt > 2:1891105/1‑150 (MQ=255) ctgctgTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATcc > 1:573664/1‑150 (MQ=255) gTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGGATTTGTGACGCAAGAAGGTGTGGCTGAAGGGGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGa > 1:298427/1‑150 (MQ=255) tttATGGCGAAACGCTGATTGCGGC‑GGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGaaa > 1:1650307/1‑150 (MQ=255) aCGCTGATTGCGGC‑GGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGGGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGa > 2:1276189/1‑150 (MQ=255) cGCTGATTGCGGC‑GGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGAt < 2:4328769/150‑1 (MQ=255) cTGATTGCGGC‑GGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTc > 1:498236/1‑150 (MQ=255) tGATTGCGGC‑GGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCg < 1:2216405/150‑1 (MQ=255) ttGCGGC‑GGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCtt < 2:1083605/150‑1 (MQ=255) tGCGGC‑GGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTa < 2:725670/150‑1 (MQ=255) tGCGGC‑GGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTa < 2:1811191/150‑1 (MQ=255) gcggc‑gGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTac < 2:2728346/150‑1 (MQ=255) ggc‑ggcAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTacca > 1:3633038/1‑150 (MQ=255) gc‑ggcAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTaccac < 1:3510570/150‑1 (MQ=255) c‑ggcAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTaccacc > 1:4172747/1‑150 (MQ=255) ggcAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTaccacca > 2:3027791/1‑150 (MQ=255) cAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTaccaccacc > 1:4406782/1‑150 (MQ=255) aGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCg > 2:427821/1‑150 (MQ=255) aGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCg > 1:1423972/1‑150 (MQ=255) ggTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTAc > 1:4081581/1‑150 (MQ=255) gTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTAcc < 2:2368240/150‑1 (MQ=255) | TTTCAAAGCGCCAGGATTGCTGCATATTGTCGGGCGTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGC‑GGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCG > AP012306/202268‑202566 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |