| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AP012306 | 1,226,557 | 0 | A | G | 28.0% | 366.1 / 82.6 | 175 | G55G (GGA→GGG) | ydcU | predicted spermidine/putrescine transporter subunit |
| Reads supporting (aligned to +/- strand): ref base A (13/113); new base G (49/0); total (62/113) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.07e-31 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 204 total aligned reads displayed.
TTGCAATCACCTTCACGTCCAGGTCTGGGTAAGGTGTCCGGTTTCTTCTGGCATAATCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAACGCCGGAACTGACGCTGGCGAATATCCGTGCGC‑T‑G‑TTTAATCCGGCGAATTACGACATCATTCTCCGCACGCTGACTATGGCTGTGGCAGTCACTATCGCCAGCGCCATTCTGGC > AP012306/1226408‑1226706 | tGCAATCACCTTCACGTCCAGGTCTGGGTAAGGTGTCCGGTTTCTTCTGGCATAATCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGAt < 1:1299199/150‑1 (MQ=255) gCAATCACCTTCACGTCCAGGTCTGGGTAAGGTGTCCGGTTTCTTCTGGCATAATCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGGtt > 2:3935999/1‑150 (MQ=255) aaTCACCTTCACGTCCAGGTCTGGGTAAGGTGTCCGGTTTCTTCTGGCATAATCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGAtttt < 2:2752368/150‑1 (MQ=255) tCACCTTCACGTCCAGGTCTGGGTAAGGTGTCCGGTTTCTTCTGGCATAATCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGATTTtat < 1:3625784/150‑1 (MQ=255) ttCACGTCCAGGTCTGGGTAAGGTGTCCGGTTTCTTCTGGCATAATCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGATTTTATACttt < 1:4074711/150‑1 (MQ=255) ttCACGTCCAGGTCTGGGTAAGGTGTCCGGTTTCTTCTGGCATAATCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGAGTTTTTACttt > 1:1772544/1‑150 (MQ=255) cACGTCCAGGTCTGGGTAAGGTGTCCGGTTTCTTCTGGCATAATCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGATTTTATACTTTTg < 2:1559540/150‑1 (MQ=255) cACGTCCAGGTCTGGGTAAGGTGTCCGGTTTCTTCTGGCATAATCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGATTTTATACTTTTg < 1:967824/150‑1 (MQ=255) gTCGAGGTCTGGGTAAGGTGTCCGGTTTCTTCTGGCATAATGCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACg < 2:2611845/150‑1 (MQ=255) gTCCAGGTCTGGGTAAGGTGTCCGGTTTCTTCTGGCATAATCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGGTTTTTTACTTTTTACg > 1:29597/1‑150 (MQ=255) gTCCAGGTCTGGGTAAGGTGTCCGGTTTCTTCTGGCATAATCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGGGTTTTTACttttttcg > 2:3355154/1‑146 (MQ=255) gTCCAGGTCTGGGTAAGGTGTCCGGTTTCTTCTGGCATAATCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACg < 2:3075531/150‑1 (MQ=255) gTCCAGGTCTGGGTAAGGTGTCCGGTTTCTTCTGGCATAATCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACg < 1:3286140/150‑1 (MQ=255) cAGGTCTGGGTAAGGTGTCCGGTTTCTTCTGGCATAATCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGATTTTTTACtttttaagagt > 1:1428886/1‑143 (MQ=255) aGGTCTGGGTAAGGTGTCCGGTTTCTTCTGGCATAATCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGGTTTTTTACTTTTTACGAttt > 1:81684/1‑150 (MQ=255) aGGTCTGGGTAAGGTGTCCGGTTTCTTCTGGCATAATCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGGTTTTTTAATTTTTTCGAttt > 2:378795/1‑150 (MQ=255) ggTCTGGGTAAGGTGTCCGGTTTCTTCTGGCATAATCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGGTTTTATACTTTTTACGATTTc > 1:2891254/1‑150 (MQ=255) gTCTGGGTAAGGTGTCCGGTTTCTTCTGGCATAATCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGGTTTTTTACCTTTTTCGATTTCa > 1:541014/1‑150 (MQ=255) cTGGGTAAGGTGTCCGGTTTCTTCTGGCATAATCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCAcc < 2:3245899/150‑1 (MQ=255) tGGGTAAGGTGTCCGGTTTCTTCTGGCATAATCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGGTTTTTTTCTTTTTTCGATTTCAccc > 2:2794248/1‑149 (MQ=255) tGGGTAAGGTGTCCGGTTTCTTCTGGCATAATCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCa < 2:1469483/150‑1 (MQ=255) ggTAAGGTGTCCGGTTTCTTCTGGCATAATCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGATTTTTTACTTTTTACGATTTCACCCTg > 1:997118/1‑150 (MQ=255) gTAAGGTGTCCGGTTTCTTCTGGCATAATCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGATTTTATACTTTTTACGATTTCACCATgg > 1:1665333/1‑149 (MQ=255) gTAAGGTGTCCGGTTTCTTCTGGCATAATCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGt < 1:2033827/150‑1 (MQ=255) gTAAGGTGTCCGGTTTCTTCTGGCATAATCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGt < 1:3883644/150‑1 (MQ=255) tAAGGTTGCCGGTTTTTTCTGGTCTAATGCGGGGCTTGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTc < 2:2318840/150‑1 (MQ=255) tAAGGTGTCCGGTTTCTTCTGGCATAATCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTc < 2:2953060/150‑1 (MQ=255) tAAGGTGTCCGGTTTCTTCTGGCATAATCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTc < 1:2633836/150‑1 (MQ=255) aGGTGTCCGGTTTCTTCTGGCATAATCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGGTTTTTTACTTTTTACGATTTCACCATGTCgg > 1:1409969/1‑150 (MQ=255) gtgtCCGGTTTCTTCTGGCATAATCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGGGTTTTTAATTTTGTCGGTTTTACCATGTCggga > 2:3207302/1‑148 (MQ=255) gtCCGGTTTCTTCTGGCATAATCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGGTTTTTTTCTTTTTACGATTTTACCACGTCgggtac > 2:1631625/1‑146 (MQ=255) gTTTCCTCTGGCATAATCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAACGCCgg < 2:3570132/150‑1 (MQ=255) cttctGGCATAATCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGGTTTTTTTCTTTTTACGATTTTACCCTGTCGGTAAAGCCGGGACt > 1:1802116/1‑150 (MQ=255) ttctGGCATAATCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGGATTTATTCTTTTTACCCGTTCACCCTGTCGGGAACGcccggaccg > 1:3743794/1‑143 (MQ=255) ctGGCATAATCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGGTTTTTTTCTTTTTACGCTTTTACCATTTTGGTAACGCCGGGAATGAc > 2:551458/1‑150 (MQ=255) gCATAATCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGGTTTTTTACTTTTTACGATTTTCCCATTTCGGGAACGCCGGGACTGACGCt > 1:1189640/1‑150 (MQ=255) aTAATCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGGTTTTTTACTTTTTACGGTTTCACCATGTCGGTAACGCCCGAACTGACGCTgg > 1:2444068/1‑150 (MQ=255) aTAATCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGGGTTTTTTCTTTTTTCGATTTTTCCATGTCGGTAACCCCCGGACCTACGCTgg > 2:1062143/1‑150 (MQ=255) aTAATCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAACGCCGGAACTGACGCTgg < 2:2128301/150‑1 (MQ=255) tAATCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAACGCCGGAACTGACGCTGGc < 1:1311739/150‑1 (MQ=255) aaTCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGGTTTTTTTCTTTTTTCGATTTTTCCCTGTTGGGAACGCCCGGACTGTCGCTGGCg > 2:2811861/1‑150 (MQ=255) aaTCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAACGCCGGAACTGACGCTGGCg < 1:3073943/150‑1 (MQ=255) aaTCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAACGCCGGAACTGACGCTGGCg < 2:1290202/150‑1 (MQ=255) cGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAACGCCGGAACTGACGCTGGCGAata < 1:2951522/150‑1 (MQ=255) cGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAACGCCGGAACTGACGCTGGCGAata < 1:702926/150‑1 (MQ=255) ggggctggggctGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAACGCCGGAACTGACGCTGGCGAatat < 2:1243691/150‑1 (MQ=255) ggctggggctgTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAACGCCGGAACTGACGCTGGCGAATATcc < 1:1258985/150‑1 (MQ=255) tggggctgTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAACGCCGGAACTGACGCTGGCGAATATCCGTg < 1:4287279/150‑1 (MQ=255) ggggctgTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGGGTTTTTTATTTTTACGATTTTCCCATGTCGGGAAAGCCGGGACTGACGCTGGGGGATAACCCTgc > 2:544506/1‑150 (MQ=255) ggggctgTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAACGCCGGAACTGACGCTGGCGAATATCCGTgc < 1:1126334/150‑1 (MQ=255) tgTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGGTTTTATACTTTTTACGATTTTACCATGTCGGTAACGCCCGAACTTACGCTTGCGAATAACCGTGCGC‑T‑G‑t > 2:3739287/1‑150 (MQ=255) gTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGGTTTTTTAATTTTTTTGATTTTCCCATGTCGGTAAAGCCGGAACTGACGCCGGCGGATATTCCTGCGC‑T‑G‑tt > 2:4017815/1‑150 (MQ=255) ttACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAACGCCGGAACTGACGCTGGCGAATATCCGTGCGC‑T‑G‑TTTAAt < 1:3802320/150‑1 (MQ=255) aCTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCGCCATGTCGGTAACGCCGGAACTGACGCTGGCGAATATCCGTGCGC‑T‑G‑TTTAATcc < 2:1200953/150‑1 (MQ=255) aCTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAACGCCGGAACTGACGCTGGCGAATATCCGTGCGC‑T‑G‑TTTAATcc < 2:3447824/150‑1 (MQ=255) tgctgcTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGGTTTTATAATTTTGACGATTTCACCCTGTCGGGAAAGCCCGAAATGACGCCGGGGAATATTCGTGGCC‑T‑G‑GTTAAttccg > 2:3124185/1‑146 (MQ=255) gctgctTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAACGCCGGAACTGACGCTGGCGAATATCCGTGCGC‑T‑G‑TTTAATCCGGc < 1:3843335/150‑1 (MQ=255) tgctTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGATTTTATCCTTTTGACGATTTCACCATGTCGGTAACGCCGGAACTGACGCTGGCGAATATCCGTGCGC‑T‑G‑TTTAATCCGGCGa < 2:4372399/150‑1 (MQ=255) gctTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAACGCCGGAACTGACGCTGGCGAATATCCGTGCGC‑T‑G‑TTTAATCCGGCGaa < 2:247144/150‑1 (MQ=255) ttGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGGTTTTTTAATTTTTTCGATTTTACCATATCGGTAACCCCCGAACTGACGCCGGCGAATATTCCTGCGC‑T‑G‑TTTTATTCGGCggaat > 2:2376725/1‑146 (MQ=255) tGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAACGCCGGAACTGACGCTGGCGAATATCCGTGCGC‑T‑G‑TTTAATCCGGCGAATTa < 1:3712623/150‑1 (MQ=255) cccGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAACGCCGGAACTGACGCTGGCGAATATCCGTGCGC‑T‑G‑TTTAATCCGGCGAATTACGa < 2:2840242/150‑1 (MQ=255) ccGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAACGCCGGAACTGACGCTGGCGAATATCCGTGCGC‑T‑G‑TTTAATCCGGCGAATTACGAc < 1:2151066/150‑1 (MQ=255) tAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGGTTTTTTTCTTTTTGCGATTTTCCCCTTTCGGGAACGCCCGGACTTACGCTGGGGGATATTCCTGCGC‑C‑GTTTTAATCCGG‑GAAATACGAcaacc > 2:2076490/1‑147 (MQ=255) tAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGGGTTTTTTCTTTTTTCGATTTTCCCCTGTCGGTAAAGCCGGGAATGACGCTGGGGGATATCCGTGCGC‑T‑G‑TTTTATTCCGCGAATTTCGAcatca > 2:2680929/1‑150 (MQ=255) aTGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGGTTTTTTTCTTTTTACGGTTTCACCATGTCGGGAACGCCGGGACTGACGCTGGCGAATATCCGTGCGC‑T‑G‑TTTTATTCGGCGGATTACGACATCCtt > 2:250886/1‑150 (MQ=255) aTGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGGGTTTTTATTTTTGACGGGTTTACCATGTCGGGAACGCCGGGAAAGAAGCTTGGGAAAATCCGTGCGG‑G‑G‑TTTAATCCGGCGAAATACGAGATCAtt > 2:4228443/1‑150 (MQ=255) aTGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAACGCCGGAACTGACGCTGGCGAATATCCGTGCGC‑T‑G‑TTTAATCCGGCGAATTACGACATCAtt < 2:893221/150‑1 (MQ=255) aTGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAACGCCGGAACTGACGCTGGCGAATATCCGTGCGC‑T‑G‑TTTAATCCGGCGAATTACGACATCAtt < 1:3035983/150‑1 (MQ=255) ggTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAACGCCGGAACTGACGCTGGCGAATATCCGTGCGC‑T‑G‑TTTAATCCGGCGAATTACGACATCATTCTcc < 2:280477/150‑1 (MQ=255) gTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAACGCCGGAACTGACGCTGGCGAATATCCGTGCGC‑T‑G‑TTTAATCCGGCGAATTACGACATCATTCTCCg < 2:1814484/150‑1 (MQ=255) tGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGGTTTTTTTATTTTTTCGGTTTCACCATGTCGGTAACGCCCGGACTGACGCCGGGGGATATCCCTGCGC‑TGG‑TTTATTCCGG‑GGATTACGACATCATTTTCCGccc > 2:2758541/1‑148 (MQ=255) cATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAACGCCGGAACTGACGCTGGCGAATATCCGTGCGC‑T‑G‑TTTAATCCGGCGAATTACGACATCATTCTCCGCACGCt < 1:465529/150‑1 (MQ=255) tGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGGTTTTATAATTTTTTCGATTTTTCCCTGTCGGGAAAGCCGGAACCCACGCTGGCGGATATCCGGGCGC‑T‑G‑TTTAATTCCGCGAATTTCGACATCATTCTCCCCACCCCGAc > 2:2865347/1‑150 (MQ=255) gTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAACGCCGGAACTGACGCTGGCGAATATCCGTGCGC‑T‑G‑TTTAATCCGGCGAATTACGACATCATTCTCCGCACGCTGACt < 1:2603619/150‑1 (MQ=255) tCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAACGCCGGAACTGACGCTGGCGAATATCCGTGCGC‑T‑G‑TTTAATCCGGCGAATTACGACATCATTCTCCGCACGCTGACTa < 2:3466455/150‑1 (MQ=255) cTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGGTTTTTTACTTTTGACGATTTCACCATGTCGGTAACGCCGGAACTGACGCTGGCGGATATCCGTGCGC‑T‑G‑TTTAATCCGGCGAATTACGACATCATTCTCCGCACGCTGACTAt > 2:2424405/1‑150 (MQ=255) cTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGGTTTTATATTTTTTTCGGTTTTCCCATGTCGGGAACACCGGGAATGACGCTGGGGAATATCCGGGCGC‑T‑G‑TTTTATCCGGCGAATTACGACATCATTTTCCGCCCGCGGACTAt > 2:1292090/1‑150 (MQ=255) cTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAACGCCGGAACTGACGCTGGCGAATATCCGTGCGC‑T‑G‑TTTAATCCGGCGAATTACGACATCATTCTCCGCACGCTGACTAt < 2:929251/150‑1 (MQ=255) tATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGAGTTTTTTCTTTTTGCGACTTTACCCTTTTGGGAAAGCCGGAAATGGCGCCTGCGAGAATCCCTGTGCTT‑G‑TTTAAT‑CGGCGGAATATGACATCAGTTTCCGCACCCTGACTATg > 2:224147/1‑150 (MQ=255) aTTTCGGCTCGCTGCTGACACTGTTATGGCAGGGGTTTTTTTCTTTTTTCGCTTTCCCCCTGTCGGGAAAGCCCGAACCGACGCCCGGGAATATCCGGGCGC‑T‑G‑GTTTATCCGGCGAATTACGACATCATTTTCCCCACGCTGACTATgg > 2:3483981/1‑150 (MQ=255) ttCGGCTCGCTGCTGACACTGTTATGGCAGGGGTTTTTTACTTTTTTCGGTTTTACCATGTCGGGAAAGCCGGGACTGACGCTGGCGAATATCCCTGGGC‑T‑G‑TTTTATCCGGCGAAATACGACATTCTTTTCCTCCCCCTGTCTATTGCt > 2:4075452/1‑150 (MQ=255) cGGCTCGCTGCTGACACTGTTATGGCAGGGGTTTTTTACTTTTTTCGGTTTTACCATGTCGGGAACGCCGGAACTGACGCTGGCGAATATCCGTGCGC‑T‑G‑TTTTATCCGGCGGATTACGACATCATTCTCCGCACGCTGACTATTGCtgt > 2:152174/1‑150 (MQ=255) cGGCTCGCTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAACGCCGGAACTGACGCTGGCGAATATCCGTGCGC‑T‑G‑TTTAATCCGGCGAATTACGACATCATTCTCCGCACGCTGACTATGGCtgt < 1:1861004/150‑1 (MQ=255) gCTCGCTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAACGCCGGAACTGACGCTGGCGAATATCCGTGCGC‑T‑G‑TTTAATCCGGCGAATTACGACATCATTCTCCGCACGCTGACTATGGCTGTgg < 2:2201405/150‑1 (MQ=255) cGCTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAACGCCGGAACTGACGCTGGCGAATATCCGTGCGC‑T‑G‑TTTAATCCGGCGAATTACGACATCATTCTCCGCACGCTGACTATGGCTGTGGCAg > 1:2793/1‑150 (MQ=255) gctgctGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAACGCCGGAACTGACGCTGGCGAATATCCGTGCGC‑T‑G‑TTTAATCCGGCGAATTACGACATCATTCTCCGCACGCTGACTATGGCTGTGGCAGt < 1:236388/150‑1 (MQ=255) acacTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAACGCCGGAACTGACGCTGGCGAATATCCGTGCGC‑T‑G‑TTTAATCCGGCGAATTACGACATCATTCTCCGCACGCTGACTATGGCTGTGGCAGTCACTATc < 1:2320838/150‑1 (MQ=255) tGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAACGCCGGAACTGACGCTGGCGAATATCCGTGCGC‑T‑G‑TTTAATCCGGCGAATTACGACATCATTCTCCGCACGCTGACTATGGCTGTGGCAGTCACTATCGCCa < 1:3204539/150‑1 (MQ=255) tATGGCAGGGGTTTTATACTTTTTACGATTTTACCATGTCGGTAACGCCGGAACTGACGCTGGCGAATATCCGTGCGC‑T‑G‑TTTAATCCGGCGAATTACGACATCATTCTCCGCCCGCTGACTATTGCTGTGGCAGTCACTATCGCCAgcc > 2:3017363/1‑149 (MQ=255) aTGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAACGCCGGAACTGACGCTGGCGAATATCCGTGCGC‑T‑G‑TTTAATCCGGCGAATTACGACATCATTCTCCGCACGCTGACTATGGCTGTGGCAGTCACTATCGCCAgcgc > 1:4197946/1‑150 (MQ=255) tGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAACGCCGGAACTGACGCTGGCGAATATCCGTGCGC‑T‑G‑TTTAATCCGGCGAATTACGACATCATTCTCCGCACGCTGACTATGGCTGTGGCAGTCACTATCGCCAGCGcc > 1:1538983/1‑150 (MQ=255) tGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAACGCCGGAACTGACGCTGGCGAATATCCGTGCGC‑T‑G‑TTTAATCCGGCGAATTACGACATCATTCTCCGCACGCTGACTATGGCTGTGGCAGTCACTATCGCCAGCGcc < 1:2695690/150‑1 (MQ=255) gCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAACGCCGGAACTGACGCTGGCGAATATCCGTGCGC‑T‑G‑TTTAATCCGGCGAATTACGACATCATTCTCCGCACGCTGACTATGGCTGTGGCAGTCACTATCGCCAGCGCCAt > 1:2221099/1‑150 (MQ=255) cAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAACGCCGGAACTGACGCTGGCGAATATCCGTGCGC‑T‑G‑TTTAATCCGGCGAATTACGACATCATTCTCCGCACGCTGACTATGGCTGTGGCAGTCACTATCGCCAGCGCCAtt > 1:3397988/1‑150 (MQ=255) aGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAACGCCGGAACTGACGCTGGCGAATATCCGTGCGC‑T‑G‑TTTAATCCGGCGAATTACGACATCATTCTCCGCACGCTGACTATGGCTGTGGCAGTCACTATCGCCAGCGCCATTc > 2:611410/1‑150 (MQ=255) gggATTTTATACTTTTGACGATTTCACCATGTCGGTAACGCCGGAACTGACGCTGGCGAATATCCGTGCGC‑T‑G‑TTTAATCCGGCGAATTACGACATCATTCTCCGCACGCTGACTATGGCTGTGGCAGTCACTATCGCCAGCGCCATTCt < 1:759964/150‑1 (MQ=255) aTTTTATACTTTTGACGATTTCACCATGTCGGTAACGCCGGAACTGACGCTGGCGAATATCCGTGCGC‑T‑G‑TTTAATCCGGCGAATTACGACATCATTCTCCGCACGCTGACTATGGCTGTGGCAGTCACTATCGCCAGCGCCATTCTGGc < 1:3533908/150‑1 (MQ=255) aTTTTATACTTTTGACGATTTCACCATGTCGGTAACGCCGGAACTGACGCTGGCGAATATCCGTGCGC‑T‑G‑TTTAATCCGGCGAATTACGACATCATTCTCCGCACGCTGACTATGGCTGTGGCAGTCACTATCGCCAGCGCCATTCTGGc > 2:742542/1‑150 (MQ=255) aTTTTATACTTTTGACGATTTCACCATGTCGGTAACGCCGGAACTGACGCTGGCGAATATCCGTGCGC‑T‑G‑TTTAATCCGGCGAATTACGACATCATTCTCCGCACGCTGACTATGGCTGTGGCAGTCACTATCGCCAGCGCCATTCTGGc < 1:4342527/150‑1 (MQ=255) | TTGCAATCACCTTCACGTCCAGGTCTGGGTAAGGTGTCCGGTTTCTTCTGGCATAATCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAACGCCGGAACTGACGCTGGCGAATATCCGTGCGC‑T‑G‑TTTAATCCGGCGAATTACGACATCATTCTCCGCACGCTGACTATGGCTGTGGCAGTCACTATCGCCAGCGCCATTCTGGC > AP012306/1226408‑1226706 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |