Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | AP012306 | 2,212,753 | 0 | A | C | 27.7% | 374.5 / 53.8 | 159 | Y241D (TAT→GAT) | hcaT | predicted 3‑phenylpropionic transporter |
Reads supporting (aligned to +/- strand): ref base A (104/11); new base C (0/44); total (104/55) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 3.16e-29 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
Only 100 of 213 total aligned reads displayed.
CAACGCCGTAGTTGCTCCCATAATGCCCCAGCGCACTACGCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTT‑CCGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCACGCAGACCAACCGG > AP012306/2212604‑2212899 | aCGCCGTAGTTGCTCCCATAATGCCCCAGCGCACTACGCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTT‑CCGCCACCACGCCCAGCGACCACAAATAcc > 1:582245/1‑150 (MQ=255) aCGCCGTAGTTGCTCCCATAATGCCCCAGCGCACTACGCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTT‑CCGCCACCACGCCCAGCGACCACAAATAcc > 1:1375939/1‑150 (MQ=255) cGCCGTAGTTGCTCCCATAATGCCCCAGCGCACTACGCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTT‑CCGCCACCACGCCCAGCGACCACAAATAccc < 1:1470047/150‑1 (MQ=255) gCCGTAGTTGCTCCCATAATGCCCCAGCGCACTACGCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTT‑CCGCCACCACGCCCAGCGACCACAAATAcccc < 2:3638378/150‑1 (MQ=255) cGTAGTTGCTCCCATAATGCCCCAGCGCACTACGCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGGAAAGTTTATTACTCAGCGCAAAGATAATGACTT‑CCGCCACCACGCCCAGCGACCACAAATACCCCAc > 1:2074749/1‑150 (MQ=255) cGTAGTTGCTCCCATAATGCCCCAGCGCACTACGCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTT‑CCGCCACCACGCCCAGCGACCACAAATAcccccc > 2:3152091/1‑148 (MQ=255) gTAGTTGCTCCCATAATGCCCCAGCGCACTACGCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTT‑CCGCCACCACGCCCAGCGACCACAAATACCCCAcc < 1:855172/150‑1 (MQ=255) tAGTTGCTCCCATAATGCCCCAGCGCACTACGCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTT‑CCGCCACCACGCCCAGCGACCACAAATCCCCCAccg < 2:3748567/150‑1 (MQ=255) ttGCTCCCATAATGCCCCAGCGCACTACGCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTT‑CCGCCACCACGCCCAGCGACCACAAATCCCCCAccgccg < 1:165014/150‑1 (MQ=255) tCCCATAATGCCCCAGCGCACTACGCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAACGCAAAGATAATGAATT‑CCGCCACCACGCCCAGCGACCACAAATACCCCCCCgccgaggc > 2:4075265/1‑150 (MQ=255) aTAATGCCCCAGCGCACTACGCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTT‑CCGCCACCACGCCCAGCGACCACAAATACCCCACCgcccaggccgag > 2:2670385/1‑150 (MQ=255) aTAATGCCCCAGCGCACTACGCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTT‑CCGCCACCACCCCCAGCGACCACAAATACCCCACCgccgaggccgag > 2:3868901/1‑150 (MQ=255) tAATGCCCCAGCGCACTACGCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTT‑CCGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGt > 1:926970/1‑150 (MQ=255) tAATGCCCCAGCGCACTACGCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTC‑CCGCCACCACGCCCAGCGACCACAAATCCCCCACCGCCGAGGCCGAGt < 2:167314/150‑1 (MQ=255) aaTGCCCCAGCGCACTAAGCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTT‑CCGCCACCACGCCCAGCGACCCCAAATACCCCACCgccgaggccgagga > 2:1011543/1‑148 (MQ=255) cccccAGCGCACTCCGCCGAAAACCGCCGAGATAAACAGCATACCGCGTCCACTACACCGGGGAAAAATTTTATTCCTCAGCGAAAAAAAAATGACTC‑CCCCCCCCCCCCCCAGCGACCAAAAATCCCCCACCGCCGAGGCCGAGTAGcc < 2:2079598/149‑1 (MQ=255) aaGCGCACTACGCCGAAACTCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTC‑CCGCCACCCCGCCCAGCGACCACAAATCCCCCACCGCCGAGGCCGAGTAGCCAGct < 2:2418039/149‑1 (MQ=255) aGCGCACTACGCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTT‑CCGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGctg > 1:3290531/1‑150 (MQ=255) cTACGCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTT‑CCGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCtgcctgcc > 1:3965204/1‑150 (MQ=255) aCGCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTT‑CCGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAg > 2:3088415/1‑150 (MQ=255) cgccgcAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTT‑CCGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGt > 1:3564533/1‑150 (MQ=255) cgccgaAAACCGCCGAGATCAACAGCATATCGCGTGCCCTACAACGGCGAAAAATTTTATTACTCAGCGAAAAGATAATGCCTC‑CCGCCACCCCGCCCAGCGACCAAAAATCCCCCCCCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGt < 2:2631962/150‑1 (MQ=255) gccgcAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAAGGGCGAAAAAGTTTATTACTCAGCGCAAAGATAATGACTC‑CCGCCACCCCGCCCAGCGACCACAAATCCCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTa < 1:4045907/150‑1 (MQ=255) gccgcAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTT‑CCGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCCGCCAGTa > 2:1322437/1‑150 (MQ=255) cAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTT‑CCGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATg > 1:2660151/1‑150 (MQ=255) cAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGGTTAGTACTCAGGGCAAAGATAATGAATT‑CCGCCACCACGACCAGGGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCGGCCAGGAAATg > 2:1849351/1‑150 (MQ=255) aaaaCCGCCGAAACAAACAGCATATCGCGGGCACTACAACGGCGAAAATTTTTATTCCACACGGAAAAGA‑AAAGCCTTCCCGCCCCCCCCCCAAGCACCCAAAAATCCCCCCCCGCCGAGGCGGAGTAGCCAGCTGCCTGCCAGTAAATg < 2:3576070/149‑1 (MQ=255) aTCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTT‑CCGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGgcg > 2:2800677/1‑150 (MQ=255) cGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTT‑CCGCCACCACGCCCAGCGACCACAAATCCCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCt < 1:1877469/150‑1 (MQ=255) gCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTT‑CCGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTa > 1:2201494/1‑150 (MQ=255) gCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTT‑CCGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTa > 2:2961382/1‑150 (MQ=255) tCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTT‑CCGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGt > 1:2288732/1‑150 (MQ=255) aaCAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTT‑CCGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTaa > 2:2080606/1‑150 (MQ=255) aCAGCATATCCCGTGCACTACAACGGCGGAAAAGTTTTTTACTCAGCGCAAAGATAATGACTT‑CCGCCACCACGCCCAGCGACCACAAATACCCCACCCCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAAt > 2:3659296/1‑150 (MQ=255) cAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTT‑CCGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCACTAAAT‑GCGCTAAAACCGTAATAg > 1:428779/1‑150 (MQ=255) cATATCGCGTCCACTACACCGGCGAAAAATTTTATTACTCAGCGAAAAGATAATGCCTC‑CCGCCACCCCGCCCAGCGCCCACAAATCCCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGc < 2:4280251/150‑1 (MQ=255) atatCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTT‑CCGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCT‑AAACCGTAATAAGCCg > 2:1344004/1‑150 (MQ=255) atatCGCGTGCACTACAACGGCGAAAAATTTTATTCCTCAGCGCAAAGATAATGCCTC‑CCGCCCCCCCGCCCAGCGCCCAAAAATCCCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGcc < 2:729470/150‑1 (MQ=255) atacCGCGGCCACTAAAGCGGCGGAAAAGTTTTTTACAAAGCGCAAAGATAATGCCTG‑CCGCCCCCACGCCGGGCGACCAAAATCCCCCCCCCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGcc < 2:1569698/150‑1 (MQ=255) cgcgTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGCCTT‑CCGCCACCACGCCCAGCGACCACAAATCCCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCAt < 1:1771906/150‑1 (MQ=255) cgcgTGCACTACAACGGCGAAAAAGTTTATTACTCAGCGCAAAGAAAATGCCTC‑CCCCCACCCCGCCCAGCGACCAAAAATCCCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCAt < 2:274352/150‑1 (MQ=255) cgcgTGCACTACAACGGCGAAAAAGTTTATTACTCAGCGAAAAGAAAATGCCTC‑CCGCCCCCCCGCCCAGCGCCCACAAATCCCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCAt < 2:3382449/150‑1 (MQ=255) ggTGCCCTACAACGGGGAAAAATTTTATTACCCGGCGAAAAGATAAGGACTC‑CCGCCACCACGCCCAGCGCCCACAAACCCCCCCCCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCAtgt < 2:2170876/149‑1 (MQ=255) cgTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTT‑CCGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCAtgt > 1:2871343/1‑150 (MQ=255) cgTGCACAACAAGGGCGAAAAAGTTTATTCCCCAGCGAAAAAATAATGACTC‑CCGCCACCACGCCCAGCGACCACAAATCCCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCAtgt < 2:1638210/150‑1 (MQ=255) gttcACTACAACGGCGGAAAAGGTTATTACCCAGCGCAAAGATAATGACTT‑TCCCCACCACGCCCAGCCACCACAAAAACCCCACCCCCCACGCCTAGTAGCCAGCTGCCTGCCAGTAAATTGCGCTCAAACCATAATAAGCCGCAttgg > 2:892277/4‑147 (MQ=255) caacacCGGCGAAAAAGTTTATTCCACAGCGCAAAGATAATGCCTC‑CCCCCACCACGCCCAGCCCCCAAAAATCCCCCCCCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGccccc < 2:4298899/148‑1 (MQ=255) cTACAGCGGCGAAAAATTTTTTTCCCCAGCGAAAAAAAAATGCCTT‑CCCCCCCCCCGCCCGGCGCCCAAAAATCCCCCCCCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGccccc < 2:4093570/150‑1 (MQ=255) cTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTT‑CCGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGccccc > 1:1002814/1‑150 (MQ=255) cAACGGCGGAAAAGTTTATTACTCAGCGAAAAGATAATGACTT‑CCGCCACCACGCCCAGCGACCACAAATCCCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGc < 1:340532/150‑1 (MQ=255) aaCGGCGAAAAAGTTTATTACCCAGCGCAAAGATAATGCCTC‑CCGCCCCCCCGCCAAGCGACCAAAAATCCCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCa < 2:2552470/150‑1 (MQ=255) aCGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTT‑CCGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCaa > 1:184414/1‑150 (MQ=255) cggggaaaaaTTTTATTACCAGGCGCAAAAATATAATCTG‑CCGCCCCCCCGCCCAGGAACCAAAAAACCCCCCCCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAAt < 2:846736/144‑1 (MQ=255) ggcggAAAAGTTTATTACTCAGCGCAAAGATAATGACTT‑CCGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATa > 2:1893335/1‑150 (MQ=255) cggAAAAGTTTATTACTCAGCGCAAAGATAATGACTT‑CCGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATaaa > 2:290915/1‑150 (MQ=255) cgaaaaaTTTTATTCCTCAGCGAAAAGATAATGTCTC‑CCGCCACCACCCCCAGCGACCAAAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATaaa < 2:352266/147‑1 (MQ=255) ggAAAAGTTTATTACTCAGCGCAAAGATAATGACTT‑CCGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATaaac > 2:3718914/1‑150 (MQ=255) gaaaaaGTTTATTACCCAGCCAAAAAATAAGGGCTC‑CCGCCCCCACGCCCGGCGCCCACAAATCCCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATaaac < 2:3473841/148‑1 (MQ=255) aaaaGTTTATTACTCAGCGCAAAGATAATGACTT‑CCGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATaaacaa > 1:3765357/1‑150 (MQ=255) aaaTTTTATCCCCCAGCGAAAAAAAAAGGCCTC‑CCGCCACCACCCCCAGCGCCCAAAAATCCCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATaaacaaa < 2:3351842/150‑1 (MQ=255) aggTTTATTACTCAGCGAAAAGAAAATGACTT‑CCGCCACCACGCCCAGCGACCACAAATCCCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATaaacaaac < 1:468879/148‑1 (MQ=255) aaGTTTATTACTCAGCGCAAAGATAATGACTT‑CCGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATaaacaaac > 1:2721973/1‑150 (MQ=255) gTTTATTCCCCAGCGCAAAAATAATGCCTC‑CCGCCACCACGCCCAGCGCCCAAAAATCCCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGc < 2:1842147/150‑1 (MQ=255) tttATTACTCAGCGCAAAGATAATGACTT‑CCGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCa > 2:1102793/1‑150 (MQ=255) tttATTACTCAGCGCAAAGATAATGACTT‑CCGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCa > 1:2487616/1‑150 (MQ=255) ttattaCTCAGCGCAAAGATAATGACTT‑CCGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAg > 2:3608124/1‑150 (MQ=255) ttattaCTCAGCGCAAAGATAATGACTT‑CCGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAg > 1:2162728/1‑150 (MQ=255) tattaCTCAGCGCAAAGATAATGACTT‑CCGCCACCACGCCCAGCGACCACAAATCCCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAgg < 1:3466692/150‑1 (MQ=255) tttaCCCAGCGAAAAGAAAATGCCTC‑CCGCCACCACGCCCAGCCCCCAAAAATCCCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGc < 2:311992/149‑1 (MQ=255) ttaCTCAGCGCAAAGATAATGACTT‑CCGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGcc > 2:1877466/1‑150 (MQ=255) aCTCAGCGCAAAGATAATGACTT‑CCGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAg > 2:333998/1‑150 (MQ=255) cTCAGCGCAAAGATAATGACTT‑CCGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATTTGCCCCCTGCAATAAACAAACGCAGGCCAGa > 1:4028132/1‑150 (MQ=255) cTCAGCGCAAAGATAATGACTT‑CCGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGa > 1:4303033/1‑150 (MQ=255) gcaccgcAACGAGAGTGACTT‑CCGCCACCACGCCCACCGCCCACAACTACCCAACCGCCGTGGCCGAGTAGCCAGCTGCCTGCCAGGAAAGGACGCTAAAACCGTAATAGCACACATGTTCCCCCCGCACTAAACAAACGCAGGCCAgca > 2:518841/5‑148 (MQ=255) cAGCGCAAAGATAATGACTT‑CCGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGaaa > 1:2512954/1‑150 (MQ=255) gcgaAAAGATAATGACTC‑CCGCCACCACGCCCAGCGACCACAAATCCCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAgc < 1:1347290/150‑1 (MQ=255) aaGATAATGACTT‑CCGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAg > 1:3188988/1‑150 (MQ=255) tAATGACTT‑CCGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCt > 2:3883859/1‑150 (MQ=255) tGACTT‑CCGCCCCCACGCCCAGCGACCACAAATCCCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGc < 1:3847894/150‑1 (MQ=255) gcctcccGCCACCACGCCCAGCGACCACAAATCCCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCg < 1:2449636/145‑1 (MQ=255) ccGCCACCACCCCCAGCGACCACAAATCCCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAACCa < 2:486032/150‑1 (MQ=255) cccccccacCCCCAGCGCCCAAAAATCCCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAACCAg < 2:418676/145‑1 (MQ=255) cGCCCCCACGCCCAGCGACCACAAATCCCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAACCAg < 1:3838413/150‑1 (MQ=255) gCCCCCACGCCGAGCGCCCAAAAACCCCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAACCAgc < 1:2095155/150‑1 (MQ=255) gCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAACCAgc > 1:455072/1‑150 (MQ=255) caccacGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAACCAgcgc > 1:106413/1‑150 (MQ=255) caccacGCCCAGCGACCAAAAATCCCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAACCAgcgc < 1:112656/150‑1 (MQ=255) accacGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAACCAGCGcc > 2:4183307/1‑150 (MQ=255) accacGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAACCAGCGcc > 2:3240171/1‑150 (MQ=255) accacGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAACCAGCGcc > 1:672829/1‑150 (MQ=255) cccGCCCAGCGCCCAAAAACCCCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAACCAGCGCCaa < 2:673143/148‑1 (MQ=255) gCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCa > 1:3258330/1‑150 (MQ=255) ccAGCGACCACAAATCCCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCACg < 1:204685/150‑1 (MQ=255) cAGCGCCCACAAACCCCCCCCCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCACGc < 2:1751942/150‑1 (MQ=255) cAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCACGc > 2:1071446/1‑150 (MQ=255) gACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCACGCAGAc > 2:586111/1‑150 (MQ=255) aCCAAAAACACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCACGCAGAcc < 1:4196217/150‑1 (MQ=255) ccAAAAATCCCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCACGCAGACCa < 1:4375968/150‑1 (MQ=255) caaaaaTCCCCCCCCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCACGCAGACCaa < 1:1388085/147‑1 (MQ=255) caAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCACGCAGACCAAcc > 1:2396644/1‑150 (MQ=255) | CAACGCCGTAGTTGCTCCCATAATGCCCCAGCGCACTACGCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAATGACTT‑CCGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCACGCAGACCAACCGG > AP012306/2212604‑2212899 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |