Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | AP012306 | 3,020,670 | 0 | T | G | 33.3% | 383.0 / 11.5 | 219 | K195N (AAA→AAC) | glgC | glucose‑1‑phosphate adenylyltransferase |
Reads supporting (aligned to +/- strand): ref base T (102/44); new base G (73/0); total (175/44) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.54e-09 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
Only 100 of 299 total aligned reads displayed.
ATCAAATCTTTGCCAAAGTCGTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCA‑GGTTTTTCAACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGATAAGCATACGCGAGTAGTCTTGCTT > AP012306/3020521‑3020819 | aTCAAATCTTTGCCAAAGTCGTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCA‑GGt < 2:2647065/150‑1 (MQ=255) tCAAATCTTTGCCAAAGTCGTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCA‑GGtt < 2:991871/150‑1 (MQ=255) aaaTCTTTGCCAAAGTCGTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCA‑GGgttt > 1:1720973/1‑150 (MQ=255) aaTCTTTGCCAAAGTCGTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCA‑GGgtttt > 1:1392920/1‑150 (MQ=255) aaTCTTTGCCAAAGTCGTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGGTAGTC‑GGatttt > 2:3785101/1‑150 (MQ=255) aTCTTTGCCAAAGTCGTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATAGTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCA‑GGGTTTTc > 1:4114272/1‑150 (MQ=255) cTTTGCCAAAGTCGTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCA‑GGTTTTTCaa < 1:123343/150‑1 (MQ=255) cTTTGCCAAAGTCGTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGGTAGCAGGGTTTTTCa > 2:682996/1‑150 (MQ=255) tttGCCAAAGTCGTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGGTAGCA‑GGTTTTTCAAc > 1:983418/1‑150 (MQ=255) tGCCAAAGTCGTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGGTAGCA‑GGGTTTTCAAAGa > 1:1084164/1‑150 (MQ=255) gCCAAAGTCGTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCA‑GGTTTTTCAACGaa > 1:2248078/1‑150 (MQ=255) cAAAGTCGTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCA‑GGTTTTTCAACGAAtt < 1:3022452/150‑1 (MQ=255) cAAAGTCGTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCA‑GGTTTTTCAACGAAtt < 1:1827629/150‑1 (MQ=255) aaGTCGTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCA‑GGGTTTTCAACGGATTCg > 1:78406/1‑150 (MQ=255) cGTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCA‑GGTTTTTCAACGAATTCGATaa > 1:3239/1‑150 (MQ=255) gTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCA‑GGTTTTTCAACGAATTCGATAAt < 1:645765/150‑1 (MQ=255) tGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCA‑GGTTTTTCAACGAATTCGATAAtt < 2:3058501/150‑1 (MQ=255) tGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCA‑GGTTTTTCAACGAATTCGATAAtt > 1:244237/1‑150 (MQ=255) tGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGAA‑GGTTTTTCAACGAATTCGATAAtt > 2:2979930/1‑150 (MQ=255) ggCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCA‑GGTTTTTCAACGAATTCGATAAttt < 1:4298613/150‑1 (MQ=255) tGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCA‑GGTTTTTCAACGAATTCGATAATTTTAt < 1:3988624/150‑1 (MQ=255) tGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCA‑GGTTTTTCAACGAATTCGATAATTTTAt > 1:2955883/1‑150 (MQ=255) ggAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCA‑GGTTTTTCAACGAATTCGATAATTTTATc < 2:1149441/150‑1 (MQ=255) gAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCA‑GGTTTTTCAACGAATTCGATAATTTTATCg < 2:3192759/150‑1 (MQ=255) gTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCA‑GGTTTTTCAACGAATTCGATAATTTTATCGtt < 2:1752847/150‑1 (MQ=255) ctcATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCA‑GGTTTTTCAACGAATTCGATAATTTTATCGTtctc < 1:116443/150‑1 (MQ=255) ctcATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCA‑GGTTTTTCAACGAATTCGATAATTTTATCGTtctc > 1:1381756/1‑150 (MQ=255) tcATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCA‑GGTTTTTCAACGAATTCGATAATTTTATCGTTCtca < 2:2956212/150‑1 (MQ=255) cATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCA‑GGTTTTTCAACGAATTCGATAATTTTATCGTTCtcat > 1:2647272/1‑150 (MQ=255) tCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCA‑GGTTTTTCAACGAATTCGATAATTTTATCGTTCtcatca < 1:1411122/150‑1 (MQ=255) cgcgATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCA‑GGGTTTTCAACGAATTCGATAATTTTATCGTTCTCATCaa > 1:1271958/1‑150 (MQ=255) gATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCA‑GGTTTTTCAACGAATTCGATAATTTTATCGTTCTCATCAACCg < 1:1619652/150‑1 (MQ=255) aTCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGGTTGCA‑GGGTTTTTAACGAATTTGATAATTTTTTCGTTCTCCTCAAccac > 2:2069086/1‑148 (MQ=255) gTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCA‑GGTTTTTCAACGAATTCGATAATTTTATCGTTCTCATCAACCGCCAt > 1:287282/1‑150 (MQ=255) cttcttCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCA‑GGGTTTTCAACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATaa > 2:3651922/1‑150 (MQ=255) ttcttcCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCA‑GGTTTTTCAACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAAc > 1:878249/1‑150 (MQ=255) ttcttcCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCA‑GGTTTTTCAACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAAc > 1:3951017/1‑150 (MQ=255) agcagTTCATACAGATGGTCGGCGTAAAAGACGTAGATCCCCATCCCCGCAAGAGTTTTGCTCGGATCGTTCGGTATGGGGGGGGGGTTAGCG‑GTTTTTAAAAAAAATTCAATATTTTTATCGTTCTCATCAACCGCCATAACGCCAAAt < 2:2798789/150‑1 (MQ=255) gTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCA‑GGGTTTTCAACGAATTCGATAATTTTATCGTTCTCATCAACCGCCCTAACGCCAAAAGCgg > 2:2726357/1‑150 (MQ=255) tCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCA‑GGTTTTTCAACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATGCGGAg > 1:4400321/1‑150 (MQ=255) tCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCA‑GGGTTTTCCACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATGCGGAg > 2:231845/1‑150 (MQ=255) tCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCA‑GGGTTTTCAACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATGCGGAg > 1:340631/1‑150 (MQ=255) aTACAGATGGTCGGCTAAAAAGACGTAAATCCCCATCCTCGCCAGAGTTTTGCTGGGATCGTCCGGCATGGGCGGGGGGTTAGCG‑GTTTTTACAACAAATTGGATATTTTTTTCTTTCTCATCAACCGCCATAACGCCAAATGCGGAGGc < 2:2359135/150‑1 (MQ=255) aTACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCA‑GGTTTTTCAACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGc > 1:4072717/1‑150 (MQ=255) tACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGTATTGACGGCGGGTTAGCA‑GGTTTTTCAACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGct > 1:1772423/1‑150 (MQ=255) cAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCA‑GGTTTTTCAACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCCAATGCGGAGGcttc > 1:2090951/1‑150 (MQ=255) cAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCA‑GGGTTTTCAACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCCAATGCGGAGGcttc > 2:321575/1‑150 (MQ=255) cAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCA‑GGGTTTTCAACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGcctc > 1:3159005/1‑150 (MQ=255) gATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCA‑GGTTTTTCAACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGcttctt > 1:3741524/1‑150 (MQ=255) aTAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCA‑GGTTTTTCAACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCttcttc > 1:1935625/1‑150 (MQ=255) aTAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAACA‑GGCTTTTCAACAAATTTGATAATTTTATCGTTCTCATCCACCGGCCTAACACCACATTGGGAGGgttcttt > 2:1732933/1‑149 (MQ=255) tAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCA‑GGGTTTTCAACGAATTCGATAATTTTATTGTTCTCTTCAACCCCCATAACGCCAAATGCGGAGGCttcttcc > 2:2854590/1‑149 (MQ=255) tAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGGTAGCA‑GGGTTTTCAACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCa > 2:549787/1‑150 (MQ=255) tCGGCGAAAAAGACGTAGACCCCCATCCGCGCGAGATTTTTGCCCGGATCGTGCGGCTTGGGGGGGGGGTGAGCG‑GTTTTTAAAACAAATTCAATATTTTTTTCTTTCCCAACACCCGCCATAACGCCAAATGCGGAGGCTTCTTCAATc < 2:3293334/150‑1 (MQ=255) cggcaaaaaaGACGAAGATCCCCATCCCCCCCAGGTTTTTCCCCGGATCTTTCGGTTTTGCGGGGGGGTTAGCT‑GTTTTTCAAACAAATTAAATATTTTTATCTTTCTAATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCg < 2:3095614/143‑1 (MQ=255) gcgaaaaaGACGTAGACCCCCATCCCCGCCAGATTTTGGCTCGGTTCGTTCGGCATGGCCGGGGGGTTAGCG‑GTTTTTCCAAAAAATTCGATATTTTTTTCGTTCCCAACAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGt < 2:2746631/145‑1 (MQ=255) cGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCA‑GGTTTTTCAACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTa > 1:4050415/1‑150 (MQ=255) tCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGCTAGGA‑AGTTTTTCAACGAATTCGATAATTTTTTCGTTCTCATCAACCGCCATAAAACCAAATGCGGAGGCGTCTTTAATTGGtgat > 2:1081326/1‑147 (MQ=255) aaaGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGGTAGGA‑GGGTTTTTAACGAAATCGATAATTTTATGGGTTTCATCAACCGCCATAACGGCAAAAGCGGAGGGTTATTCAATCGGGACTgg > 2:944775/1‑150 (MQ=255) gccGTAAATACCAATACTCCCGAGATTTTTGCTGGGTTCGTTGGGCATTGGGGGGGGGTTAGCA‑GTTTTTTAAACGAATTGTATATTTTTATCGTTCTCACCACCCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCAt < 2:2389943/148‑1 (MQ=255) aCGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCA‑GGTTTTTCAACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATa > 1:2334439/1‑150 (MQ=255) cGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCA‑GGTTTTTCAACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATAc > 1:2692783/1‑150 (MQ=255) gTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGGTAGCA‑GGTTTTTTTACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATGCGGCGGCTTTTTCAATCGGTACTGGCCTACa > 2:754171/1‑150 (MQ=255) gTAGACACCCATCCCCGCAAGAGATTTGCTCGGATCGTCCGGAATGGGGGGGGGGTTAGCA‑GTTTTTCCAACAAATTCGATATTTTTATCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACa < 2:4026915/150‑1 (MQ=255) gacccccATCCCCGCAAGATATTTGCCGGGATCGTTGGGCATGGGGGGGGGGTTGGCG‑GTTTTTCCAACAAATTCAATATTTTTGTCGTTCTCACCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGc < 2:2260865/146‑1 (MQ=255) aTACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCA‑GGTTTTTCAACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCa > 1:3666610/1‑150 (MQ=255) aTACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCA‑GGTTTTTCAACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCa > 1:455420/1‑150 (MQ=255) tACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGGTAGCA‑GGTTTTTCAACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCaa > 1:591061/1‑150 (MQ=255) aCCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCA‑GGTTTTTCAACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAAc > 1:1331691/1‑150 (MQ=255) aCCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCA‑GGGTTTTCAACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAAc > 1:1546960/1‑150 (MQ=255) tACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCA‑GGGTTTTCAACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGGATACAAGCAACGGGGc > 1:846064/1‑150 (MQ=255) tACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGGTAGCA‑GGGTTTTCAACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACCGTGc > 1:3298894/1‑150 (MQ=255) ccAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCA‑GGGTTTTTAACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATGCGGGGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTg > 2:3367830/1‑150 (MQ=255) ccAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCA‑GGGTTTTTAACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGGGGAACGTg > 2:1525364/1‑150 (MQ=255) agagATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCA‑GGGTTTTTAACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCCAATGCGGAGGGTTCTTCAATCGGTACTGGCATACAAGCAACGGGGCAACGTgcg > 2:1647326/1‑150 (MQ=255) gaTTTGCTCGGATCGTTCGGCATTGACGGCGGGGTAGCA‑GGTTTTTTAACGAATTCGATAATTTTTTCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGGTTCTTTAATCGGTACTGGCATACAAACAACCGTGCAACGTGCGCCt > 2:3621951/1‑150 (MQ=255) gCTCGGATCGTTCGGCATTGACGGCGGGTTAGCA‑GGTTCTTCAACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAAAGTGCGCCTTTTTc > 2:1907203/1‑150 (MQ=255) ccggtctCGTTCGGAATTGGCGGGGGGTGGGCA‑TTTTTTTAAACAATTTGAATATTTTTTTCGTTCCCACCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCg < 2:1826838/144‑1 (MQ=255) ggATCGTTCGGCATTGACGGCGGGTTAGCA‑GGTTTTTCAACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACg > 1:1798039/1‑150 (MQ=255) gATCGTTCGGCATTGACGGCGGGTTAGCA‑GGTTTTTCAACGAATTCGATAATTTTTTCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTTAATCGGTACTGGCATACAAGCAAAGGTGCAACGTGCGCCTTTTTCGACGt > 2:4234893/1‑150 (MQ=255) gATCGTTCGGCATGGAGGGGGGGTTAGCA‑GTTTTTTAAACAAATTCAATAATTTTATCTTTCTCAACAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGt < 2:2132490/150‑1 (MQ=255) gcGTTCGGCAGTGGCGGCGGGTTAGCA‑GGTTTTTCAACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGa < 2:1214514/149‑1 (MQ=255) gTTCGGCATTGACGGCGGGTTAGCA‑GGTTTTTCAACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATc > 2:1782652/1‑150 (MQ=255) ttCGGCATTGACGGCGGGGTAGGA‑GGGGTTTTAAAGAATTCGATAATTTTATCGTTTGGAGCAAACGGCATAACGCCAAATGGGGAGGGTTCTTTAATAGGGACTGGCATACAAGAAAAGGGGCAAAGGGCGGCTTTTTTGACGGGATCg > 2:3326573/1‑150 (MQ=255) tCGGCATTGACGGCGGGTTAGCA‑GGTTTTTCAACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGa > 1:3722568/1‑150 (MQ=255) cGGCATTGACGGCGGGTTAGCA‑GGGTTTTTAACGAATTCGATAATTTTTTCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGAt > 2:143751/1‑150 (MQ=255) gCATTGACGGCGGGTTAGCA‑GGTTTTTCAACGAATTCGATAATTTTTTCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGATaa > 2:489670/1‑150 (MQ=255) ttgggcgggggGTTAGAA‑GTTTTTAAAAAAAATTCGAAATTTTTTTCTTTCTCACCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGATAAGc < 2:4093661/145‑1 (MQ=255) gggggggggTTAGCA‑TTTTTTTCAACAAATTCGATATTTTTATCGTCCTCACCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGATAAGCATa < 2:3911184/144‑1 (MQ=255) gACGGCGGGTTAGCA‑GGGTTTTCAACGAATTCGATAATTTTATCGGTCTCATCAAACGCCCTAACGCCAAAATCGGAGGCTTCTTCAATCGGTACTGGCATACAAACAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGATAAGCATa > 2:1343905/1‑150 (MQ=255) gcggGTTAGCA‑GGTTTTTCAACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGATAAGCATAcgcg > 1:149148/1‑150 (MQ=255) ggTTAGCA‑GTTTTTTCAACGATTTCAATATTTTTATCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGATAAGCATACGCGagt < 1:2550502/150‑1 (MQ=255) ggTTAGCA‑GGTTTTTCAACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGATAAGCATACGCGagt > 2:2563562/1‑150 (MQ=255) ggTTAGCA‑GGTTTTTCAACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGATAAGCATACGCGagt > 1:3520780/1‑150 (MQ=255) gTTAGCA‑GTTTTTACAACAAATTCAATATTTTTATCTTTCTCACCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGATAAGCATACGCGagta < 1:4192974/150‑1 (MQ=255) tAGCA‑GGTTTTTCAACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGATAAGCATACGCGagtagt > 2:2178956/1‑150 (MQ=255) gCA‑GGTTTTTCAACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGATAAGCATACGCGAGTAGTct > 1:2772629/1‑150 (MQ=255) cA‑GTTTTTTCAAGGATTTCGAAAATTTTTCCGTTCTCACCACCCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGATAAGCATACGCGAGTAGTctt < 1:3835946/150‑1 (MQ=255) cA‑GGTTTTTCAACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGATAAGCATACGCGAGTAGTctt > 2:1599156/1‑150 (MQ=255) ggTTTTTCAACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGATAAGCATACGCGAGTAGTcttgc > 1:530555/1‑150 (MQ=255) | ATCAAATCTTTGCCAAAGTCGTGGCTGGAGTTCTCATCGCGATCGTCTTCTTCCAGCAGTTCATACAGATAGTCGGCGTCAAAGACGTAGATACCCATACTCGCCAGAGATTTGCTCGGATCGTTCGGCATTGACGGCGGGTTAGCA‑GGTTTTTCAACGAATTCGATAATTTTATCGTTCTCATCAACCGCCATAACGCCAAATGCGGAGGCTTCTTCAATCGGTACTGGCATACAAGCAACGGTGCAACGTGCGCCTTTTTCGACGTGATCGATAAGCATACGCGAGTAGTCTTGCTT > AP012306/3020521‑3020819 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |