| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP012306 | = 955136 | 187 (0.630) | 9 (0.030) | 8/292 | 11.2 | 4.7% | intergenic (+1265/‑1406) | mdoG/yceK | glucan biosynthesis protein, periplasmic/predicted lipoprotein |
| ? | AP012306 | = 955148 | 182 (0.620) | intergenic (+1277/‑1394) | mdoG/yceK | glucan biosynthesis protein, periplasmic/predicted lipoprotein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GCTGTCAGCAGTTCGCGACCCGCGTGTATGGGCCACTGTTTACAGCCGGTTTGCACTTCTGGCAACTTGGCGAGTCGCACTACTGGGGACATAACGCGATTATCCGCGTGAAACCGTTTATCGAGCACTGCGCACTGGCTCCGCTGCCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP012306/954985‑955136‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcAAAGGAACCTTCGCCCGGCAGCGGAGCCAGTGCGCAGTGCTCGATAAACGGTTTCACGCGGATAATCGCGTTATGTCCCCAGTAGTGCGACTCGCCAAGTTGCCAGAAGTGCAAACCGGCTGTAAACAGTGGCCCATACACGCGGGTCG < AP012306/955148‑955000 GCTGTCAGCAGTTCGCGCCCCGCGTGTATGGGCCACTGTTTACAGCCGGTTTGCACTTCTGGCAACTTGGCGAGTCGCACTACTGGGGACATAACGCGATTATCCGCGTGAAACCGTTTATCGAGCACTGCGCACTGGCTCCGCTGCCGG < 2:1058913/150‑1GCTGTCAGCAGTTCGCGACCCGCGTGTATGGGCCACTGTTTACAGCCGGTTTGCACTTCTGGCAACTTGGCGAGTCGCACTACTGGGGACATAACGCGATTATCCGCGTGAAACCGTTTATCGAGCACTGCGCACTGGCTCCGCTGCCGG < 1:2731048/150‑1 TGTCAGCAGTTCGCGACCCGCGTGTATGGGCCACTGTTTACAGCCGGTTTGCACTTCTGGCAACTTGGCGAGTCGCACTACTGGGGACATAACGCGATTATCCGCGTGAAACCGTTTATCGAGCACTGCGCACTGGCTCCGCTGCCGGGC < 1:3426074/150‑1 CAACTTGGCGAGTCGCACTACTGGGGACATAACGCGATTATCCGCGTGAAACCGTTTATCGAGCACTGCGCACTGGCTCCGCTGCCGGGCAAAGGAACCTTCGCCCGGCAGCGGAGCCAGTGCGCAGTGCTCGATAAACGGTTTTACGCG > 2:2593198/1‑150 TACTGGGGACATAACGCGATTATCCGCGTGAAACCGTTTATCGAGCACTGCGCACTGGCTCCGCTGCCGGGCAAAGGAACCTTCGCCCGGCAGCGGAGCCAGTGCGCAGTGCTCGATAAACGGTTTCACGCGGATAATCGCGTTATGTCC > 2:2191945/1‑150 CTGGGGACATAACGCGATTATCCGCGTGAAACCGTTTATCGAGCACT‑‑GCACTGGCTCCGCTGCCGGGCAAAGGAACCTTCGCCCGGCAGCGGAGCCAGTGCGCAGTGCTCGATAAACGGTTTCACGCGGATAATCGCGTTATGTCCCCAG > 2:1602054/1‑150 ATCGAGCACTGCGCACTGGCTCCGCTGCCGGGCAAAGGAACCTTCGCCCGGCAGCGGAGCCAGTGCGCAGTGCTCGATAAACGGTTTCACGCGGATAATCGCGTTATGTCCCCAGTAGTGCGACTCGCCAAGTTGCCAGAAGTGCAAACC > 2:2565488/1‑150 tGCACTGGCTCCGCTGCCGGGCAAAGGAACCTTCGCCCGGCAGCGGAGCCAGTGCGCAGTGCTCGATAAACGGTTTCACGCGGATAATCGCGTTATGTCCCCAGTAGTGCGACTCGCCAAGTTGCCAGAAGTGCAAACCGGCTGTAAACA < 1:1602054/149‑1 CACTGGCTCCGCTGCC‑GGCAAAGGAACCTTCGCCCGGCAGCGGAGCCAGTGCGCAGTGCTCGATAAACGGTTTCACGCGGATAATCGCGTTATGTCCCCAGTAGTGCGACTCGCCAAGTTGCCAGAAGTGCAAACCGGCTGTAAACAGTG > 2:3304144/1‑150 CACTGGCTCCGCTGCC‑GGCAAAGGAAACTTCGCCCGGCAGCGGAGCCAGTGCGCAGTGCTCGATAAACGGTTTCACGCGGATAATCGCGTTATGTCCCCAGTAGTGCGACTCGCCAAGTTGCCAGAAGTGCAAACCGGCTGTAAACAGTG > 2:3874030/1‑150 GCTGCCGGGCAAAGGAACCTTCGCCCGGCAGCGGAGCCAGTGCGCAGTGCTCGATAAACGGTTTCACGCGGATAATCGCGTTATGTCCCCAGTAGTGCGACTCGCCAAGTTGCCAGAAGTGCAAACCGGCTGTAAACAGTGGCCCATACA < 1:2593198/150‑1 GCCGGGCAAAGGAACCTTCGCCCGGCAGCGGAGCCAGTGCGCAGTGCTCGATAAACGGTTTCACGCGGATAATCGCGTTATGTCCCCAGTAGTGCGACTCGCCAAGTTGCCAGAAGTGCAAACCGGCTGTAAACAGTGGCCCATACACGC < 1:2191945/150‑1 GGCAAAGGAACCTTCGCCCGGCAGCGGAGCCAGTGCGCAGTGCTCGATAAACGGTTTCACGCGGATAATCGCGTTATGTCCCCAGTAGTGCGACTCGCCAAGTTGCCAGAAGTGCAAACCGGCTGTAAACAGTGGCCCATACACGCGGGT < 1:630726/150‑1 GCAAAGGAACCTTCGCCCGGCAGCGGAGCCAGTGCGCAGTGCTCGATAAACGGTTTCACGCGGATAATCGCGTTATGTCCCCAGTAGTGCGACTCGCCAAGTTGCCAGAAGTGCAAACCGGCTGTAAACAGTGGCCCATACACGCGGGTC > 1:535372/1‑150 CAAAGGAACCTTCGCCCGGCAGCGGAGCCAGTGCGCAGTGCTCGATAAACGGTTTCACGCGGATAATCGCGTTATGTCCCCAGTAGTGCGACTCGCCAAGTTGCCAGAAGTGCAAACCGGCTGTAAACAGTGGCCCATACACGCGGGTCG > 1:4441/1‑150 CAAAGGAACCTTCGCCCGGCAGCGGAGCCAGTGCGCAGTGCTCGATAAACGGTTTCACGCGGATAATCGCGTTATGTCCCCAGTAGTGCGACTCGCCAAGTTGCCAGAAGTGCAAACCGGCTGTAAACAGTGGCCCATACACGCGGGTCG > 1:3949958/1‑150 CAAAGGAACCTTCGCCCGGCAGCGGAGCCAGTGCGCAGTGCTCGATAAACGGTTTCACGCGGATAATCGCGTTATGTCCCCAGTAGTGCGACTCGCCAAGTTGCCAGAAGTGCAAACCGGCTGTAAACAGTGGCCCATACACGCGGGTCG > 1:3586786/1‑150 GCTGTCAGCAGTTCGCGACCCGCGTGTATGGGCCACTGTTTACAGCCGGTTTGCACTTCTGGCAACTTGGCGAGTCGCACTACTGGGGACATAACGCGATTATCCGCGTGAAACCGTTTATCGAGCACTGCGCACTGGCTCCGCTGCCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP012306/954985‑955136‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcAAAGGAACCTTCGCCCGGCAGCGGAGCCAGTGCGCAGTGCTCGATAAACGGTTTCACGCGGATAATCGCGTTATGTCCCCAGTAGTGCGACTCGCCAAGTTGCCAGAAGTGCAAACCGGCTGTAAACAGTGGCCCATACACGCGGGTCG < AP012306/955148‑955000 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |