| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP012306 | 1128871 = | 325 (0.970) | 6 (0.020) | 6/294 | 19.6 | 1.8% | coding (545/621 nt) | yciO | conserved protein |
| ? | AP012306 | 1128895 = | 335 (1.010) | coding (569/621 nt) | yciO | conserved protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
AACAGCCCTGCTATCAACAGCAAAATGCAGCGAAACTTCCCTGCCATAGTCTTCCATCCGTGGAACGCAATTTGTTATAAGAAAGGCTTCACATCACCTACGCCTTCACGCACCACGACCGGCGTATCATCGGTAAGATCAATAACCGTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP012306/1129021‑1128871‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgATACGCCGGTCGTGGTGCGTGAAGGCGTAGGTGATGTGAAGCCTTTCTTATAACAAATTGCGTTCCACGGATGGAAGACTATGGCAGGGAAGTTTCGCTGCATTTTGCTGTTGATAGCAGGGCTGTTTGTATCATCTCTAAGTTATGCA > AP012306/1128895‑1129043 AACAGCCCTGTTATCAACAGAAAAATGCAGGAAAACTTCCCTGCCATAGTCTTCCATCCGTGGAACGCAATTTGTTATAAGAAAGGCTTCACATCACCTACGCCTTCACGCACCACGACCGGCGTATCATCGGTAAGATCAATAACCGTT < 2:4210988/150‑1AACAGCCCTGCTATCAACAGCAAAATGCAGCGAAACTTCCCTGCCATAGTCTTCCATCCGTGGAACGCAATTTGTTATAAGAAAGGCTTCACATCACCTACGCCTTCACGCACCACGACCGGCGTATCATCGGTAAGATCAATAACCGTT > 1:4072274/1‑150AACAGCCCTGCTATCAACAGCAAAATGCAGCGAAACTTCCCTGCCATAGTCTTCCATCCGTGGAACGCAATTTGTTATAAGAAAGGCTTCACATCACCTACGCCTTCACGCACCACGACCGGCGTATCATCGGTAAGATCAATAACCGTT < 2:1751440/150‑1AACAGCCCTGCTATCAACAGCAAAATGCAGCGAAACTTCCCTGCCATAGTCTTCCATCCGTGGAACGCAATTTGTTATAAGAAAGGCTTCACATCACCTACGCCTTCACGCACCACGACCGGCGTATCATCGGTAAGATCAATAACCGTT > 2:3955766/1‑150AACAGCCCTGCTATCAACAGCAAAATGCACCAAAACTCCCCTGCCATAGTCTTCCATCCGTGGAACGCAATTTGTTATAAGAAAGGCTTCACATCACCTACGCCTTCACGCACCACGACCGGCGTATCATCGGTAAGATCAATAACCGTT < 2:734841/150‑1 ACAGCCCTGCTATCAACAACAAAATGCAGCGAAATTTCCCTGCCATAGTCTTCCATCCGTGGAACGCAATTTGTTATAAGAAAGGCTTCACATCACCTACGCCTTCACGCACCACGACCGGCGTATCATCGGTAAGATCAATAACCGTTG < 2:497934/150‑1 CCCTGCTATCAACAGCAAAATGCAGCGAAACTTCCCTGCCATAGTCTTCCATCCGTGGAACGCAATTTGTTATAAGAAAGGCTTCACATCACCTACGCCTTCACGCACCACGACCGGCGTATCATCGGTAAGATCAATAACCGTTGATAC > 1:4140025/1‑150 ATCAACAGCAAAATGCAGCGAAACTTCCCTGCCATAGTCTTCCATCCGTGGAACGCAATTTGTTATAAGAAAGGCTTCACATCACCTACGCCTTCACGCACCACGACCGGCGTATCATCGGTAAGATCAATAACCGTTGATACGCCGGTC > 1:730665/1‑150 AGCGAAACTTCCCTGCCATAGTCTTCCATCCGTGGAACGCAATTTGTTATAAGAAAGGCTTCACATCACCTACGCCTTCACGCACCACGACCGGCGTATCATCGGTAAGATCAATAACCGTTGATACGCCGGTCGTGGTGCGTGAAGGCG > 1:1327607/1‑150 CTGCCATAGTCTTCCATCCGTGGAACGCAATTTGTTATAAGAAAGGCTTCACATCACCTACGCCTTCACGCACCACGACCGGCGTATCATCGGTAAGATCAATAACCGTTGATACGCCGGTCGTGGTGCGTGAAGGCGTAGGTGATGTGA < 2:4140025/150‑1 AGTCTTCCATCCGTGGAACGCAATTTGTTATAAGAAAGGCTTCACATCACCTACGCCTTCACGCACCACGACCGGCGTATCATCGGTAAGATCAATAACCGTTGATACGCCGGTCGTGGTGCGTGAAGGCGTAGGTGATGTGAAGCCTTT < 2:730665/150‑1 GTCTTCCATCCGTGGAACGCAATTTGTTATAAGAAAGGCTTCACATCACCTACGCCTTCACGCACCACGACCGGCGTATCATCGGTAAGATCAATAACCGTTGATACGCCGGTCGTGGTGCGTGAAGGCGTAGGTGATGTGAAGCCTTTC < 2:1327607/150‑1 TGATACGCCGGTCGTGGTGCGTGAAGGCGTAGGTGATGTGAAGCCTTTCTTATAACAAATTGCGTTCCACGGATGGAAGACTATGGCAGGGAAGTTTCGCTGCATTTTGCTGTTGATAGCAGGGCTGTTTGTATCATCTCTAAGTTATGC > 1:688311/1‑150 TGATACGCCGGTCGTGGTGCGTGAAGGCGTAGGTGATGTGAAGCCTTTCTTATAACAAATTGCGTTCCACGGATGGAAGACTATGGCAGGGAAGTTTCGCTGCATTTTGCTGTTGATAGCAGGGCTGTTTGTATCATCTCTAAGTTATGC > 2:2923178/1‑150 GATACGCCGGTCGTGGTGCGTGAAGGCGTAGGTGATGTGAAGCCTTTCTTATAACAAATTGCGTTCCACGGATGGAAGACTATGGCAGGGAAGTTTCGCTGCATTTTGCTGTTGATAGCAGGGCTGTTTGTATCATCTCTAAGTTATGCA > 1:3308067/1‑150 AACAGCCCTGCTATCAACAGCAAAATGCAGCGAAACTTCCCTGCCATAGTCTTCCATCCGTGGAACGCAATTTGTTATAAGAAAGGCTTCACATCACCTACGCCTTCACGCACCACGACCGGCGTATCATCGGTAAGATCAATAACCGTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP012306/1129021‑1128871‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgATACGCCGGTCGTGGTGCGTGAAGGCGTAGGTGATGTGAAGCCTTTCTTATAACAAATTGCGTTCCACGGATGGAAGACTATGGCAGGGAAGTTTCGCTGCATTTTGCTGTTGATAGCAGGGCTGTTTGTATCATCTCTAAGTTATGCA > AP012306/1128895‑1129043 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |