| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_012967 | = 379303 | 199 (1.060) | 3 (0.020) | 3/132 | 14.0 | 1.5% | coding (737/909 nt) | mak | fructokinase |
| ? | NC_012967 | 4086375 = | 199 (1.140) | coding (425/903 nt) | fieF | CDF family cation‑efflux transporter FieF | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 202 total aligned reads displayed.
ACTGGCATTGCGTCGCTACGAGCTGCGGCTGGCAAAATCGCTGGCACATGTCGTGAATATTCTCGATCCGGATGTGATTGTCCTGGGGGGCGGGATGAGCAATGTAGACCG‑TTTATATCAAACGGTTGGGCAGTTGATTAAA > NC_012967/379232‑379373 | aCTGGCATTGCGTCGCTACGAGCTGCGGCTGTCAAAATCGCTGGCACATGTNGTGAATATTCTCGATCCGGa > 1:2509973/1‑72 (MQ=255) cTGGCATTGCGTCGCTACGAGCTGCGGCTGGCAAAATCGCTGGCACATGTCGTGAATATTCTCGATCCGGAt > 1:5071695/1‑72 (MQ=255) cTGGCATTGCGTCGCTACGACCTGCGGCTGGCAAAATCGCTGGCACATGTCGTGAATATTCTCGATCCGGAt > 2:2742012/1‑72 (MQ=255) tGGCATTGCGTCGCTACGAGCTGCGGCTGGCAAAATCGCTGGCACATGTCGTGAATATTCTCGATCCGGAtg < 1:1684534/72‑1 (MQ=255) tGGCATTGCGTCGCTACGAGCTGCGGCTGGCAAAATCGCTGGCACATGTCGTGAATATTCTCGATCCGGAtg > 1:2084407/1‑72 (MQ=255) ggCATTGCGTCGCTACGAGCTGCGGCTGGCAAAATCGCTGGCACATGTCGTGAATATTCTCGATCCGGAtgt < 1:557325/72‑1 (MQ=255) ggCATTGCGTCGCTACGAGCTGCGGCTGGCAAAATCGCTGGCACATGTCGTGAATATTCTCGATCCGGAtgt < 2:3033524/72‑1 (MQ=255) gCATGGCGTCGCTACGAGCTGCGGCTGGCAAAATCGCTGGCACATGTCGTGAATATTCTCGATCCGGAtgtg < 2:2625273/72‑1 (MQ=255) cATTGCGTCGCTACGAGCTGCGGCTGGCAAAATCGCTGGCACATGTCGTGAATATCGCCGATCCGGATGTGa > 2:313329/1‑72 (MQ=255) cATGGCGTCGCTACGAGCTGCGGCTGGCAAAATCGCTGGCACATGTCGTGAATATTCTCGATCCGGATGTGa < 2:1182031/72‑1 (MQ=255) aTTGCGTCGCTACGAGCTGCGGCTGGCAAAATCGCTGGCACATGTCGTGAATATTCTCGATCCGGATGTGAt > 1:2807108/1‑72 (MQ=255) ttGCGTCGCTACGAGCTGCGGCTGGCAAAATCGCTGGCACATGTCGTGAATATTCTCGATCCGGATGTGAtt < 1:4507621/72‑1 (MQ=255) ttGCGGCGCTACGAGCTGCGGCTGGCAAAATCGCTGGCACATGTCGTGAATAGTCTCGATCCGGATGTGAtt < 2:1890858/72‑1 (MQ=255) gCGTCGCTACGAGCTGCGGCTGGCAAAATCGCTGGCACATGTCGTGAATATTCTCGATCCGGATGTGATTGt < 1:4857610/72‑1 (MQ=255) gCGTCGCTACGAGCTGCGGCTGGCAAAATCGCTGGCACATGTCGTGAATATTCTCGATCCGGATGTGATTGt < 1:3154792/72‑1 (MQ=255) gCGTCGCTACGAGCTGCGGCTGGCAAAATCGCTGGCACATGTCGTGAATATTCTCGATCCGGATGTGATTGt < 2:4265913/72‑1 (MQ=255) tCGCTACGAGCTGCGGCTGGCAAAATCGCTGGCACATGTCGTGAATATTCTCGATCCGGATGTGATTGTCCt < 2:3921485/72‑1 (MQ=255) cGCTACGAGCTGCGGCTGGCAAAATCGCTGGCACATGTCGTGAATATTCTCGATCCGGATGTGATTGTCCTg < 1:2747229/72‑1 (MQ=255) cGCTACGAGCTGCGGCTGGCAAAATCGCTGGCACATGTCGTGAATATTCTCGATCCGGATGTGATTGTCCTg < 1:3511430/72‑1 (MQ=255) gCTACGAGCTGCGGCTGGCAAAATCGCTGGCACATGTCGTGAATATTCTCGATCCGGATGTGATTGTCCTgg < 2:5222440/72‑1 (MQ=255) gCTACGAGCTGCGGCTGGCAAAATCGCTGGCACATGTCGTGAATATTCTCGATCCGGATGTGATTGTCCTgg > 2:5593690/1‑72 (MQ=255) gCTACGAGCTGCGGCTGGCAAAATCGCTGGCACATGTCGTGAATATTCTCGATCCGGATGTGATTGTCCTgg < 1:104717/72‑1 (MQ=255) gCTACGAGCTGCGGCTGGCAAAATCGCTGGCACATGTCGTGAATATTCGCGATCCGGATGTGATTGTCCTgg < 1:4529358/72‑1 (MQ=255) cTAGGAGCTGCGGCTGGCAAAATCGCTGGCACATGTCGTGAATATTCTCGATCCGGATGTGATTGTCCTggg < 2:5348786/72‑1 (MQ=255) cTACGAGCTGCGGCTGGCAAAATCGCTGGCACATGTCGTGAATATTCTNGATCCGGATGTGATTGTCCTggg < 1:4270835/72‑1 (MQ=255) tACGAGCTGCGGCTGGCAAAATCGCTGGCACATGTCGTGAATATTCTCGATCCGGATGTGATTGTCCTgggg < 2:3053159/72‑1 (MQ=255) aCGAGCTGCGGCTGGCAAAATCGCTGGCACATGTCGTGAATATTCTCGATCCGGATGTGATTGTCCTggggg > 1:957090/1‑72 (MQ=255) cGAGCTGCGGCTGGCAAAATCGCTGGCACATGTCGTGAATATTCTCGATCCGGATGTGATTGTCCTgggggg > 1:6679023/1‑72 (MQ=255) gCTGCGGCTGGCAAAATCGCTGGCACATGTCGTGAATATTCTCGATCCGGATGTGATTGTCCTGGGGGGCgg < 2:5058368/72‑1 (MQ=255) cTGCGGCTGGCAAAATCGCTGGCACATGTCGTGAATATTCTCGATCCGGATGTGATTGTCCTGGGGGGCggg > 2:6619132/1‑72 (MQ=255) cTGCGGCTGGCAAAATCGCTGGCACATGTCGTGAATATTCTCGATCCGGATGTGATTGTCCTGGGGGGCggg > 2:1435815/1‑72 (MQ=255) gCGGCTGGCAAAATCGCTGGCACATGTCGTGAATATTCTCGATCCGGATGTGATTGTCCTGGGGGGCGGGAt < 2:4938501/72‑1 (MQ=255) gCGGCTGGCAAAATCGCTGGCACATGTCGTGAATATTCTCGATCCGGATGTGATTGTCCTGGGGGGCGGGAt < 2:6505226/72‑1 (MQ=255) cGGCTGGCAAAATCGCTGGCACATGTCGTGAATATTCTCGATCCGGATGTGATTGTCCTGGGGGGCGGGATg < 2:937722/72‑1 (MQ=255) cGGCTGGCAAAATCGCTGGCACATGTCGTGAATATTCTCGATCCGGATGTGATTGTCCTGGGGGGCGGGATg < 2:3617999/72‑1 (MQ=255) ggCTGGCAAAATCGCTGGCACATGTCGTGAATATTCTCGATCCGGATGTGATTGTCCTGGGGGGCGGGATGa > 2:5788461/1‑72 (MQ=255) ggCTGGCAAAATCGCTGGCACATGTCGTGAATATTCTCGATCCGGATGTGATTGTCCTGGGGGGCGGGATGa < 2:5633216/72‑1 (MQ=255) ggCTGGCAAAATCGCTGGCACATGTCGTGAATATTCTCGATCCGGATGTGATTGTCCTGGGGGGCGGGATGa > 2:4809303/1‑72 (MQ=255) gCTGGCAAAATCGCTGGCACATGTCGTGAATATTCTCGATCCGGATGTGATTGTCCTGGGGGGCGGGATGAg < 2:5280846/72‑1 (MQ=255) cTGGCAAAATCGCTGGCACATGTCGTGAATATTCTCGATCCGGATGTGATTGTCCTGGGGGGCGGGATGAGc < 2:2173704/72‑1 (MQ=255) ttgCAAAATCGCTGGCACATGTCGTGAATATTCTCGATCCGGATGTGATTGTCCTGGGGGGCGGGATGAGCa < 2:1642600/70‑1 (MQ=255) tGGCAAAATCGCTGGCACATGTCGTGAATATTCTCGATCCGGATGTGATTGTCCTGGGGGGCGGGATGAGCa < 1:6382560/72‑1 (MQ=255) ggCAAAATCGCTGGCACATGTCGTGAATATTCTCGATCCGGATGTGATTGTCCTGGGGGGCGGGATGAGCaa > 1:6066815/1‑72 (MQ=255) ggCAAAATCGCTGGCACATGTCGTGAATATTCTCGATCCGGATGTGATTGTCCTGGGGGGCGGGATGAGCaa > 2:4408163/1‑72 (MQ=255) gCAAAATCGCTGGCACATGTCGTGAATATTCTCGATCCGGATGTGATTGTCCTGGGGGGCGGGATGAGCAAt < 1:3843936/72‑1 (MQ=255) gCAAAATCGCTGGCACATGTCGTGAATATTCTCGATCCGGATGTGATTGTCCTGGGGGGCGGGATGAGCAAt < 2:3351398/72‑1 (MQ=255) gCAAAATCGCTGGAGCATGTCGTTAATATTCTCGATCCGGATGTGATTGTCCTGGGGGGCGGGATGAGCAAt < 1:42056/72‑1 (MQ=255) cAAAATCGCTGGCACATGTCTTGAATATTCTCGATCCGGATGTGATTGTCCTGGGGGGCGGGATGAGCAATg < 2:693913/72‑1 (MQ=255) cAAAATCGCTGGCACATGTCGTGAATATTCTCGATCCGGATGTGATTGTCCTGGGGGGCGGGATGAGCAATg < 1:4324255/72‑1 (MQ=255) cAAAATCGCTGGCACATGTCGTGAATATTCTCGATCCGGATGTGATTGTCCTGGGGGGCGGGATGAGCAATg > 1:3101291/1‑72 (MQ=255) cAAAATCGCTGGCACATGTCGTGAATATTCTCGATCCGGATGTGATTGTCCTGGGGGGCGGGATGAGCAATg > 1:4465633/1‑72 (MQ=255) cAAAATCGCTGGCACATGTCGTGAATATTCTCGATCCGGATGNGATTGTCCTGGGGGGCGGGATGAGCAAta < 2:568996/72‑2 (MQ=255) aaaaTCGCTGGCACATGTCGTGAATATTCTCGATCCGGATGTGATTGTCCTGGGGGGCGGGATGAGCAATGt < 2:4222025/72‑1 (MQ=255) aaaaTCGCTGGCACATGTCGTGAATATTCTCGATCCGGATGTGATTGTCCTGGGGGGCGGGATGAGCAATGt < 2:1527476/72‑1 (MQ=255) aaaaTCGCTGGCACATGTCGTGAATATTCTCGATCCGGATGTGATTGTCCTGGGGGGCGGGATGAGCAATGt < 1:1239411/72‑1 (MQ=255) aTCGCTGGCACATGTCGTGAATATTCTCGATCCGGATGTGATTGTCCTGGGGGGCGGGATGAGCAATGTAGa > 2:4765961/1‑72 (MQ=255) tCGCTGGCACATGTCGTGAATATTCTCGATCCGGATGTGATTGTCCTGGGGGGCGGGATGAGCAATGTAGAc < 2:5867623/72‑1 (MQ=255) tCGCTGGCACATGTCGTGAATATTCTCGATCCGGATGTGATTGTCCTGGGGGGCGGGATGAGCAATGTAGAc < 2:6053182/72‑1 (MQ=255) cGCTGGCACATGTCGTGAATATTCTCGATCCGGATGTGATTGTCCTGGGGGGCGGGATGAGCAATGTAGAcc < 1:1535690/72‑1 (MQ=255) cTGGCACATGTCGTGAATATTCTCGATCCGGATGTGATTGTCCTGGGGGGCGGGATGAGCAATGTAGAcgct > 2:859295/1‑69 (MQ=255) cTGGCACATGTCGTGAATATTCTCGATCCGGATGTGATTGTCCTGGGGGGCGGGATGAGCAATGTAGACCG‑t < 2:6440804/72‑1 (MQ=255) tGGCACATGTCGTGAATATTCTCGATCCGGATGTGATTGTCCTGGGGGGCGGGATGAGCAATGTAGACCggt > 1:2153544/1‑70 (MQ=255) tGGCACATGTCGTGAATATTCTCGATCCGGATGTGATTGTCCTGGGGGGCGGGATGAGCAATGTAGACCG‑tt > 1:5276213/1‑72 (MQ=255) gCACATGTCGTGAATATTCTCGATCCGGATGTGATTGTCCTGGGGGGCGGGATGAGCAATGTAGACCG‑TTta > 1:508482/1‑72 (MQ=255) cacaTGTCGTGAATATTCTCGATCCGGATGTGATTGTCCTGGGGGGCGGGATGAGCAATGTAGACCG‑TTtat > 1:6522882/1‑72 (MQ=255) cacaTGTCGTGAATATTCTCGATCCGGATGTGATTGTCCTGGGGGGCGGGATGAGCAATGTAGACCG‑TTtat < 1:1365796/72‑1 (MQ=255) cacaTGTCGTGAATATTCTCGATCCGGATGTGATTGTCCTGGGGGGCGGGATGAGCAATGTAGACCG‑TTtat > 1:3197465/1‑72 (MQ=255) acaTGTCGTGAATATTCTCGATCCGGATGTGATTGTCCTGGGGGGCGGGATGAGCAATGTAGACCG‑tttttt > 1:5683407/1‑69 (MQ=255) caTGTCGTGAATATTCTCGATCCGGATGTGATTGTCCTGGGGTGCGGGATGAGCAATGTAGACCG‑TTTatat < 1:4649279/72‑1 (MQ=255) caTGTCGTGAATATTCTCGATCCGGATGTGATTGTCCTGGGGGGCGGGATGAGCAATGTAGACCG‑GTTttat > 1:4079210/1‑72 (MQ=255) aTGTCGTGAATATTCTCGATCCGGATGTGATTGTCCTGGGGGGCGGGATGAGCAATGTAGACCG‑GTTATATc > 2:3312696/1‑72 (MQ=255) tGTCGTGAATATTCTCGATCCGGATGTGATTGTCCTGGGGGGCGGGATGAGCAATGTAGACCG‑TTTATATCa < 2:1416655/72‑1 (MQ=255) tGTCGTGAATATTCTCGATCCGGATGTGATTGTCCTGGGGGGCGGGATGAGCAATGTAGACCG‑TTTATATCa < 1:5992140/72‑1 (MQ=255) gTCGTGAATATTCTCGATCCGGATGTGATTGTCCTGGGGGGCGGGATGAGCAATGTAGACCG‑TTTATATCaa > 1:1865194/1‑72 (MQ=255) cGTGAATATTCTCGATCCGGATGTGATTGTCCTGGGGGGCGGGATGAGCAATGTAGACCG‑TTTATATCAAAc > 2:5102232/1‑72 (MQ=255) gAATATTCTCGATCCGGATGTGATTGTCCTGGGGGGCGGGATGAGCAATGTAGACCG‑TTTATATCAAACGGt < 2:4577850/72‑1 (MQ=255) aaTATTCTCGATCCGGATGTGATTGTCCTGGGGGGCGGGATGAGCAATGTAGACCG‑TTTATATCAAACGGtt < 2:3742897/72‑1 (MQ=255) aaTATTCTCGATCCGGATGTGATTGTCCTGGGGGGCGGGATGAGCAATGTAGACCG‑CTCATATACAACGGtt > 2:3493605/1‑72 (MQ=255) atatTCTCGATCCGGATGTGATTGTCCTGGGGGGCGGGATGAGCAATGTAGACCG‑TTTATATCAAACGGTTg < 2:2960161/72‑1 (MQ=255) atatTCTCGATCCGGATGTGATTGTCCTGGGGGGCGGGATGAGCAATGTAGACCG‑TTTATATCAAACGGGTg > 1:6243782/1‑72 (MQ=255) tatTCTCGATCCGGATGTGATTGTCCTGGGGGGCGGGATGAGCAATGTAGACCG‑TTTATATCAAACGGTTgg < 2:4488443/72‑1 (MQ=255) tatTCTCGATCCGGATGTGATTGTCCTGGGGGGCGGGATGAGCAATGTAGACCG‑TTTATATCAAACGGTTgg < 2:6227287/72‑1 (MQ=255) atTCTCGATCCGGATGTGATTGTCCTGGGGGGCGGGATGAGCAATGTAGACCG‑TTTATATCAAACGGTTggg < 2:3817131/72‑1 (MQ=255) ttCTCGATCCGGATGTGATTGTCCTGGGGGGCGGGATGAGCAATGTAGACCG‑TGTATATTAAACGGTTgggg > 2:3212827/1‑71 (MQ=255) tctcGATCCGGATGTGATTGTCCTGGGGGGCGGGATGAGCAATGTAGACCG‑TTTATATCACAAGGTTggggg > 2:1319811/1‑70 (MQ=255) tcGATCCGGATGTGATTGTCCTGGGGGGCGGGATGAGCAATGTAGACCGTTTTNTTTAAAACGTTTgggggt > 1:2568964/1‑69 (MQ=255) tcGATCCGGATGTGATTGTCCTGGGGGGCGGGATGAGCAATGTAGACCG‑TTTATATCAAACGGTTGGGGAgg > 1:3458974/1‑71 (MQ=255) tcGATCCGGATGTGATTGTCCTGGGGGGCGGGATGAGCAATGTAGACCG‑TTTATATCAAACGGTTGGGCAGt < 1:2867317/72‑1 (MQ=255) tcGATCCGAATTGGCTTGTCCAGGGAGGCGGAATGAGCAATGTAGACCG‑TTTATATCAAACGGTTGGGCAGt < 2:1503616/72‑1 (MQ=255) cGATCCGGATGTGATTGTCCTGGGGGGCGGGATGAGCAATGTAGACCG‑TTTATATCAAACGGTTGGGCAGtt < 1:4943491/72‑1 (MQ=255) cGATCCGGATGTGATTGTCCTGGGGGGCGGGATGAGCAATGTAGACCG‑TTTATATCAAACGGTTGGGCAGtt < 1:3351473/72‑1 (MQ=255) cGATCCGGATGTGATTGTCCTGGGGGGCGGGATGAGCAATGTAGACCG‑TTTATATCAAACGGTTGGGCAGtt < 1:5423461/72‑1 (MQ=255) cGATCCGGATGTGATTGTCCTGGGGGGCGGGATGAGCAATGTAGACCG‑TTTATATCAAACGGTTGGGCAGtt < 1:789146/72‑1 (MQ=255) gATCCGGATGTGATTGTCCTGGGGGGCGGGATGAGCAATGTAGACCG‑TTTATATCACACGGTTGGGCAGTTg > 2:6615214/1‑72 (MQ=255) gATCCGGATGTGATTGTCCTGGGGGGCGGGATGAGCAATGTAGACCG‑TTTATATCAACAGGTTGCGCAGtag > 1:1219226/1‑70 (MQ=255) gATCCGGATGTGATTGTCCTGGGGGGCGGGATGAGCAATGTAGACCG‑TTTATATCAAANGGTTGGGCAGTTg < 1:2107435/72‑1 (MQ=255) aTCCGGATGTGATTGTCCTGGGGGGCGGGATGAGCAATGTAGACCG‑GTTATATCAAACGGTTGGGGAGTTgg > 2:6010748/1‑71 (MQ=255) cGGATGTGATTGTCCTGGGGNGCGGGATGAGCAATGTAGACCG‑TTTATATCAAACGGTTGGGCAGTTGANTa < 2:616938/72‑1 (MQ=255) cGGATGTGATTGTCCTGGGGGGCGGGATGAGCAATGTAGACCG‑TTTATATCAAACGGTTGGGCAGTTGATTa < 1:4778275/72‑1 (MQ=255) ggATGTGATTGTCCTGGGGGGCGGGATGAGCAATGTAGACCG‑TTTATATCAAACGGTTGGGCAGTTGATTaa < 1:3735972/72‑1 (MQ=255) | ACTGGCATTGCGTCGCTACGAGCTGCGGCTGGCAAAATCGCTGGCACATGTCGTGAATATTCTCGATCCGGATGTGATTGTCCTGGGGGGCGGGATGAGCAATGTAGACCG‑TTTATATCAAACGGTTGGGCAGTTGATTAAA > NC_012967/379232‑379373 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |