| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_012967 | = 2286543 | 203 (0.940) | 3 (0.010) | 3/134 | 21.2 | 1.7% | coding (277/723 nt) | ubiG | bifunctional 3‑demethylubiquinone 3‑O‑methyltransferase/2‑octaprenyl‑6‑hydroxy phenol methylase |
| ? | NC_012967 | = 4385857 | 165 (0.810) | coding (1049/2442 nt) | rnr | ribonuclease R | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 205 total aligned reads displayed.
TCTGGCCGAGAGTATGGCGCGCGAAGGC‑GCGACGGTGACCGGTCTGGATATGGGCTTTGAGCCATTGCAGGTGGCAAAACTGCACGCGCTGGAAAGCGGCATTCAGGTGGATTATGTGCAGGAAACCGTGGAAGAGCACGC > NC_012967/2286473‑2286613 | tCTGGCCGAGAGTATGGCGCGCGAAGGC‑GCGACGGTGACCGGTCTGGATATGGGCTTTGAGCCATTGCAggg > 1:2158612/1‑71 (MQ=255) cTGGCCGAGAGTATGGCGCGCGAAGGC‑GCGACGGTGACCGGTCTGGATATGGGCTTTGAGCCATTGCAGGTg > 1:6377044/1‑72 (MQ=255) cTGGCCGAGAGTATGGCGCGCGAAGGC‑GCGACGGTGACCGGTCTGGATATGGGCTTTGAGCCATTGCAGGTg > 1:6074614/1‑72 (MQ=255) gggCGGAGGGTAGGGCGCGCGAAGGC‑GCGACGGTGACCGGTCTGGATATGGGCTTTGAGCCATTGCAGGTgg < 1:7124265/71‑1 (MQ=255) gggCCGAGGGTGGGGCGCGCGAGGGC‑GCGACGGTGACCGGTCTGGATATGGGCTTTGAGCCATTGCAGGTgg < 2:3661230/71‑1 (MQ=255) ggCCGAGAGTATGGCGCGCGAAGGC‑GCGACGGTGCACGGGCTGGATATGGGCGTTGAGCCATTGCAggcggc > 2:3448539/1‑72 (MQ=255) ccGAGAGTATGGCGCGCGAAGGC‑GCGACGGTGACCGGTCTGGATATGGGCTTTGAGCCATTGCAGGTGGCaa > 1:2206806/1‑72 (MQ=255) cGAGAGTATGGCGCGCGAAGGC‑GCGACGGTGACCGGTCTGGATATGGGCTTTGAGCCATTGCAGGTGGCaaa < 1:5381399/72‑1 (MQ=255) gagaGTATGGCGCGCTAAGGC‑GCGACGGTGACCGGTCTGGATATGGGCTTTGAGCCATTGCAGGTGGCaaaa > 1:6788225/1‑72 (MQ=255) agagTATGGCGCGCGAAGGC‑GCGACGGTGACCGGTCTGGATATGGGCTTTGAGCCATTGCAGGTGGCAAAAc < 1:6262272/72‑1 (MQ=255) gagTATGGCGGGCGAAGGC‑GCGACGGTGACCGGTCTGGATATGGGCTTTGAGCCATTGCAGGTGGCAAAACt > 1:469822/1‑72 (MQ=255) gagTATGGCGCGCGAAGGC‑GCGACGGTGACCGGTCTGGATATGGGCTTTGAGCCATTGCAGGTGGCAAAACt > 1:2027351/1‑72 (MQ=255) gagTATGGCGCGCGAAGGC‑GCGACGGTGACCGGTCTGGATATGGGCTTTGAGCCATTGCAGGTGGCAAAACt < 2:6914288/72‑1 (MQ=255) gagTATGGCCCGCGAAGGC‑GCGACGGTGACCGGTCTGGATATGGGCTTTGAGCCATTGCAGGTGGCAAAAca > 2:244421/1‑71 (MQ=255) gagTAGGGCGCGCGAAGGC‑GCGACGGTGACCGGTCTGGATATGGGCTTTGAGCCATTGCAGGTGGCAAAACt < 1:385303/72‑1 (MQ=255) ggTAGGGCGCGCGAGGGC‑GCGACGGTGACCGGTCTGGATATGGGCTTTGAGCCATTGCAGGTGGCAAAACTg < 1:1589573/71‑1 (MQ=255) agTATGGCGCGCGAAGGC‑GCGACGGTGACCGGTCTGGATATGGGCTTTGAGCCATTGCAGGTGGCAAAACTg > 2:6197297/1‑72 (MQ=255) gaTGGCGCGCGAAGCC‑GCGACGGTGACCGGTCTGGATATGGGCTTTGAGCCATTGCAGGTGGCAAAACTGCa < 2:5199434/71‑1 (MQ=255) aTGGCGCGCGAAGGC‑GCGACGGTGACCGGTCTGGATATGGGCTTTGAGCCATTGCAGGTGGCAAAACTGCAc > 2:1763525/1‑72 (MQ=255) tGGCGCGCGAAGGC‑GCGACGGTGACCGGTCTGGATATGGGCTTTGAGGCATTGCAGGGGGCAAAACTGCAcg > 2:7194642/1‑72 (MQ=255) tGGCGCGCGAAGGC‑GCGACGGTGACCGGTCTGGANATGGGCTTTGAGCCATTGCAGGTGGCAAAACTGCAcg > 1:395696/1‑72 (MQ=255) tGGCGCGCGAAGCC‑GCAACGGTGACCGGTCTGGATATGGGCTTTGAGCCATTGCAGGTGGCAAAACTGCAcg < 2:1573937/72‑1 (MQ=255) gcgcgcGAGGGC‑GCGACGGTGACCGGTCTGGATATGGGCTTTGAGCCATTGCAGGTGGCAAAACTGCAcgcg < 2:2163081/72‑1 (MQ=255) cgcgcgAGGGC‑GCGACGGTGACCGGTCTGGATATGGGCTTTGAGCCATTGCAGGTGGCAAAACTGCACgcgc < 2:3189164/72‑1 (MQ=255) cgcgcgAAGGC‑GCGACGGTGACCGGTCTGGATATGGGCTTTGAGCCATTGCAGGTGGCAAAACTGCACgcgc > 1:3810195/1‑72 (MQ=255) gcgcgAAGGC‑GCGACGGTGACCGGTCTGGATATGGGCTTTGAGCCATTGCAGGTGGCAAAACTGCACGCGCt > 1:3495289/1‑72 (MQ=255) cgcgAAGGC‑GCGACGGTGACCGGTCTGGATATGGGCTTTGAGCCATTGCAGGTGGCAAAACTGCACGCGCTg > 2:4265855/1‑72 (MQ=255) gggAAGGCAGCGGCGGTGACCGGTCTGGATATGGGCTTTGAGCCATTGCAGGTGGCAAAACTGCACGCGCTg < 1:4616814/70‑1 (MQ=255) gcgAAGGC‑GCGACGGTGACCGGTCTGGATATGGGCTTTGAGCCATTGCAGGTGGCAAAACTGCACGCGCTgg > 2:1107943/1‑72 (MQ=255) gcgAAGGC‑GCGACGGTGACCGGTCTGGATATGGGCTTTGAGCCATTGCAGGTGGCAAAACTGCACGCGCTgg > 1:3630284/1‑72 (MQ=255) gcgAAGGC‑GCGACGGTGACCGGTCTGGATATGGGCTTTGAGCCATNGCAGGTGGCAAAACTGCACGCGCCgg > 2:803470/1‑72 (MQ=255) gAAGGC‑GCGACGGTGACCGGTCTGGATATGGGCTTTGAGCCATTGCAGGTGGCAAAACTGCACGCGCTGGaa > 2:5279652/1‑72 (MQ=255) agggC‑GCGACGGTGACCGGTCTGGATATGGGCTTTGAGCCATTGCAGGTGGCAAAACTGCACGCGCTGGaaa < 2:1911603/70‑1 (MQ=255) aaGGC‑GCGACGGTGACCGGTCTGGATATGGGCTTTGAGCCATTGCAGGTGGCAAAACTGCACGCGCTGGaaa < 1:992082/72‑1 (MQ=255) aaGGC‑GCGACGGTGACCGGTCTGGATATGGGCTTTGAGCCATTGCAGGTGGCAAAACTGCACGCGCTGGaaa > 1:6602790/1‑72 (MQ=255) gggC‑GCGACGGTGACCGGTCTGGATATGGGCTTTGAGCCATTGCAGGTGGCAAAACTGCACGCGCTGGAAAg < 1:2673925/71‑1 (MQ=255) aGGC‑GCGACGGTGACCGGTCTGGATATGGGCTTTGAGCCATTGCAGGTGGCAAAACTGCACGCGCTGGAAAg > 1:4757955/1‑72 (MQ=255) aGGC‑GCGACGGTGACCGGTCTGGATATGGGCTTTGAGCCATTGCAGGTGGCAAAACTGCACGCGCTGGAAAg < 1:7289470/72‑1 (MQ=255) aGGC‑GCGACGGTGACAGGTCTGGATATGGGCTTTGAGCCATTGCAGGTGGCAAAACTGCACGCGCTGGAAAg > 2:4362147/1‑72 (MQ=255) ggC‑GCGACGGTGACCGGTCTGGATATGGGCTTTGAGCCATTGCAGGTGGCAAAACTGCACGCGCTGGAAAGc < 1:298025/72‑1 (MQ=255) gcgACGGTGACCGGTCTGGATATGGGCTTTGAGCCATTGCAGGTGGCAAAACTGCACGCGCTGGAAAGCGGc < 2:3698452/72‑1 (MQ=255) cgACGGTGACCGGTCTGGATATGGGCTTTGAGCCATTGCAGGTGGCAAAACTGCACGCGCTGGAAAGCGGCa < 2:7071439/72‑1 (MQ=255) cgACGGTGACCGGTCTGGATATGGGCTTTGAGCCATTGCAGGTGGCAAAACTGCACGCGCTGGAAAGCGGCa < 1:341113/72‑1 (MQ=255) gACGGTGACCGGTCTGGATATGGGCTTTGAGCCATTGCAGGTGGCAAAACTGCACGCGCTGGAAAGCGGCAt > 1:5847307/1‑72 (MQ=255) gACGGTGACCGGTCTGGATATGGGCTTTGAGCCATTGCAGGTGGCAAAACTGCACGCGCTGGAAAGCGGCAt > 1:6481329/1‑72 (MQ=255) aaaggTGACCGGTGTGGATATGGGCTTTGAGCCATTGCAGGTGGCAAAACTGCACGCGCTGGAAAGCGGAAt < 1:2720461/69‑1 (MQ=255) aCGGTGACCGGTCTGGATATGGGCTTTGAGCCATTGCAGGTGGCAAAACTGCACGCGATGGAAAGCGGCAtt > 2:2994080/1‑72 (MQ=255) ggTGACCGGTCTGGATATGGGCTTTGAGCCATTGCAGGTGGCAAAACTGCACGCGCTGGAAAGCGGCATTCa < 2:5882652/72‑1 (MQ=255) ggTGACCGGTCTGGATATGGGCTTTGAGCCATTGCAGGTGGCAAAACTGCACGCGCTGGAAAGCGGCATTCa < 1:3924993/72‑1 (MQ=255) gTGACCGGTCTGGATATGGGCTTTGAGCCATTGCAGGTGGCAAAACTGCACGCGCTGGAAAGCGGNATTCAg > 2:509401/1‑72 (MQ=255) gTGACCGGTCTGGATATGGGCTTTGAGCCATTGCAGGTGGCAAAACTGCACGCGCTGGAAAGCGGCATTCAg < 1:2303109/72‑1 (MQ=255) gACCGGTCTGGATATGGGCTTTGAGCCATTGCAGGTGGCAAAACTGCACGCGCTGGAAAGCGTCATTCAGGt > 1:2446737/1‑72 (MQ=255) gACCGGTCTGGATATGGGCTTTGAGCCATTGCAGGTGGCAAAACTGCACGCGCTGGAAAGCGGCATTCAGGt > 1:7147723/1‑72 (MQ=255) gACCGGTCTGGATATGGGCTTTGAGCCATTGCAGGTGGCAAAACTGCACGCGCTGGAAAGCGGCATTCAGGt > 2:1225491/1‑72 (MQ=255) gACCGGTCTGGATATGGGCTTTGAGCCATTGCAGGTGGCAAAACTGCACGCGCTGGAAAGCGGCATTCAGGt < 2:2372927/72‑1 (MQ=255) cGGTCTGGATATGGGCTTTGAGCCATTGCAGGTGGCAAAACTGCACGCGCTGGAAAGCGGCATTCAGGTGGa < 2:7134146/72‑1 (MQ=255) cGGTCTGGATATGGCCTTTGAGCCATTGCAGGTGGCAAAACTGCACGCGCTGGAAAGCGGCATTCAGGTGGa > 1:3722977/1‑72 (MQ=255) ggTCTGGATATGGGCTTTGAGCCATTGCAGGTGGCAAAACTGCACGCGCTGGAACGCGGCATTCAGGCGGAt > 2:5409619/1‑72 (MQ=255) gTCTGGATATGGGGTTTGAGCCATTGCAGGTGGCAAAACTGCACGCGCTGGAAAGCGGCATTCAGGTGGAtt > 1:3029710/1‑72 (MQ=255) gTCTGGATATGGGCTTTGAGCCATTGCAGGTGGCAAAACTGCACGCGCTGGAAAGCGGCATTCAGGTGGAtt < 2:6844190/72‑1 (MQ=255) gTCTGGATATGGGCTTTGAGCCATTGCAGGTGGCAAAACTGCACGCGCTGGAAAGCGGCATTCAGGTGGAtt < 2:3100795/72‑1 (MQ=255) tGGATATGAGCTTTGAGCCAATGCAGGTGGCAAAACTGCACGCGCTGGAAAGCGGCATTCAGGTGGATTAtg < 1:2849148/72‑1 (MQ=255) ggATATGGGCTTTGAGCCATTGCAGGTGGCAAAACTGCACGCGCTGGAAAGCGGCATTCAGGTGGATTAtgt > 2:7442433/1‑72 (MQ=255) ggATATGGGCTTTGAGCCATTGCAGGTGGCAAAACTGCACGCGCTGGAAAGCGGCATTCAGGTGGATTAtgt > 1:4911309/1‑72 (MQ=255) ggATATGGGCTTTGAGCCATTGCAGGNGGCAAAACTGCACGCGCTGGAAAGCGGCATTCAGGTGGATTAtgt < 1:506396/72‑1 (MQ=255) atatGGGCTTTGAGCCATTGCAGGTGGCAAAACTGCACGCGCTGGAAAGCGGCNTTCAGGTGGATTATGTGc > 1:2898380/1‑72 (MQ=255) atatGGGCTTTGAGCCATTGCAGGTGGCAAAACTGCACGCGCTGGAAAGCGGCATTCAGGTGGATTATGTGc > 1:2584539/1‑72 (MQ=255) attggCTTTGAGCCATTGCAGGTGGCAAAACTGCACGCGCTGGAAAGCGGCATTCAGGTGGATTATGTGCAg > 2:3752577/4‑72 (MQ=255) tGGGCTTTGAGCCATTGCAGGTGGCAAAACTGCACGCGCTGGAAAGCGGCATTCAGGTGGATTATGTGCAgg < 1:7324144/72‑1 (MQ=255) gggCTTTGAGCCATTGCAGGTGGCAAAACTGCACGCGCTGGAAAGCGGCATTCAGGTGGATTATGTGCAGGa > 2:6080802/1‑72 (MQ=255) ggCTTTGAGCCATTGCAGGTGGCAAAACTGCACGCGCTGGAAAGCGGCATTCAGGTGGATTATGTGCAGGaa < 1:5243259/72‑1 (MQ=255) gCTTTGAGCCATTGCAGGTGGCAAAACTGCACGCGCTGGAAAGCGGCATTCAGGTGGATTATGTGCNGGaaa < 2:396499/72‑1 (MQ=255) gCTTTGAGCCATTGCAGGTGGCAAAACTGCACGCGCTGGAAAGCGGCATTCAGGTGGATTATGTGCAGGaaa > 1:1508874/1‑72 (MQ=255) gCTTTGAGCCATTGCAGGTGGCAAAACTGCACGCGCTGGAAAGCGGCATTCAGGTGGATTATGTGCAGGaaa > 1:6517619/1‑72 (MQ=255) cTTTGAGCCATTGCAGGTGGCAAAACTGCACGCGCTGGAAAGCGGCATTCAGGTGGATTATGTGCAGGAAAc < 1:5030890/72‑1 (MQ=255) tttGAGCCATTGCAGGTGGCAAAACTGCACGCGCTGGAAAGCGGCATTCAGGTGGATTATGTGCAGGAAAcc > 1:5788462/1‑72 (MQ=255) tttGAGCCATTGCAGGTGGCAAAACTGCACGCGCTGGAAAGCGGCATTCAGGTGGATTATGTGCAGGAAAcc < 1:1440629/72‑1 (MQ=255) gAGCCATTGCAGGTGNCAAAACTGCACGCGCTGGAAAGCGGCATTCAGGTGGATTATGTGCAGGAAACCGTg > 2:731845/1‑72 (MQ=255) aGCCATTGCAGGTGGCAAAACTGCACGCGCTGGAAAGCGGCATTCAGGTGGATTATGTGCAGGAAACCGTgg > 2:4086962/1‑72 (MQ=255) aGCCATTGCAGGTGGCAAAACTGCACGCGCTGGAAAGCGGCATTCAGGTGGATTATGTGCAGGAAACCGTgg > 1:3292827/1‑72 (MQ=255) aGCCATTGCAGGTGGCAAAACTGCACGCGCTGGAAAGCGGCATTCAGGTGGATTATGTGCAGGAAACCGTgg < 2:5612548/72‑1 (MQ=255) gCCATTGCAGGTGGCAAAACTGCACGCGCTGGAAAGCGGCATTCAGGTGGATTATGTGCAGGAAACCGTGGa < 1:701038/72‑1 (MQ=255) gCCATTGCAGGTGGCAAAACTGCACGCGCTGGAAAGCGGCATTCAGGTGGATTATGTGCAGGAAACCGTGGa > 1:4236889/1‑72 (MQ=255) ccATTGCAGGTGGCAAAACTGCACGCGCTGGAAAGCGGCATTCAGGTGGATTATGTGCAGGAAACCGTGGaa > 1:5532366/1‑72 (MQ=255) ccATTGCAGGTGGCAAAACTGCACGCGCTGGAAAGCGGCATTCAGGTGGATTATGTGCAGGAAACCGTGGaa > 1:5104083/1‑72 (MQ=255) cATTGCAGGTGGCAAAACTGCACGCGCTGGAAAGCGGCATTCAGGTGGATTATGTGCAGGAAACCGTGGAag > 1:3062647/1‑72 (MQ=255) cATTGCAGGTGGCAAAACTGCACGCGCTGGAAAGCGGCATTCAGGTGGATTATGTGCAGGAAACCGTGGAag < 2:4821917/72‑1 (MQ=255) cATTGCAGGTGGCAAAACTGCACGCGCTGGAAAGCGGCATTCAGGTGGATTATGTGCAGGAAACCGTGGAag > 1:5459674/1‑72 (MQ=255) cATTGCAGGTGGCAAAACTGCACGCGCTGGAAAGCGGCATTCAGGTGGATTATGTGCAGGAAACCGTGGAag > 1:7211697/1‑72 (MQ=255) aTTGCAGGTGGCAAAACTGCACGCGCTGGAAAGCGGCATTCAGGTGGATTATGTGCAGGAAACCGTGGAaga > 1:1066125/1‑72 (MQ=255) aTTGCAGGTGGCAAAACTGCACGCGCTGGAAAGCGGCATTCAGGTGGATTATGTGCAGGAAACCGTGGAaga < 1:618608/72‑1 (MQ=255) aTTGCAGGTGGCAAAACTGCACGCGCTGGAAAGCGGCATTCAGGTGGATTATGTGCAGGAAACCGTGGAaga > 2:3287389/1‑72 (MQ=255) ttGCAGGTGGCAAAACTGCACGCGCTGGAAAGCGGCATTCAGGTGGATTATGTGCAGGAAACCGTGGAagag > 2:7251501/1‑72 (MQ=255) gCAGGTGGCAAAACTGCACGCGCTGGAAAGCGGCATTCAGGTGGATTATGTGCAGGAAACCGTGGAAGAGCa < 2:6444751/72‑1 (MQ=255) caagTGGCAAAACTGCACGCGCTGGAAAGCGGCATTCAGGTGGATTATGTGCAGGAAACCGTGGAAGAGCAc < 1:1834008/69‑1 (MQ=255) cAGGTGGCAAAACTGCACGCGCTGGAAAGCGGCATTCAGGTGGATTATGTGCAGGAAACCGTGGAAGAGCAc < 1:5422691/72‑1 (MQ=255) cAGGTGGCAAAACTGCACGCGCTGGAAAGCGGCATTCAGGTGGATTATGTGCAGGAAACCGTGGAAGAGCAc > 2:4018874/1‑72 (MQ=255) aGGTGGCAAAACTGCACGCGCTGGAAAGCGGCATTCAGGTGGATTATGTGCAGGAAACCGTGGAAGAGCAcg > 2:1433608/1‑72 (MQ=255) ggTGGNAAAACTGCACGCGCGGGAAAGGGCCATTCAGGTGGATTATGTGCAGGAAACCGTGGAAGAGCAcgc < 2:337681/72‑1 (MQ=255) ggTGGCAAAACTGCACGCGCTGGAAAGCGGCATTCAGGTGGATTATGTGCAGGAAACCGTGGAAGAGCAcgc > 1:1637052/1‑72 (MQ=255) | TCTGGCCGAGAGTATGGCGCGCGAAGGC‑GCGACGGTGACCGGTCTGGATATGGGCTTTGAGCCATTGCAGGTGGCAAAACTGCACGCGCTGGAAAGCGGCATTCAGGTGGATTATGTGCAGGAAACCGTGGAAGAGCACGC > NC_012967/2286473‑2286613 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |