| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_012967 | 160632 = | 359 (1.430) | 4 (0.020) | 4/128 | 18.1 | 1.4% | coding (1346/1398 nt) | pcnB | polynucleotide adenylyltransferase PcnB |
| ? | NC_012967 | = 326571 | 234 (1.040) | coding (1216/1887 nt) | prpE | propionate‑‑CoA ligase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GGGTGAGTTCCAGGTTTCCGCGCCACCAGACCAAAAAGGGATGCTCAACGAGCTGGATGAAGAACCGTCACCGCGTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_012967/160709‑160632‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgtcgGCCTGTCGTCCAGACCGCGAGCAATCGCCATAATCGGCCAGCCGGATTCGGTCTGCCAGTAGTTGTCGATG < NC_012967/326571‑326501 GGGTGAGTTCCAGGTTTCCGCGCCACCAGACCAAAAATGGATGCTCAACGAGCTGGATGAAGAACCGTCACC > 1:2434695/1‑72GGGTGAGTTCCAGGTTTCCGCGCCACCAGACCAAAAAGGGATGCTCAACGAGCTGGATGAAGAACCGTCACC < 2:6464726/72‑1GGGTGAGTTCCAGGTTTCCGCGCCACCAGACCAAAAAGGGATGCTCAACGAGCTGGATGAAGAACCGTCACC < 1:536874/72‑1 GGTGAGTTCCAGGTTTCCGCGCCACCAGACCAAAAAGGGATGCTCAACGAGCTGGATGAAGAACCGTCACCG < 2:8510666/72‑1 GGTGAGTTCCAGGTTTCCGCGCCACCAGACCAAAAAGGGATGCTCAACGAGCTGGATGAAGAACCGTCACCG < 1:176934/72‑1 GGTGAGTTCCAGGTTTCCGCGCCACCAGACCAAAAAGGGATGCTCAACGAGCTGGATGAAGAACCGTCACCG > 2:563968/1‑72 GGTGAGTTCCAGGTTTCCGCGCCACCAGACCAAAAAGGGATGCTCAACGAGCTGGATGAAGAACCGTCACCG < 1:4099240/72‑1 GTGAGTTCCAGGTTTCCGCGCCACCAGACCAAAAAGGGATGCTCAACGAGCTGGATGAAGAACCGTCACCGC < 2:3865084/72‑1 GTGAGTTCCAGGTTTCCGCGCCACCAGACCAAAAAGGGATGCTCAACGAGCTGGATGAAGAACCGTCACCGC > 1:8705048/1‑72 GTGAGTTCCAGGTTTCCGCGCCACCAGACCAAAAAGGGATGCTCAACGAGCTGGATGAAGAACCGTCACCGC > 1:7639291/1‑72 TGAGTTCCAGGTTTCCGCGCCACCAGACCAAAAAGGGATGCTCAACGAGCTGGATGAAGAACCGTCACCGCG < 1:8597713/72‑1 GAGTTCCAGGTTTCCGCGCCACCAGACCAAAAAGGGATGCTCAACGAGCTGGATGAAGAACCGTCACCGCGT < 1:7459663/72‑1 GAGTTCCAGGTTTCCGCGCCACCAGACCAAAAAGGGATGCTCAACGAGCTGGATGAAGAACCGTCACCGCGT > 2:5301322/1‑72 GAGTTCCAGGTTTCCGCGCCACCAGACCAAAAAGGGATGCTCAACGAGCTGGATGAAGAACCGTCACCGCGT < 1:7764073/72‑1 GAGTTCCAGGTTTCCGCGCCACCAGACCAAAAAGGGATGCTCAACGAGCTGGATGAAGAACCGTCACCGCGT < 1:7680947/72‑1 GAGTTCCAGGTTTCCGCGCCACCAGACCAAAAAGGGATGCTCAACGAGCTGGATGAAGAACCGTCACCGCGT < 1:5140233/72‑1 GAGTTCCAGGTTTCCGCGCCACCAGACCAAAAAGGGATGCTCAACGAGCTGGATGAAGAACCGTCACCGCGT > 1:2868584/1‑72 AGTTCCAGGTTTCCGCGCCACCAGACCAAAAAGGGATGCTCAACGAGCTGGATGAAGAGCCGTCACCGCGTC < 1:5585839/72‑1 AGTTCCAGGTTTCCGCGCCACCAGACCAAAAAGGGATGCTCAACGAGCTGGATGAAGAACCGTCACCGCGTC < 1:4152272/72‑1 AGTTCCAGGTTTCCGCGCCACCAGACCAAAAAGGGATGCTCAACGAGCTGGATGAAGAACCGTCACCGCGTC > 1:2696625/1‑72 AGTTCCAGGTTTCCGCGCCACCAGACCAAAAAGGGATGCTCAACGAGCTGGATGAAGAACCGTCACCGCGTC < 1:6507127/72‑1 AGTTCCAGGTTTCCGCGCCACCAGACCAAAAAGGGATGCTCAACGAGCTGGATGAAGAACCGTCACCGCGTC < 2:5058284/72‑1 AGTTCCAGGTTTCCGCGCCACCAGACCAAAAAGGGATGCTCAACGAGCTGGATGAAGAACCGTCACCGCGTC < 2:4111979/72‑1 AGTTCCAGGTTTCCGCGCCACCAGACCAAAAAGGGATGCTCAACGAGCTGGATGAAGAACCGTCACCGCGTC < 1:1083406/72‑1 GTTCCAGGTTTCCGCGCCACCAGACCAAAACGGGATGCTCAACGAGCTGGATGAAGAACCGTCACCGCGTCG < 1:6002188/72‑1 GTTCCAGGTTTCCGCGCCACCAGACCAAAAAGGGATGCTCAACGAGCTGGATGAAGAACCGTCACCGCGTCG > 1:64810/1‑72 GTTCCAGGTTTCCGCGCCACCAGACCAAAAAGGGATGCTCAACGAGCTGGATGAAGAACCGTCACCGCGTCG < 1:8083367/72‑1 GTTCAAGGTTTCCGCGCCACCAGACCAAAAAGGGATGCTCAACGAGCTGGATGAAGAACCGTCACCGCGTCG > 2:1335892/1‑72 TCCAGGTTTCCGCGCCACCAGACCAAAAAGGGATGCTCAACGAGCTGGATGAAGAACCGTCACCGCGTCGcg > 1:2978456/1‑70 ACCAGACCAAAAAGGGATGCTCAACGAGCTGGATCAAGAACCGTCACCGCGTCGGCCTGTCGTCCAGACCGC > 2:6571705/1‑72 AGCTGGATCAAGAACCGTCACCGCGTCGGCCTGTCGTCCAGACCGCGAGCAATCGCCATAATCGGCCAGCCG < 1:6571705/72‑1 gACCGCGCCGGCCTGTCTTCCGGACCCCGAGAAATCGCCATAGTCGGCCAGCCGGATTCGGTCTGCCAGTAG < 1:334552/71‑1 gCCGCGTCGGCCTGTCGTCCAGACCGCGAGCAATCGCCATAATCGGCCAGCCGGATTCGGTCTGCCAGTAGT < 1:660438/71‑1 caCGTCGGACTGTCGTCCAGACCGCGAGCAATCGCGATGATCGGCCAGCCGGATTCGGTCTGCCAGTAGTTG < 1:4951637/70‑1 CGCGTCGGCCGGCGCTCCAGACCGGGAGCAATCGCCATAATCGGCCAGCCGGATTCGGTCTGCCAGTAGTTG < 1:109031/72‑1 GCGTCGGCCTGTCGTCCAGACCGCGAGCAATCGCCATAATCGGCCAGCCGGATTCGGTCTGCCAGTAGTTGT < 2:5802475/72‑1 CGTCGGCCTGTCGTCCAGACCGCGAGCAATCGCCATAATCGGCCACCCGGATTCGGTCTGCCAGTAGTCGTC > 2:4020937/1‑72 CGTCGCCCTCTCGTCCAGACCGCGAGCAATCGCCATAATCGGCCAGCCGGATTCGGTCTTCCAGTAGTTGTC < 1:3028602/72‑1 GTCGGCCTGTCGTCCAGACCGCGAGCAATCGCCATAATCGGCCAGCCGGATTCGGTCTGCCCGTAGTTGTCG > 2:639766/1‑72 GTCGGCCTGTCGTCCAGACCGCGAGCAATCGCCATAATCGGCCAGCCGGATTCGGTCTGCCAGTAGTTGTCG > 2:5162729/1‑72 GTCGGCCTGTCGTCCAGACCGCGAGCAATCGCCATAATCGGCCAGCCGGATTCGGTCTGCCAGTAGTTGTCG < 1:755541/72‑1 GTCGGCCTGTCGTCCAGACCGCGAGCAATCGCCATAATCGGCCAGCCGGAATCCGGCTGGCAGTAGTGGTCG > 2:2386982/1‑72 TCGGCCTGTCGTCCAGACCGCGAGCAATCGCCATAATCGGCCAGCCGGATTCGGTCTGCCAGTAGTTGTCGA < 1:2842316/72‑1 TCGGCCTGTCGTCCAGACCGCGAGCAATCGCCATAATCGGCCAGCCGGATTCGGTCTGCCAGTAGTTGTCGA < 2:5453568/72‑1 CGGCCTGTCGTCCAGACCGCGAGCACTCGCCATAATCGGCCAGCCGGATTCGGACTGCCAGTAGTTGTCGAT > 1:3420928/1‑72 CGGCCTGTCGTCCAGACCGCGAGCAATCGCCATAATCGGCCAGCCGGATTCGGTCTGCCAGTAGTTGTCGAT > 2:5213922/1‑72 CGGCCTGTCGTCCAGACCGCGAGCAATCGCCATAATCGGCCAGCCGGATTCGGTCTGCCAGTAGTTGTCGAT < 2:6111169/72‑1 GGCCTGTCGTCCAGACCGCGAGCAATCGCCATAATCGGCCAGCCGGGTTCGGTCTGCCAGTAGTTGTCGATG > 1:2210815/1‑72 GGCCTGTCGTCCAGACCGCGAGCAATCGCCATAATCGGCCAGCCGGATTCGGTCTGCCAGTAGTTGTCGATG < 1:7380192/72‑1 GGCCTGTCGTCCAGACCGCGAGCAATCGCCATAATCGGCCAGCCGGATTCGGTCTGCCAGTAGTTGTCGATG > 1:2012563/1‑72 GGCCTGTCGTCCAGACCGCGAGCAATCGCCATAATCGGCCAGCCGGATTCGGTCTGCCAGTAGTTGTCGATG < 2:8126350/72‑1 GGCCTGTCGTCCAGACCGCGAGCAATCGCCATAATCGGCCAGCCGGATTCGGTCTGCCAGTAGTTGTCGATG > 1:3145149/1‑72 GGGTGAGTTCCAGGTTTCCGCGCCACCAGACCAAAAAGGGATGCTCAACGAGCTGGATGAAGAACCGTCACCGCGTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_012967/160709‑160632‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgtcgGCCTGTCGTCCAGACCGCGAGCAATCGCCATAATCGGCCAGCCGGATTCGGTCTGCCAGTAGTTGTCGATG < NC_012967/326571‑326501 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |