| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_012967 | 2,237,486 | 0 | G | A | 27.9% | 129.2 / 23.7 | 69 | intergenic (+11/+92) | ECB_RS11165/yejO | tRNA‑Pro/autotransporter YejO |
| Reads supporting (aligned to +/- strand): ref base G (24/25); new base A (0/19); total (24/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.76e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
CTGGTAGCGCACCGTCATGGGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCC‑AAG‑AAAAA‑A‑C‑CAA‑CCC‑TTA‑C‑GGTT‑GG‑TTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACA > NC_012967/2237415‑2237553 | cgggTAGCGCGCCGTCATGGGGTGTCGGGGGTCGGAGGTTCAAATCCGCTCGTGCCGACCAAAAATCCC‑AAg < 1:2859208/70‑1 (MQ=255)cTGGTAGCGCACCGTCATGGGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCC‑AAg < 1:6381002/72‑1 (MQ=255)cTGGTAGCGCACCGTCATGGGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCC‑AAg < 1:4642609/72‑1 (MQ=255)cTGGTAGCGCACCGTCATGGGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCAGACCAAAAATCCC‑AAg < 1:7959598/72‑1 (MQ=255) tGGTAGCGCACCGTCATGGGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCC‑AAG‑a > 1:1860008/1‑72 (MQ=255) tGGTAGCGCACCGTCATGGGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCC‑AAG‑a > 2:3650514/1‑72 (MQ=255) tGGTAGCGCACCGTCATGGGGTGTCGGGGGTCGCAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCC‑AAG‑a > 2:6112514/1‑72 (MQ=255) ggTAGCGCACCGTCATGGGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCC‑AAG‑aa < 1:5371785/72‑1 (MQ=255) gTAGCGCACCGTCATGGGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCC‑AAG‑aaa < 2:7020826/72‑1 (MQ=255) gTAGCGCACCGTCATGGGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCC‑AAG‑aaa > 1:7507466/1‑72 (MQ=255) taccgcACCGTCATGGGGTGTCTGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCC‑AAG‑aaaa < 2:4417386/69‑1 (MQ=255) tAGCGCACCGTCATGGGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCC‑AAG‑aaaa < 2:7934257/72‑1 (MQ=255) aGCGCACCGTCATGGGGTGTCGGGGGTCGGAGGGTCAAATCCTCTCGTGCCGACCAAAAATCCC‑AAG‑aaaaa > 1:2190691/1‑72 (MQ=255) gcgcACCGTCATGGGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCC‑AAG‑aaaaa‑a > 1:6904826/1‑72 (MQ=255) gcgcACCGTCATGGGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCC‑AAG‑aaaaa‑a > 1:6605154/1‑72 (MQ=255) gcgcACCGTCATGGGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCC‑AAG‑aaaaa‑a < 2:4897507/72‑1 (MQ=255) cACCGTCATGGGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCC‑AAG‑AAAAa‑a‑c‑ca > 2:4495027/1‑72 (MQ=255) cACCGTCATGGGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCC‑AAG‑AAAAa‑a‑c‑ca < 2:6044442/72‑1 (MQ=255) cACCGTCATGGGGTGTCGGGGGTCGGAGGGTCAAATCCTCTCGTGCCGACCAAAAATCCA‑AAG‑AAAAa‑a‑a‑ca > 2:4919956/1‑72 (MQ=255) aCCGTCATGGGGTGTCGGGGGTCGGAGGGTCAAATCCTCTCGTGCCGACCAAAAATCCC‑AAG‑AAAAa‑a‑a‑cac > 2:2760629/1‑71 (MQ=255) cGTCATGGGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCC‑AAG‑AAAAa‑a‑c‑caa‑cc < 2:7330413/72‑1 (MQ=255) cGTCATGGGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCC‑AAG‑AAAAa‑a‑c‑caa‑cc < 2:6166384/72‑1 (MQ=255) cGTCATGGGGTGTCGGGGGTCGGAGGTTCAAAACCCCTTTGGCCCACCCAAAATCCCAAAG‑AAAAa‑a‑a‑caca > 2:1274003/1‑70 (MQ=255) gTCATGGGGTGTCGGGGGTCGGGGGGTCAAAACCTCTCGTGCCGACCAAAAAACCC‑AAA‑AAAAa‑a‑a‑naaaac > 2:774260/1‑69 (MQ=255) gTCATGGGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACAAAAAATCCC‑AAG‑AAAAA‑A‑C‑CAA‑ccc < 1:5994270/72‑1 (MQ=255) gTCATGGGGTGTCGGGGGTCGGAGGGTCAAATCCTCTCGTGCCGACCAAAAATCCC‑AAG‑AAAAa‑a‑a‑caaaac > 1:3679584/1‑69 (MQ=255) tCATGGGGTGTCGGGGGTCGGAGGGTCAAATCCTTCCGTGGCGACCCAAAAACCC‑AAG‑GAAAA‑A‑CACAA‑ccc > 2:5651020/1‑72 (MQ=255) gcATGGGGTGGGGGGGGTGGGAGTTAAAACCCCCCCCGTGCCAACAAAAAACCCA‑AAA‑AAAAA‑A‑C‑CAA‑CCC‑t < 1:3961372/71‑1 (MQ=255) cATGGGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCC‑AAGAAAAAA‑A‑C‑CAA‑CCC‑t > 1:6592417/1‑72 (MQ=255) cATGGGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCC‑AAG‑AAAaa‑a‑c‑caa‑accct > 2:5911025/1‑70 (MQ=255) gggggcTGGCGGGGCTCGGAAGTCAAACCCCTCTCGTGCCCCCAAAAAACCCA‑AAA‑AAAAA‑A‑C‑CAA‑CCC‑TTa < 1:5691692/70‑1 (MQ=255) ggggTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCC‑AAG‑AAAAA‑A‑C‑CAA‑CCC‑TTA‑C‑g < 1:8314494/72‑1 (MQ=255) ggggTGCCGGGGGTGGGAGTTTCAAACCCTCTCGTGCCGACCAAAAACCCC‑AAA‑AAAAA‑A‑C‑CAA‑CCC‑TTA‑C‑g < 1:4216383/72‑1 (MQ=255) cgcgtgtCGGGGGTCGGAGTTTAAATCCCTCTCGTGCCGACAAAAAACCCC‑AAG‑AAAAA‑A‑C‑CAA‑CCC‑TTA‑C‑g < 1:2252580/69‑1 (MQ=255) gggTGTGCGGGGGCGGGGGTTCAAATCCTCCCGGGCCCAACAAAAAACCC‑AAA‑AAAAA‑ACC‑CAA‑CCC‑TTA‑C‑g < 2:1126948/72‑1 (MQ=255) gggTGTCGGGGGTCGGATGTTCAAATCCTCTCGTGCCGACCAAAAATCCC‑AAGAAAAAA‑A‑C‑AAA‑CCC‑TTagg > 1:5935934/1‑70 (MQ=255) ggTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCC‑AAG‑AAAAA‑A‑C‑CAA‑CCC‑TTA‑C‑ggt < 1:3473793/72‑1 (MQ=255) ggTGTCGGGGGTCGGAGGTTAAAATCCTCCCGGGCCGACCAAAAATCCC‑AAG‑AAAAA‑A‑C‑CAA‑CCC‑TTA‑C‑ggt < 1:4492067/72‑1 (MQ=255) ggTGTCGGGGGTCGGAGGGTCAAATCCTCTCGTGCCGACCCAAAATCCC‑AAG‑AAAAA‑A‑C‑CAA‑ACC‑CTA‑ccgg > 2:4349854/1‑69 (MQ=255) tgtCGGGGGTCGGAGTTTCAAATCCTCGCGTGCCGACCAAAAATCCC‑AAG‑AAAAA‑A‑C‑CAA‑CCC‑TTA‑C‑ggtt‑g < 2:7986366/72‑1 (MQ=255) gtCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCC‑AAG‑AAAAA‑A‑C‑CAA‑CCC‑TTA‑C‑ggtt‑gg < 2:3573586/72‑1 (MQ=255) ggcGGGGGTCGGAGGTACAAACCCTCTCGGCTCGACAAAAAACCCA‑AAG‑AAAAA‑A‑C‑CAA‑CCC‑TTA‑C‑ggtt‑gg < 1:268305/70‑1 (MQ=255) gcGGGGGTCGAAGTTAAAAACCCTCTCGTCCCGACAAAAAATCCC‑AAA‑AAAAA‑A‑C‑CAA‑CCC‑TTA‑C‑ggtt‑gg‑t < 1:3673337/71‑1 (MQ=255) cGGGGGTCGGAGTTTCAAACCCTCTCGTGCCGACAAAAAACCCC‑AAA‑AAAAA‑A‑C‑CAA‑CCC‑TTA‑C‑ggtt‑gg‑tt < 2:4757189/72‑1 (MQ=255) cGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCC‑AAGAAAAAA‑A‑A‑CAA‑CCC‑CTA‑C‑tgtt‑ggg > 2:5781536/1‑71 (MQ=37) gggggTCGGAGGTTAAAATCCTCTCGTGCCGACAAAAAATCCC‑AAG‑AAAAA‑A‑C‑CAA‑CCC‑TTA‑C‑GGTT‑GG‑ttt < 1:8312640/72‑1 (MQ=255) gggggTCGGAGGTAAAAACCCTCCCGTGCCGACAAAAAATCCC‑AAG‑AAAAA‑A‑C‑CAA‑CCC‑TTA‑C‑GGTT‑GG‑ttt < 1:4659751/72‑1 (MQ=255) gggTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAACCCC‑AAG‑AAAAA‑A‑C‑CAA‑CCC‑TTA‑C‑GGTT‑GG‑ttttt < 2:7195224/72‑1 (MQ=255) gggTCGGAGGTTCAAATCCTCTCGTGCCGACAAAAAATCCC‑AAA‑AAAAA‑A‑C‑CAA‑CCC‑TTA‑C‑GGTT‑GG‑ttttt < 2:7281302/72‑1 (MQ=39) gggTCGGAAGTTCAAACCCCCCCGGGGCCAACAAAAAACCC‑AAA‑AAAAA‑ACC‑CAA‑CCC‑TTA‑C‑GGTT‑GG‑tttt < 2:7571698/72‑1 (MQ=255) ggTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCC‑AAG‑AAAAA‑A‑C‑CAA‑CCC‑TTA‑C‑TGTT‑GG‑tttttt > 1:8482588/1‑72 (MQ=255) ggTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCC‑AAG‑AAAAA‑A‑C‑CAA‑CCC‑TTA‑C‑CGTT‑TG‑tttttt > 2:8610120/1‑72 (MQ=255) gctCGGAGGTTCAAATCCTCTCGTGCCGACAAAAAATCCA‑AAA‑AAAAA‑A‑C‑CAA‑CCC‑TTA‑C‑GGTT‑GG‑tttttt < 2:7178785/70‑1 (MQ=38) ttCGGAGGTTCAAATCCTCTCGTGCCGACAAAAAACCCA‑AAA‑AAAAA‑A‑C‑CAA‑CCC‑TTA‑C‑GGTT‑GG‑ttttttt < 2:7794096/71‑1 (MQ=38) tCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCC‑AAG‑AAAAA‑A‑C‑CAA‑CCC‑TTA‑C‑GGTT‑GG‑TTTTTTta > 1:6637343/1‑72 (MQ=255) cGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCC‑AAGAAAAAA‑A‑C‑CAA‑ACC‑TTA‑C‑CGTG‑GG‑tttttttt > 2:4161816/1‑71 (MQ=255) cGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCC‑AAG‑ACAAA‑A‑C‑CGA‑CCC‑TTA‑C‑GGTT‑GG‑ttttttttt > 2:6721103/1‑70 (MQ=255) ggAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCC‑AAGAAAAAA‑A‑C‑AAA‑CCC‑TTT‑C‑GGCT‑GG‑gtttttttt > 2:5139167/1‑70 (MQ=255) ggAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCC‑AAG‑AAAAA‑A‑C‑CAA‑CCC‑TTA‑C‑GGTT‑GG‑TTTTTTtata < 1:8117029/72‑1 (MQ=255) gAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCC‑AAGAAAAAA‑A‑C‑CAA‑CCC‑TTC‑C‑GGTG‑GG‑gttttttttt > 2:7385163/1‑69 (MQ=255) gAGGTTCAAATCCCCCCGGCCCCAAAAAAAACCCC‑AAA‑AAAAA‑ACC‑CAC‑CCC‑TTA‑C‑GGTT‑GG‑TTTTTTtata < 2:7301795/72‑1 (MQ=255) aGGTTCAAATCCTCTCGTGCCGACCAAAAATCCC‑AAG‑AAAAA‑A‑C‑CAA‑CCC‑TTA‑C‑GGTT‑GG‑TTTTTTCATATc > 2:8446710/1‑72 (MQ=255) tttCAATCCCTCTCNNNCCGCCAAAAAACCCA‑AAN‑ACAAA‑C‑C‑CAC‑CCC‑TTA‑C‑GGTT‑GG‑TTTTTTTATATCTg < 1:6230753/71‑1 (MQ=255) ttCAATCCCTCTCGTCCCAACAAAAAACCCA‑AAA‑AAAAA‑C‑C‑CAA‑CCC‑TTA‑C‑GGTT‑GG‑TTTTTTTATATCTGc < 1:8533241/72‑1 (MQ=255) ttCAAACCCTCCCGTGCCGACAAAAAACCCC‑AAA‑AAAAA‑A‑C‑CAA‑CCC‑TTA‑C‑GGTT‑GG‑TTTTTTTATATCTGc < 1:8743063/72‑1 (MQ=37) taaaaCCCTCTCGTGCCGACAAAAAACCCA‑AAA‑AAAAA‑C‑C‑CAA‑CCC‑TTA‑C‑GGTT‑GG‑TTTTTTTATATCTGCa < 2:4298230/70‑1 (MQ=255) cAAATCCCCCCTCGCCAACAAAAAATCCC‑AAA‑AAAAA‑ACC‑CAA‑CCC‑TTA‑C‑GGTT‑GG‑TTTTTTTATATCTGCa < 1:6340179/72‑1 (MQ=255) aaaTCCTCTCGTGCCGACCAAAAATCCC‑AAG‑AAAAA‑A‑C‑CAA‑CCC‑TTA‑C‑GGTT‑GG‑TTTTTTTATATCTGCaat < 2:8740176/72‑1 (MQ=255) aaaTCCTCTCGTGCCGACCAAAAATCCC‑AAG‑AAAAA‑A‑C‑CAA‑CCC‑CTA‑C‑GGTT‑GG‑GTTTTTTTTATTTTCaat > 2:6896916/1‑72 (MQ=255) aaTCCTCTCGTGCCGACCAAAAATCCC‑AAG‑AAAAA‑A‑C‑CAA‑CCC‑TTA‑C‑GGTT‑GG‑TTTTTTTATATCTGCaatt < 2:7243373/72‑1 (MQ=255) ccccTCCCGTGCCAACAAAAAACCCA‑AAA‑AAAAA‑C‑C‑CAC‑CCC‑TTA‑C‑GGTT‑GG‑TTTTTTTATATCTGCaatta < 2:7446982/70‑1 (MQ=255) aTCCTCTCGTGCCGACCAAAAATCCC‑AAG‑AAAAA‑ACC‑CAA‑CCC‑TTC‑C‑GGTT‑GG‑TTTTTTTTTTTTTGCaatt > 1:5996262/1‑72 (MQ=255) aTCCTCTCGTGCCGACCAAAAATCCC‑AAG‑AAAAA‑A‑C‑CAA‑CCC‑TTA‑C‑TGTT‑GG‑TTTTTTTATATCTGCaatta < 2:4508882/72‑1 (MQ=255) tCCTCTCGTGCCGACCAAAAATCCC‑AAG‑AAAAA‑A‑C‑CAA‑CCC‑CTA‑C‑GGTT‑GG‑GTTTTTTATTTTTTCaattta > 2:8237781/1‑70 (MQ=255) ccTCTCGTGCCGACCAAAAATCCC‑AAGAAAAAA‑A‑C‑CAA‑CCC‑TAC‑C‑GGTG‑GG‑GTTTTTTTTTTTTTCaattat > 2:7549021/1‑71 (MQ=255) ctcgCGGGCCAACAAAAAACCCA‑AAA‑AAAAA‑C‑C‑CAC‑CCC‑TTA‑C‑GGTT‑GG‑TTTTTTTATATCTGCaattaatt < 2:2475702/72‑1 (MQ=255) cGTCCCGACAAAAAACCCA‑AAA‑AAAAA‑C‑C‑CAA‑CCC‑TTA‑C‑GGTT‑GG‑TTTTTTTATATCTGCAATGAATTCGAt < 2:2353639/72‑1 (MQ=255) gTGCCGACCAAAAATCCC‑AAG‑AAAAA‑A‑C‑CAA‑CCC‑TTA‑CGGGTT‑GG‑TTTTTTT‑TATCTTCAAATAATTTGaca > 2:2011388/1‑70 (MQ=255) gTGCCGACCAAAAATCCC‑AAG‑AAAAA‑A‑C‑CAA‑CCC‑TTA‑C‑GGTT‑GG‑GTTTTTTATATCTGCAATTAATTTGATa > 1:8544814/1‑72 (MQ=255) tGCCGACAAAAAACCCA‑AAA‑AAAAA‑A‑C‑CAA‑CCC‑TTA‑C‑GGTT‑GG‑TTTTTTTATATATGCAATTAATTCGATaa < 1:6558248/72‑1 (MQ=255) gACCAAAAATCCC‑AAG‑AAAAA‑A‑C‑CAA‑CCC‑CTA‑C‑GGGT‑GG‑TGTTTTTTTTTTTTCAAATAATTTGCTAAACaa > 1:6963374/1‑71 (MQ=255) caacAAAAAACCA‑AAA‑AAAAA‑ACC‑CAC‑CCC‑TTA‑C‑GGTT‑GT‑TTTTTTTATATCTGCAATTAATTCGATAAACa < 2:697956/69‑1 (MQ=255) aaaaaaaaaCCA‑AAA‑AAAAA‑ACC‑CCA‑CCC‑TTT‑G‑CGTT‑GGTTTTTTTTATATCTGCAATTAATTCGATAAACa < 2:7547503/69‑1 (MQ=255) aCCAAAAAACCC‑AAA‑AAAAA‑ACC‑CAC‑CCC‑TTA‑C‑GGTT‑GG‑TTTTTTTATATCTGCAATTAATTCGATAAACAg < 2:4973531/72‑1 (MQ=255) ccAAAAATCCC‑AAG‑AAAAA‑A‑C‑CAA‑CCC‑TTA‑C‑GGTT‑GG‑TTTTTTTATATCTGCAATTAATTCGATAAACAGAc < 2:6943658/72‑1 (MQ=255) caaaaaaaCCA‑AAA‑AAAAA‑C‑C‑CAACCCC‑TTA‑G‑GGTG‑GG‑TTTTTTTATATCTGCAATTAATTCGATAAACAGa < 1:1581738/70‑1 (MQ=255) acAAAAAACAC‑AAA‑AAAAA‑ACC‑CCC‑CCC‑TTG‑C‑GGTT‑GGTTTTTTTTATATCTGCAATTAATTCGATAAACAg < 1:5709824/71‑1 (MQ=255) cAAAACCCCC‑AAG‑AAAAA‑C‑C‑CAA‑CCC‑TTA‑C‑GGTT‑GG‑TTTTTTTATATCTGCAATTAATTCGATAAACAGAcc < 2:7035799/72‑1 (MQ=255) cAAAAAACCC‑AAA‑AAAAACC‑C‑CAC‑CCC‑TTA‑C‑GGTT‑GG‑TTTTTTTATATCTGCAATTAATTCGATAAACAGAc < 2:5283649/72‑1 (MQ=255) aaaaaaCCC‑AAA‑AAAAA‑C‑C‑CCA‑CCCTTTA‑C‑GGTT‑GG‑TTTTTTTATATCTGCAATTAATTCGATAAACAGAcc < 1:2139091/72‑1 (MQ=255) aaaCCCC‑AAA‑GAAAA‑A‑C‑CAA‑CCCTTTA‑C‑GGTG‑GG‑TTTTTTTATATCTGCGATTAATTCGATAAACAGACCGt < 1:4327734/72‑1 (MQ=255) aaaCCCA‑AAA‑AAAAA‑C‑C‑CCA‑CCC‑TTT‑G‑GGTTGGG‑TTTTTTTATATCTGCAATTAATTCGATAAACAGACCGt < 1:5009526/72‑1 (MQ=255) aaTCCC‑AAG‑AAAAA‑A‑C‑CAA‑CCC‑TTA‑C‑GGTT‑GG‑TTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGa > 1:8662766/1‑72 (MQ=255) ccc‑AAG‑AAAAA‑A‑C‑CAA‑CCC‑TTA‑C‑GGTT‑GG‑TTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGacac < 1:8727227/72‑1 (MQ=255) ccc‑AAA‑AAAAA‑C‑C‑CCA‑CCC‑TTAGC‑GTTT‑GT‑TTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGaca < 2:1865213/72‑1 (MQ=255) cc‑AAT‑AAAAA‑A‑C‑CAA‑CCC‑TTA‑C‑GGTT‑GG‑TTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGAcaca < 2:8637934/72‑1 (MQ=255) | CTGGTAGCGCACCGTCATGGGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCC‑AAG‑AAAAA‑A‑C‑CAA‑CCC‑TTA‑C‑GGTT‑GG‑TTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACA > NC_012967/2237415‑2237553 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |