| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_012967 | 3,823,117 | 0 | A | C | 26.2% | 150.0 / 17.6 | 85 | G309G (GGT→GGG) | ECB_RS18855 | PTS sugar transporter subunit IIB |
| Reads supporting (aligned to +/- strand): ref base A (37/25); new base C (0/22); total (37/48) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.65e-07 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 160 total aligned reads displayed.
AACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACC‑GGCATGGC‑GG‑TTAA‑GGTT‑GCGGG‑AATCA‑GC‑AAAC‑CCGCCACTTTT‑ACCCGA‑TTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCACGGCACCAA > NC_012967/3823046‑3823187 | aaCAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACC‑GGCATGGC‑GG‑TTAA‑GGTT‑GCGGG‑AATCA‑GC‑aaa < 2:7181055/72‑1 (MQ=255) aCAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACC‑GGCATGGCGGG‑TTAA‑GGTG‑GCGGG‑AGGAA‑GC‑aaa > 1:5073514/1‑72 (MQ=255) cAGGAGGGTAAATTCCAGCGGTTCGGTAATTCCCACC‑GGCATGGC‑GG‑TTAA‑GGTT‑GCGGG‑AATCA‑GC‑AAAc‑c < 2:1456796/72‑1 (MQ=255) cAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACC‑GGCATGGC‑GG‑TTAA‑AGGT‑GCGGG‑GATCA‑GC‑aaaac > 2:6980739/1‑70 (MQ=255) cAGAAAGGTAAATTCCAGCGGTGCAGTAATTCCCACC‑GGCATGGC‑GG‑TTAA‑GGTT‑GCGGG‑AATCA‑GC‑AAAc‑c < 2:2691936/72‑1 (MQ=255) aGGAAGGTTAATTCCAGCGGTTCGGTAATTCCCACC‑GGCATGGCGGG‑TTAA‑GGTG‑CGGGG‑AAGCA‑GA‑AAAc‑c > 2:2421432/1‑72 (MQ=255) aGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACC‑GGCATGGCGGG‑TTAA‑GGTG‑GGGGG‑AAGCA‑Ga‑aaaac > 1:690760/1‑70 (MQ=255) aGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACC‑GGCATGGC‑GG‑TTAA‑GGTT‑GCGGG‑AATCA‑GC‑AAAc‑cc < 1:7567811/72‑1 (MQ=255) ggAAGGTAAATTCCAGCGGTTCGGTAATTCCCACC‑GGCATGGC‑GG‑TTAA‑GGTT‑GCGGG‑AATCA‑GC‑AAAC‑CCg < 2:7801509/72‑1 (MQ=255) ggaGGTAAATTCCAGCGGTTCGGTAATTACCACC‑GGCATGGC‑GG‑TTAA‑GGTT‑GCGGG‑AATCA‑GC‑AAAC‑CCGc < 1:295222/70‑1 (MQ=255) gAAGGTAAATTCCAGCGGTTCGGTAATTCCCACC‑GGCATGGC‑GG‑TTTA‑AGTT‑GCGGG‑GGTGA‑GC‑AAAC‑CCGc > 2:6169618/1‑72 (MQ=255) aaGGTAAATTCCGGCGTTTCGGTAATTCCCACC‑GGCATGGC‑GG‑TTAA‑GGTT‑GCGGG‑AATCA‑GC‑AAGC‑CCGcc < 1:1773603/72‑1 (MQ=255) aGGTAAATTCCAGCGGTTCGGTAATTCCCACC‑GGCATGGC‑GG‑TTAA‑GGAT‑GCGGG‑AATCA‑GC‑AAAC‑CCGCCa < 1:5147917/72‑1 (MQ=255) aGGTAAATTCCAGCGGTTCGGTAATTCCCACC‑GGCATGGC‑GG‑TTAA‑GATT‑GCGGG‑AATCA‑GC‑AAAC‑CCGCCa < 2:5420395/72‑1 (MQ=255) aaaTTCCAGCGGTTCGGTAATTCCCCCC‑GGCATGGC‑GG‑TTAA‑AGAT‑GCGGG‑GATCA‑GC‑AAAA‑CCGCCAcgtc > 2:329800/1‑69 (MQ=255) ttCCAGCGGTTCGGTAATTCCCACC‑GGCATGGCGGG‑TTAA‑GGTT‑GGGGG‑AAT‑A‑GCAAAAC‑CCCCCCCttttt > 1:1369937/1‑71 (MQ=255) tCCAGCGGTTCGGTAATTCCCACC‑GGCATGGC‑GG‑TTAA‑AGGT‑TCGGG‑GATCA‑GC‑AAAC‑CCCCCACCTTT‑Acc > 1:6269036/1‑72 (MQ=255) cccgCGGTTCGGGTATTCCCCCCGGGCGGGGG‑GG‑TTAA‑GGTG‑GGGGA‑AACCA‑GA‑AACC‑CCGCCACTTTT‑Acc < 2:4371124/69‑1 (MQ=255) cAGCGGTTCGGTAATCCCCACC‑GGCATGGC‑GG‑TTAA‑GGTT‑GCGGG‑AATCA‑GC‑AAAC‑CCGCCACTTTT‑ACCCg < 1:8668592/72‑1 (MQ=255) ggcggtgcggtAATCCCCCCC‑GGCAGGGG‑GG‑TTAA‑GGTG‑GCGGG‑AATCA‑GC‑AACC‑CCGCCACTTTT‑ACCCGa < 1:6794746/71‑1 (MQ=255) aGCGGTTCGGTAATTCCCACC‑GGCATGGCGGG‑TTAA‑GGTT‑GTGGG‑AATAG‑GA‑AAAC‑CCCCCCCTTTT‑TCCCg > 1:7325217/1‑72 (MQ=255) aGCGGTTCGGTAATTCCCACC‑GGCATGGCGGG‑TTAA‑GGGT‑CCGGG‑GACAG‑GCAAAAC‑CCCCCCCTTTT‑cccc > 1:4224274/1‑72 (MQ=255) aGCGGTTCGGTAATTCCCACC‑GGCATGGC‑GG‑GTAA‑GGGT‑GCGGG‑GATCA‑GC‑AAAC‑CCGCCCCTTTT‑Atccca > 1:6172377/1‑70 (MQ=255) gCGGTTCGGTAATTCCCACC‑GGCATGGC‑GG‑TTAA‑GGTT‑GCGGG‑GATCA‑GC‑AAAA‑CCCCCACTTTT‑ACCCgca > 2:8100645/1‑70 (MQ=255) gCGGTTCGGTAATTCCCACC‑GGCATGGC‑GG‑CTAA‑AGGT‑GCGGG‑GATCA‑GC‑AAAA‑CCCCCACTTTT‑Tccccca > 2:6698056/1‑69 (MQ=255) cGGTTGGGTAACCCCCCCG‑GGCTGGGC‑GG‑TAAG‑GGTG‑GGGGG‑AACCA‑GC‑AACC‑CCGCCACTTTT‑ACCCGA‑tt < 2:2501406/72‑1 (MQ=255) cGGTTCGGTAATTCCCACC‑GGCATGGC‑GGTTTAA‑GGTG‑GGGGG‑AATAA‑GA‑AAAC‑CCCCCCCTTTT‑ccccatt > 1:5892012/1‑69 (MQ=255) cGGTTCGGTAATTCCCACC‑GGCATGGC‑GG‑TTAA‑GGGT‑GCGGG‑GATCA‑GC‑AAAC‑CCCCCCCCTTT‑TCCCGA‑tt > 1:8266792/1‑72 (MQ=255) gtttCGTTAATCCCCGCC‑GGCATGGC‑GG‑TTAG‑GGTT‑GCGGG‑AATCA‑GC‑AACC‑CCGCCACTTTT‑ACCCGA‑ttt < 1:2408820/70‑1 (MQ=255) gTTCGGTAATTCCCACC‑GGCATGGC‑GG‑TTAA‑AGTT‑GCGGG‑AAACA‑GC‑AAAC‑CCGCCACTTTTAACCCCA‑ttt > 1:261160/1‑72 (MQ=255) ttgggTAATCCCCCCC‑GGCATGGC‑GG‑TGAA‑GGTT‑GGGGG‑AAACA‑GC‑AACC‑CCGCCACTTTT‑ACCCGA‑TTTTc < 1:6324503/69‑1 (MQ=255) ttCGGTAATTCCCACC‑GGCATGGC‑GG‑TTAA‑GGTT‑GCGGG‑AATCA‑GC‑AAAC‑CCGCCACTTTT‑ACACGA‑TTTTc < 1:8139307/72‑1 (MQ=255) cGGTAATTCCCACC‑GGCATGGCGGG‑TTAA‑GG‑T‑GTGGG‑GGACA‑GC‑AAACACCCCCCCTTTT‑CCCCCT‑tttttc > 2:4811203/1‑70 (MQ=255) cGGTAATTCCCACC‑GGCATGGC‑GG‑TTAA‑GGTT‑GCGGG‑AATCA‑GC‑AAAC‑CCGCCACTTTT‑ACCCGA‑TTTTccc > 1:1680252/1‑71 (MQ=255) cGGTAATCCCCCCC‑GGCATGGC‑GG‑TTAG‑GGTT‑GCGGG‑AATCA‑GC‑AACC‑CCGCCACTTTT‑ACCCGA‑TTTTCCg < 1:7806341/72‑1 (MQ=255) gTAATTCCCACC‑GGCATGGC‑GG‑GTAA‑AGAT‑GGGGG‑GATCA‑GT‑AAAC‑CCACCACATTT‑AGCCGC‑GTTTTCggg > 1:3943945/1‑71 (MQ=255) tAATTCCCACC‑GGCATGGC‑GG‑TTAA‑GGGT‑GCGGG‑GATCAGGA‑AAAC‑CCCCCCCTTTT‑ACCCGA‑TTTTccctg > 1:3757035/1‑69 (MQ=255) aaTCCCCACC‑GGCATGGC‑GG‑TTAA‑GGTT‑TCGGG‑AATCA‑GC‑AAAC‑CCGCCACTTTT‑ACCCGA‑TTTTCCCGTGc > 1:2304188/1‑72 (MQ=255) atccccccc‑GGCGGGGC‑GG‑TTAG‑GGTT‑GGGGG‑AATCA‑GA‑AACC‑CCGCCACTTTT‑ACCCGA‑TTTTCCGGTGCg < 1:6180119/69‑1 (MQ=255) acccccccc‑GCCGTGGC‑GT‑TTAA‑GGTG‑ACGGG‑AATCA‑CC‑AACC‑CCGCCACTTTT‑ACCCGA‑TTTTCCGGTGCg < 1:1215560/69‑1 (MQ=255) aTTCCCACC‑GGCATGGC‑GG‑TTAA‑GGTT‑GCGGG‑GATCA‑GC‑AAAC‑CCGCCACTTTT‑ACCCGA‑TTTTCCGGTGCg > 2:8520836/1‑72 (MQ=255) aTTCCCACC‑GGCATGGC‑GG‑GTAA‑AGGT‑GGGGG‑GAACA‑GC‑AAAA‑ACCCCCCCTTT‑ATCCGACTTTTCCggggt > 2:5117144/1‑69 (MQ=255) ccccACC‑GGCGTGGG‑GT‑TTAA‑GGTG‑GCGGG‑AATCA‑GA‑AAAC‑CCGCCACTTTT‑ACCCGA‑TTTTCCGGTGCGGc < 1:8704515/71‑1 (MQ=255) cACC‑GGCATGGC‑GG‑TTAA‑TGGT‑GGGGG‑GAACA‑GG‑AAAA‑ACGCCACTTCT‑CCACAA‑TGTTCCTGTGTGGGAgg > 2:3822635/1‑71 (MQ=255) cACC‑GGCATGGC‑GG‑TTAA‑AGTT‑TCGGG‑GAACAGGC‑AAAC‑CCCCCCCTTTT‑CCCCGA‑TTTCCCGG‑GCGGCGGt > 1:6896086/1‑72 (MQ=255) aCC‑GGCATGGC‑GG‑TTAA‑GGGT‑GCGGG‑GATCA‑GC‑AAAA‑CCCCCACTTTT‑ACCCCA‑CTTTCCGGTGCGGCAGTg > 1:8600512/1‑72 (MQ=255) ccgggcgtggc‑‑g‑tTTA‑GGTT‑GGGGGAAATCA‑AA‑AACC‑CCGCCACTTTT‑ACCCGA‑TTTTCCGGTGCGGCAGTg < 1:4565751/69‑1 (MQ=255) c‑GGGATGGG‑GG‑TTAAGGGTG‑GCGGA‑AACCA‑CA‑AACC‑CCGCCACTTTT‑ACCCGA‑TTTTCCGGTGCGGCAGTGa < 1:5445602/72‑1 (MQ=255) gCATGGG‑GG‑TTAG‑GGTG‑GCGGA‑AATCA‑GC‑AACC‑CCGCCACTTTT‑ACCCGA‑TTTTCCGGTGCGGCAGTGAAGt < 1:6234920/72‑1 (MQ=255) ggtgg‑TTAA‑GGTG‑GGGGA‑AATCA‑GA‑AAAC‑CCGCCACTTTT‑ACCCGA‑TTTTCCGGTGCGGCAGTGAAGTACAt < 1:226032/69‑1 (MQ=255) c‑GG‑TTAA‑GGTT‑GCGGG‑AATCA‑GC‑AAAC‑CCGCCACTTTT‑ACCCGA‑TTTTCGGGTGCGGCAGTGACGTACAGCg > 2:2164293/1‑72 (MQ=255) c‑GG‑TTAA‑GGTT‑GCGGG‑AATCA‑GC‑AAAC‑CCGCCACTTTT‑ACCCGA‑TTTTCCGGTGCGGCAGTGAAGTACATCg > 2:2253383/1‑72 (MQ=255) c‑GG‑TTAA‑GGTT‑GCGGG‑AATCA‑GC‑AAAC‑CCGCCACTTTT‑ACCCGA‑TTTTCCGGTGCGGCAGTGAAGTACATCg > 2:8388277/1‑72 (MQ=255) c‑GG‑TAAA‑GTTG‑GGGGA‑AANCA‑CA‑AACC‑CCGCCACTTTT‑ACCCGA‑TTTTCCGGTGCGGCAGTGAAGTACATCg < 1:3397701/72‑1 (MQ=255) gtg‑TTAG‑GTTT‑GCGGG‑AATCA‑GA‑AACC‑CCGCCACTTTT‑ACCCGA‑TTTTCCGGTGCGGCAGTGAAGTACATCg < 2:575702/70‑1 (MQ=255) gg‑TTTA‑GGTTGGCGGA‑AACCA‑CC‑AACC‑CCGCCACTTTT‑ACCCGA‑TTTTCCGGTGCGGCAGTGAAGTACATCg < 2:3074189/72‑1 (MQ=255) gg‑TTAG‑GGGT‑GGGGG‑AAGCA‑AA‑AACC‑CCGCCACTTTT‑ACCCGA‑TTTTCCGGTGCGGCAGTGAAGTACATCGc < 2:4444517/72‑1 (MQ=255) gg‑TTAA‑GGTT‑GCGGG‑AATCA‑GC‑AAAC‑CCGCCACTTTT‑ACCCGA‑TTTTCCGGTGCGGCAGTGAAGTACATCGc > 1:8020282/1‑72 (MQ=255) gg‑TTAA‑GGTT‑GCGGG‑AATCA‑GC‑AAAC‑CCGCCACTTTT‑ACCCGA‑TTTTCCGGTGCGGCAGTGAAGTACATCGc > 1:8050496/1‑72 (MQ=255) tttAG‑GGTT‑GCGAA‑AATCA‑CA‑AACC‑CCGCCACTTTT‑ACCCGA‑TTTTCCGGTGCGGCAGTGAAGTACATCGCt < 2:1674833/71‑1 (MQ=255) ttAA‑GGTT‑GGGGA‑AACCA‑AA‑AAAC‑CCGCCACTTTT‑ACCCGA‑TTTTCCGGTGCGGCAGTGAAGTACATCGCTa < 2:3843612/72‑1 (MQ=255) ttAA‑GGTT‑GCGGG‑AATCA‑GC‑AAAC‑CCGCCACTTTT‑ACCCGA‑TTTTCCGGTGCGGCAGTGAAGTACATCGCTa > 1:2030065/1‑72 (MQ=255) gtAA‑GGGT‑GGGGGAAACCA‑AC‑AACC‑CCGCCACTTTT‑ACCCGA‑TTTTCCGGTGCGGCAGTGAAGTACATCGCt < 2:7481405/71‑1 (MQ=255) tAA‑GGTT‑GCGGG‑AATCA‑GC‑AAAC‑CCGCCACTTTT‑ACCCGA‑TTTTCCGGTGCGGCAGTGAAGTACATCGCTaa > 1:7570623/1‑72 (MQ=255) tAA‑GGTT‑GCGGG‑AATCA‑GC‑AAAC‑CCGCCACTTTT‑ACCCGA‑TTTTCCGGTGCGGCAGTGAAGTACATCGCTaa > 2:4642947/1‑72 (MQ=255) a‑GGTT‑GCGGG‑AATCA‑GC‑AAAC‑CCGCCACTTTT‑ACCCGA‑TTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAg > 2:7427558/1‑72 (MQ=255) a‑GGTT‑GCGGG‑AATCA‑GC‑AAAC‑CCGCCACTTTT‑ACCCGA‑TTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAg > 2:6807591/1‑72 (MQ=255) a‑GGTG‑GGGGA‑AACCA‑GC‑AACC‑CCGCCACTTTT‑ACCCGA‑TTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAg < 1:4379848/72‑1 (MQ=255) ggTT‑GCGGG‑AATCA‑GC‑AAAC‑CCGCCACTTTT‑ACCCGA‑TTTTCAGGTGCGGCAGTGAAGTACATCGCTAAAGa > 2:3314593/1‑72 (MQ=255) gTT‑GGGGG‑AAACC‑GC‑AAAC‑CCGCCACTTTT‑ACCCGA‑TTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGaa < 1:1981022/72‑1 (MQ=255) tt‑GCGGG‑AATCA‑GC‑AAAC‑CCGCCACTTTT‑ACCCGA‑TTTTCCGGTGNGGCAGTGAAGTACATCGCTAAAGaaa > 1:599894/1‑72 (MQ=255) t‑GCGGG‑AATCA‑GC‑AAAC‑CCGCCACTTTT‑ACCCGA‑TTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAAt > 2:8665297/1‑72 (MQ=255) t‑GCGGG‑AATCA‑GC‑AAAC‑CCGCCACTTTT‑ACCCGA‑TTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAAt > 1:4859535/1‑72 (MQ=255) gCGGG‑AATCA‑GC‑AAAC‑CCGCCACTTTT‑ACCCGA‑TTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATg > 1:4230706/1‑72 (MQ=255) gCGAG‑ATTCA‑GC‑AACC‑GCGCCACTTTT‑ACCCGA‑TTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATg < 1:3467476/72‑1 (MQ=255) cGGG‑AATCA‑GC‑AAAC‑CCGCCACTTTT‑ACCCGA‑TTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGc > 1:5899137/1‑72 (MQ=255) ggg‑AATCA‑GC‑AACC‑CCGCCACTTTT‑ACCCGA‑TTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGcc < 1:7009280/72‑1 (MQ=255) ggaaaTCA‑GA‑AGAC‑CCGCCACTTTT‑ACCCGA‑TTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGcc < 1:304105/69‑1 (MQ=255) gg‑AATCA‑GC‑AAAC‑CCGCCACTTTT‑ACCCGA‑TTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGccc > 2:8546359/1‑72 (MQ=255) ag‑AATCA‑GC‑AAAC‑CCGCCACTTTT‑ACCCGA‑TTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGccc < 1:2362900/71‑1 (MQ=255) aaTCA‑GC‑AAAC‑CCGCCACTTTT‑ACCCGA‑TTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGcccgc > 1:1189194/1‑70 (MQ=255) aTCA‑GC‑AACC‑CCGCCACTTTT‑ACCCGA‑TTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCACg < 1:349029/72‑1 (MQ=255) aTCA‑GC‑AAAC‑CCGCCACTTTT‑ACCCGA‑TTTTCCGCTGCGGCAGTGAAGTACATCGCTACAGTAATGCCCAca > 2:2731292/1‑71 (MQ=255) aTCA‑GC‑AAAC‑ACGCCACTTTT‑ACCCGA‑TTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCACg < 1:7205551/72‑1 (MQ=255) tCA‑CC‑AACC‑CCGCCACTTTT‑ACCCGA‑TTTTCCGGTGCGTCAGTGAAGTACATCGCTAAAGAAATGCCCACgg < 2:7765754/72‑1 (MQ=255) cA‑GC‑AACC‑CCGCCACTTTT‑ACCCGA‑TTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCACGGc < 1:6654105/72‑1 (MQ=255) a‑GC‑AACC‑CCGCCACTTTT‑ACCCGA‑TTTTCCGGTGCGGCATTGAAGTACATCGCTAAAGAAATGCCCACGGCa < 2:3960750/72‑1 (MQ=255) a‑GC‑AAAC‑CCGCCACTTTT‑ACCCGA‑TTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCTCACGGCa > 1:5544673/1‑72 (MQ=255) a‑GC‑AAAC‑CCGCCACTTTT‑ACCCGA‑TTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCACGGCa > 1:5204999/1‑72 (MQ=255) acc‑AACC‑CCGCCACTTTT‑ACCCGA‑TTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCACGGCa < 1:2274348/70‑1 (MQ=255) ac‑AACC‑CCGCCACTTTT‑ACCCGA‑TTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCACGGCAc < 2:139013/71‑1 (MQ=255) c‑AAAC‑CCGCCACTTTT‑ACCCGA‑TTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCACGGCAcc > 2:6415439/1‑72 (MQ=255) c‑AAAC‑CCGCCACTTTT‑ACCCGA‑TTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCACGGCAcc < 1:3966426/72‑1 (MQ=255) aaaaaC‑CCGCCACTTTT‑ACCCGA‑TTTTCCGGAGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCACGGCAc < 1:276076/70‑1 (MQ=255) aaaC‑CCGCCACTTTT‑ACCCGA‑TTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCACGGCACCa > 2:7005520/1‑72 (MQ=255) aaaC‑CCGCCACTTTT‑ACCCGA‑TTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCACGGCACCa > 2:1955670/1‑72 (MQ=255) aaaC‑CCGCCACTTTT‑ACCCGA‑TTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCACGGCACCa > 2:8408022/1‑72 (MQ=255) aaC‑CCGCCACTTTT‑ACCCGA‑TTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCACGGCACCaa > 2:5418925/1‑72 (MQ=255) aaC‑CCGCCACTTTT‑ACCCGA‑TTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCACGGCACCaa < 2:2911396/72‑1 (MQ=255) aaC‑CCGCCACTTTT‑ACCCGA‑TTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCACGGCACCaa > 2:3188851/1‑72 (MQ=255) | AACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACC‑GGCATGGC‑GG‑TTAA‑GGTT‑GCGGG‑AATCA‑GC‑AAAC‑CCGCCACTTTT‑ACCCGA‑TTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCACGGCACCAA > NC_012967/3823046‑3823187 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |