BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP002094	592381 =	106 (1.060)	3 (0.040) +GCTCATGATGGAGGATACAGGGC	3/150	12.1	3.6%	noncoding (5/76 nt)	LLNZ_t13323	tRNA‑Lys
*	?	CP002094	2131656 =	NA (NA)	3 (0.040) +GCTCATGATGGAGGATACAGGGC	3/150	12.1	3.6%	noncoding (58/73 nt)	LLNZ_t13355	tRNA‑Val
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 107 total aligned reads displayed.

TTGAATAAAAAATAGAAAAATTACAGTTGAGACTAGAAATTTGCGAAAGTCTGTGTTATAATATATTTCGTTGTGAAAATGACGCCTTAAGTATGACTCGTTAGCTCAGTTGGTAGAGCATTTGACTTTTAATCAAAGGGTCGCTGGTTCGAGCCCAGCACGGGTCACTAAATTTATTGAAGAAAAGATTGTGGGGA  >  CP002094/592283‑592479

ttGAATAAAAAATAGAAAAATTACAGTTGAGACTAGAAATTTGCGAAAGTCTGTGTTATAATATATTTCGTTGTGAAAATGACGCCTTAAGTATGACTc                                                                                                    <  2:951290/99‑1 (MQ=255)

  gAATAAAAAATAGAAAAATTACAGTTGAGACTAGAAATTTGCGAAGGTCTGTGTCATAATATATTTCGTTGTGAAAATGACGCCGTAAGTCTGACTCGt                                                                                                  >  2:187837/1‑99 (MQ=255)

     tAAAAAATAGAAAAATTACAGTTGAGACTAGAAATTTGCGAAAGTCTGTGTTATAATATATTTCGTTGTGAAAATGACGCCTTAAGTATGACTCGTTAg                                                                                               <  1:1218169/99‑1 (MQ=255)

     tAAAAAATAGAAAAATTACAGTTGAGACTAGAAATTTGCGAAAGTCTGTGCTATAATATATTTCGTTGTGAAAATGACGCCTTAAGTATGACTCGtttt                                                                                               >  1:783048/1‑97 (MQ=255)

      aaaaaaTAGAAAAATTACAGTTGAGACTAGAAATTTGCGAAAGTCTGTGTTATAATATATTTCGTTGTGAAAATGACGCCTTAAGTATGACTCGTTAGc                                                                                              <  1:1275232/99‑1 (MQ=255)

       aaaaaTAGAAAAATTACAGTTGAGACTAGAAATTTGCGAAAGTCTGTGTTATAATATATTTCGTTGTGAAAATGACGCCTTAAGTATGACTCGTTAGCt                                                                                             <  2:1507142/99‑1 (MQ=255)

       aaaaaTAGAAAAATTACAGTTGAGACTAGAAATTTGCGAAAGTCTGTGTTATAATATATTTCGTTGTGAAAATGACGCCTTAAGTATGACTCGTTAGCt                                                                                             <  2:535583/99‑1 (MQ=255)

        aaaaTAGAAAAATTACAGTTGAGACTAGAAATTTGCGAAAGTCTGTGTTATAATATATTTCGTTGTGAAAATGACGCCTTAAGTATGACTCGTTAGCTc                                                                                            <  2:1618826/99‑1 (MQ=255)

          aaTAGAAAAATTACAGTTGAGACTAGAAATTTGCGAAAGTCTGTGTTATAATATATTTCGTTGTGAAAATGACGCCTTAAGTATGACTCGTTAGCTCAg                                                                                          <  2:754319/99‑1 (MQ=255)

          aaTAGAAAAATTACAGTTGAGACTAGAAATTTGCGAAAGTCTGTGTTATAATATATTTCGTTGTGAAAATGACGCCTTAAGTATGACTCGTTAGCTCAg                                                                                          >  2:840879/1‑99 (MQ=255)

          aaTAGAAAAATTACAGTTGAGACTAGAAATTTGCGAAAGTCTGTGTTATAATATATTTCGTTGTGAAAATGACGCCTTAAGTATGACTCGTTAGCTCAg                                                                                          <  2:225363/99‑1 (MQ=255)

          aaTAGAAAAATTACAGTTGAGACTAGAAATTTGCGAAAGTCTGTGTTATAATATATTTCGTTGTGAAAATGACGCCTTAAGTATGACTCGTTAGCTCAg                                                                                          <  1:1367450/99‑1 (MQ=255)

           aTAGAAAAATTACAGTTGAGACTAGAAATTTGCGAAAGTCTGTGTTATAATATATTTCGTTGTGAAAATGACGCCTTAAGTATGACTCGTTAGCTCAGt                                                                                         >  2:1486946/1‑99 (MQ=255)

           aTAGAAAAATTACAGTTGAGACTAGAAATTTGCGAAAGTCTGTGTTATAATATATTTCGTTGTGAAAATGACGCCTTAAGTATGACTCGTTAGCTCAGt                                                                                         >  1:123231/1‑99 (MQ=255)

           aTAGAAAAATTACAGTTGAGACTAGAAATTTGCGAAAGTCTGTGTTATAATATATTTCGTTGTGAAAATGACGCCTTAAGTATGACTCGTTAGCTCAGt                                                                                         >  2:1595798/1‑99 (MQ=255)

            tAGAAAAATTACAGTTGAGACTAGAAATTTGCGAAAGTCTGTGTTATAATATATTTCGTTGTGAAAATGACGCCTTAAGTATGACTCGTTAGCTCAGtt                                                                                        >  1:810263/1‑99 (MQ=255)

               aaaaaTTACAGTTGAGACTAGAAATTTGCGAAAGTCTGTGTTATAATATATTTCGTTGTGAAAATGACGCCTTAAGTATGACTCGTTAGCTCCGTTGGt                                                                                     >  2:483476/1‑99 (MQ=255)

               aaaaaTTACAGTTGAGACTAGAAATTTGCGAAAGTCTGTGTTATAATATATTTCGTTGTGAAAATGACGCCTTAAGTATGACTCGTTAGCTCAGTTGGt                                                                                     >  1:1474662/1‑99 (MQ=255)

               aaaaaGTAGATTTGAGACTAGAAATTTGCGAAAGTCTGTGTTATAATATATTTCGTTGTGAAAATGACGCCTTAAGTATGACTCGTTAGCTCAGTTGGt                                                                                     <  1:1455696/99‑1 (MQ=255)

                 aaaTTACAGTTGAGACTAGAAATTTGCGAAAGTCTGTGTTATAATATATTTCGTTGTGAAAATGACGCCTTAAGTATGACTCGTTAGCTCAGTTGGTag                                                                                   <  1:753339/99‑1 (MQ=255)

                   aTTACAGTTGAGACTAGAAATTTGCGAAAGTCTGTTTTATAATATATTTCGTTGTGAAAATGACGCCTTAAGTATGACTCGTTAGCTCAGTTGGTagag                                                                                 <  2:380969/99‑1 (MQ=255)

                   aTTACAGTTGAGACTAGAAATTTGCGAAAGTCTGTGTTATAATATATTTCGTTGTGAAAATGACGCCTTAAGTATGACTCGTTAGCTCAGTTGGTagag                                                                                 >  1:904319/1‑99 (MQ=255)

                   aTTACAGGTGAGACTAGAAATTTGCGAAAGTCTGTGTTATAATATATTTCGTTGTGAAAATGACGCCTTAAGTATGACTCGTTAGCTCAGTTGGTagag                                                                                 <  2:1015897/99‑1 (MQ=255)

                    ttACAGTTGAGACTAGAAATTTGCGAAAGTCTGTGTTATAATATATTTCGTTGTGAAAATGACGCCTTAAGTATGACTCGTTAGCTCAGTTGGTAGAGc                                                                                >  1:534588/1‑99 (MQ=255)

                     tACAGTTGAGACTAGAAATTTGCGAAAGTCTGTGTTATAATATATTTCGTTGTGAAAATGACGCCTTAAGTATGACTCGTTAGCTCAGTTGGTAGAGCa                                                                               >  1:605508/1‑99 (MQ=255)

                       cAGTTGAGACTAGAAATTTGCGAAAGTCTGTGTTATAATATATTTCGTTGTGAAAATGACGCCTTAAGTATGACTCGTTAGCTCAGTTGGTAGAGCAtt                                                                             <  1:328283/99‑1 (MQ=255)

                        aGTTGAGACTAGAAATTTGCGAAAGTCTGTGTTATAATATATTTCGTTGTGAAAATGACGCCTTAAGTATGACTCGTTAGCTCAGTTGGTAGAGCAttt                                                                            <  2:914843/99‑1 (MQ=255)

                          ttGAGACTAGAAATTTGCGAAAGTCTGTGTTATAATATATTTCGTTGTGAAAATGACGCCTTAAGTATGACTCGTTAGCTCAGTTGGTAGAGCATTTGa                                                                          <  2:1149787/99‑1 (MQ=255)

                             agaCTAGAAATTTGCGAAAGTCTGTGTTATAATATATTTCGTTGTGAAAATGACGCCTTAAGTATGACTCGTTAGCTCAGTTGGTAGAGCATTTGACtt                                                                       >  2:1404927/1‑99 (MQ=255)

                              gaCTAGAAATTTGCGAAAGTCTGTGTTATAATATATTTCGTTGTGAAAATGACGCCTTAAGTATGACTCGTTAGCTCAGTTGGTAGAGCATTTGACttt                                                                      <  2:1286262/99‑1 (MQ=255)

                              gaCTAGAAATTTGCGAAAGTCTGTGTTATAATATATTTCGTTGTGAAAATGACGCCTTAAGTATGACTCGTTAGCTCAGTTGGTAGAGCATTTGACttt                                                                      <  2:728791/99‑1 (MQ=255)

                                cTAGAAATTTGCGAAAGTCTGTGTTATAATATATTTCGTTGTGAAAATGACGCCTTAAGTATGACTCGTTAGCTCAGTTGGTAGAGCATTTGACTTTTa                                                                    >  2:1117029/1‑99 (MQ=255)

                                cTAGAAATTTGCGAAAGTCTGTGTTATAATATATTTCGTTGTGAAAATGACGCCTTAAGTATGACTCGTTAGCTCAGTTGGTAGAGCATTTGACTTTTa                                                                    >  2:911344/1‑99 (MQ=255)

                                 tAGAAATTTGCGAAAGTCTGTGTTATAATATATTTCGTTGTGAAAATGACGCCTTAAGTATGACTCGTTAGCTCAGTTGGTAGAGCATTTGACTTTTaa                                                                   <  2:1024801/99‑1 (MQ=255)

                                 tAGAAATTTGCGAAAGTCTGTGTTATAATATATTTCGTTGTGAAAATGACGCCTTAAGTATGACTCGTTAGCTCAGTTGGTAGAGCATTTGACTTTTaa                                                                   >  2:924895/1‑99 (MQ=255)

                                 tAGAAATTTGCGAAAGTCTGTGTTATAATATATTTCGTTGTGAAAATGACGCCTTAAGTATGACTCGTTAGCTCAGTTGGTAGAGCATTTGACTTTTaa                                                                   >  2:539397/1‑99 (MQ=255)

                                   gAAATTTGCGAAAGTCTGTGTTATAATATATTTCGTTGTGAAAATGACGCCTTAAGTATGACTCGTTAGCTCAGTTGGTAGAGCATTTGACTTTTAATc                                                                 <  1:384840/99‑1 (MQ=255)

                                   gAAATTTGCGAAAGTCTGTGTTATAATATATTTCGTTGTGAAAATGACGCCTTAAGTATGACTCGTTAGCTCAGTTGGTAGAGCATTTGACTTTTAATc                                                                 >  1:1226275/1‑99 (MQ=255)

                                   gAAATTTGCGAAAGTCTGTGTTATAATATATTTCGTTGTGAAAATGACGCCTTAAGTATGACTCGTTAGCTCAGTTGGTAGAGCATTTGACTTTTAATc                                                                 <  1:1253032/99‑1 (MQ=255)

                                   gAAATTTGCGAAAGTCTGTGTTATAATATATTTCGTTGTGAAAATGACGCCTTAAGTATGACTCGTTAGCTCAGTTGGTAGAGCATTTGACTTTTAATc                                                                 >  1:992126/1‑99 (MQ=255)

                                     aaTTTGCGAAAGTCTGTGTTATAATATATTTCGTTGTGAAAATGACGCCTTAAGTATGACTCGTTAGCTCAGTTGGTAGAGCATTTGACTTTTAATCaa                                                               <  1:1209292/99‑1 (MQ=255)

                                     aaTTTGCGAAAGTCTGTGTTATAATATATTTCGTTGTGAAAATGACGCCTTAAGTATGACTCGTTAGCTCAGTTGGTAGAGCATTTGACTTTTAATCaa                                                               >  2:56379/1‑99 (MQ=255)

                                       tttGCGAAAGTCTGTGTTATAATATATTTCGTTGTGAAAATGACGCCTTAAGTATGACTCGTTAGCTCAGTTGGTAGAGCATTTGACTTTTAATCAAAg                                                             >  2:121866/1‑99 (MQ=255)

                                       tttGCGAAAGTCTGTGTTATAATATATTTCGTTGTGAAAATGACGCCTTAAGTATGACTCGTTAGCTCAGTTGGTAGAGCATTTGACTTTTAATCAAAg                                                             >  1:1165466/1‑99 (MQ=255)

                                         tGCGAAAGTCTGTGTTATAATATATTTCGTTGTGAAAATGACGCCTTAAGTATGACTCGTTAGCTCAGTTGGTAGAGCATTTGACTTTTAATCAAAggg                                                           <  2:393029/99‑1 (MQ=255)

                                          gCGAAAGTCTGTGTTATAATATATTTCGTTGTGAAAATGACGCCTTAAGTATGACTCGTTAGCTCAGTTGGTAGAGCATTTGACTTTTAATCAAAGGGt                                                          <  1:1643002/99‑1 (MQ=255)

                                          gCGAAAGTCTGTGTTATAATATATTTCGTTGTGAAAATGACGCCTTAAGTATGACTCGTTAGCTCAGTTGGTAGAGCATTTGACTTTTAATCAAAGGGt                                                          <  2:397592/99‑1 (MQ=255)

                                             aaaGTCTGTGTTATAATATATTTCGTTGTGAAAATGACGCCTTAAGTATGACTCGTTAGCTCAGTTGGTAGAGCATTTGACTTTTAATCAAAGGGTCGc                                                       <  2:123231/99‑1 (MQ=255)

                                             aaaGTCTGTGTTATAATATATTTCGTTGTGAAAATGACGCCTTAAGTATGACTCGTTAGCTCAGTTGGTAGAGCATTTGACTTTTAATCAAAGGGTCGc                                                       >  1:869515/1‑99 (MQ=255)

                                             aaaGTCTGTGTTATAATATATTTCGTTGTGAAAATGACGCCTTAAGTATGACTCGTTAGCTCAGTTGGTAGAGCATTTGACTTTTAATCAAAGGGTCGc                                                       <  1:112204/99‑1 (MQ=255)

                                              aaGTCTGTGTTATAATATATTTCGTTGTGAAAATGACGCCTTAAGTATGACTCGTTAGCTCAGTTGGTAGAGCATTTGACTTTTAATCAAAGGGTCGCt                                                      >  2:301953/1‑99 (MQ=255)

                                                gTCTGTGTTATAATATATTTCGTTGTGAAAATGACGCCTTAAGTATGACTCGTTAGCTCAGTTGGTAGAGCATTTGACTTTTAATCAAAGGGTCGCTgg                                                    >  1:972906/1‑99 (MQ=255)

                                                gTCTGTGTTATAATATATTTCGTTGTGAAAATGACGCCTTAAGTATGACTCGTTAGCTCAGTTGGTAGAGCATTTGACTTTTAATCAAAGGGTCGCTgg                                                    >  1:552687/1‑99 (MQ=255)

                                                gTCTGTGTTATAATATATTTCGTTGTGAAAATGACGCCTTAAGTATGACTCGTTAGCTCAGTTGGTAGAGCATTTGACTTTTAATCAAAGGGTCGCTgg                                                    >  2:1596394/1‑99 (MQ=255)

                                                   tgtgTTATAATATATTTCGTTGTGAAAATGACGCCTTAAGTATGACTCGTTAGCTTAGTTGGTAGAGCATTTGACTTTTAATCAAAGGGTCGCTGGTTc                                                 >  2:167922/1‑99 (MQ=255)

                                                   tgtgTTATAATATATTTCGTTGTGAAAATGACGCCTTAAGTATGACTCGTTAGCTCAGTTGGTAGAGCATTTGACTTTTAATCAAAGGGTCGCTGGTTc                                                 >  2:608636/1‑99 (MQ=255)

                                                    gtgtTATAATATATTTCGTTGTGAAAATGACGCCTTAAGTATGACTCGTTAGCTCCGTTGGTAGAGCATTTGATTTTTAATCAAAGGGTCGCTGGTTCg                                                >  1:751615/1‑99 (MQ=255)

                                                     tgtTATAATATATTTCGTTGTGAAAATGACGCCTTAAGTATGACTCGTTAGCTCAGTTGGTAGAGCATTTGACTTTTAATCAAAGGGTCGCTGGTTCGa                                               >  1:1315789/1‑99 (MQ=255)

                                                      gtTATAATATATTTCGTTGTGAAAATGACGCCTTAAGTATGACTCGTTAGCTCAGTTGGTAGAGCATTTGACTTTTAATCAAAGGGTCGCTGGTTCGAg                                              <  2:362233/99‑1 (MQ=255)

                                                        tataATATATTTCGTTGTGAAAATGACGCCTTAAGTATGACTCGTTAGCTCAGTTGGTAGAGCATTTGACTTTTAATCAAAGGGTCGCTGGTTCGAGcc                                            <  1:685330/99‑1 (MQ=255)

                                                         ataataTATTTCGTTGTGAAAATGACGCCTTGAGTATGACTCGTTAGCTCAGTTGGTAGAGCATTTGACTTTTAATCAAAGGGTCGCTGGTTCGAGccc                                           <  1:694089/99‑1 (MQ=255)

                                                         ataataTATTTCGTTGTGAAAATGACGCCTTAAGTATGACTCGTTAGCTCAGTTGGTAGAGCATTTGACTTTTAATCAAAGGGTCGCTGGTTCGAGccc                                           <  2:438042/99‑1 (MQ=255)

                                                         ataataTATTTCGTTGTGAAAATGACGCCTTAAGTATGACTCGTTAGCTCAGTTGGTAGAGCATTTGACTTTTAATCAAAGGGTCGCTGGTTCGAGccc                                           >  2:1340661/1‑99 (MQ=255)

                                                          taataTATTTCGTTGTGAAAATGACGCCTTAAGTATGACTCGTTAGCTCAGTTGGTAGAGCATTTGACTTTTAATCAAAGGGTCGCTGGTTCGAGCCCa                                          >  2:1458580/1‑99 (MQ=255)

                                                           aataTATTTCGTTGTGAAAATGACGCCTTAAGTATGACTCGTTAGCTCAGTTGGTAGAGCATTTGACTTTTAATCAAAGGGTCGCTGGTTCGAGCCCAg                                         <  2:114265/99‑1 (MQ=255)

                                                            atatatTTCGTTGTGAAAATGACGCCTTAAGTATGACTCGTTAGCTCAGTTGGTAGAGCATTTGACTTTTAATCAAAGGGTCGCTGGTTCGAGCCCAGc                                        >  2:339757/1‑99 (MQ=255)

                                                             tttatTTCGTTGTGAAAATGACGCCTTAAGTATGACTCGTTAGCTCAGTTGGTAGAGCATTTGACTTTTAATCAAAGGGTCGCTGGTTCGAGCCCAGCa                                       <  1:1626253/97‑1 (MQ=255)

                                                             tatatTTCGTTGTGAAAATGACGCCTTAAGTATGACTCGTTAGCTCAGTTGGTAGAGCATTTGACTTTTAATCAAAGGGTCGCTGGTTCGAGCCCAGCa                                       <  2:153283/99‑1 (MQ=255)

                                                               tatTTCGTTGTGAAAATGACGCCTTAAGTATGACTCGTTAGCTCAGTTGGTAGAGCATTTGACTTTTAATCAAAGGGTCGCTGGTTCGAGCCCAGCACg                                     >  2:1591793/1‑99 (MQ=255)

                                                                 tttCGTTGTGAAAATGACGCCTTAAGTATGACTCGTTAGCTCAGTTGGTAGAGCATTTGACTTTTAATCAAAGGGTCGCTGGTTCGAGCCCAGCACggg                                   <  1:1586091/99‑1 (MQ=255)

                                                                 tttCGTTGTGAAAATGACGCCTTAAGTATGACTCGTTAGCTCAGTTGGTAGAGCATTTGACTTTTAATCAAAGGGTCGCTGGTTCGAGCCCAGCACggg                                   <  2:1142144/99‑1 (MQ=255)

                                                                     gTTGTGAAAATGACGCCTTAAGTATGACTCGTTAGCTCAGTTGGTAGAGCATTTGACTTTTAATCAAAGGGTCGCTGGTTCGAGCCCAGCACGGGTCAc                               <  1:499396/99‑1 (MQ=255)

                                                                     gTTGTGAAAATGACGCCTTAAGTATGACTCGTTAGCTCAGTTGGTAGAGCATTTGACTTTTAATCAAAGGGTCGCTGGTTCGAGCCCAGCACGGGTCAc                               <  1:593779/99‑1 (MQ=255)

                                                                     gTTGTGAAAATGACGCCTTAAGTATGACTCGTTAGCTCAGTTGGTAGAGCATTTGACTTTTAATCAAAGGGTCGCTGGTTCGAGCCCAGCACGGGTCAc                               <  1:1099988/99‑1 (MQ=255)

                                                                      ttGTGAAAATGACGCCTTAAGTATGACTCGTTAGCTCAGTTGGTAGAGCATTTGACTTTTAATCAAAGGGTCGCTGGTTCGAGCCCAGCACGGGTCACt                              >  2:484858/1‑99 (MQ=255)

                                                                      ttGTGAAAATGACGCCTTAAGTATGACTCGTTAGCTCAGTTGGTAGAGCATTTGACTTTTAATCAAAGGGTCGCTGGTTCGAGCCCAGCACGGGGCACt                              >  2:590408/1‑99 (MQ=255)

                                                                       tgtgAAAATGACGCCTTAAGTATGACTCGTTAGCTCAGTTGGTAGAGCATTTGACTTTTAATCAAAGGGTCGCTGGTTCGAGCCCAGCACGGGTCACTa                             >  1:1222913/1‑99 (MQ=255)

                                                                         tgAAAATGACGCCTTAAGTATGACTCGTTAGCTCAGTTGGTAGAGCATTTGACTTTTAATCAAAGGGTCGCTGGTTCGAGCCCAGCACGGGTCACTaaa                           >  1:1394183/1‑99 (MQ=255)

                                                                           aaaaTGACGCCTTAAGTATGACTCGTTAGCTCAGTTGGTAGAGCATTTGACTTTTAATCAAAGGGTCGCTGGTTCGAGGCCAGCACGGGTCACTAAAtt                         >  1:913854/1‑99 (MQ=255)

                                                                           aaaaTGACGCCTTAAGTATGACTCGTTAGCTCAGTTGGTAGAGCATTTGACTTTTAATCAAAGGGTCGCTGGTTCGAGCCCAGCACGGGTCACTAAAtt                         <  2:155159/99‑1 (MQ=255)

                                                                             aaTGACGCCTTAAGTATGACTCGTTAGCTCAGTTGGTAGAGCATTTGACTTTTAATCAAAGGGTCGCTGGTTCGAGCCCAGCACGGGTCACTAAATTTa                       >  1:372895/1‑99 (MQ=255)

                                                                              aTGACGCCTTAAGTATGACTCGTTAGCTCAGTTGGTAGAGCATTTGACTTTTAATCAAAGGGTCGCTGGTTCGAGCCCAGCACGGGTCACTAAATTTAt                      >  2:684063/1‑99 (MQ=255)

                                                                               tGACGCCTTAAGTATGACTCGGTTGCTCAGTTGGTAGAGGATTTGACTTTTAATCAAAGGGTCGCTGGTTCGAGCCCAGCACGGGTCACTAAATTTAtt                     >  2:1244677/1‑99 (MQ=255)

                                                                                  cGCCTTAAGTATGACTCGTTAGCTCAGTTGGTAGAGCATTTGACTTTTAATCAAAGGGTCGCTGGTTCGAGCCCAGCACGGGTCACTAAATTTATTgaa                  <  2:696523/99‑1 (MQ=255)

                                                                                  cGCCTTAAGTATGACTCGTTAGCTCAGTTGGTAGAGCATTTGACTTTTAATCAAAGGGTCGCTGGTTCGAGCCCAGCACGGGTCACTAAATTTATTgaa                  >  1:460323/1‑99 (MQ=255)

                                                                                  cGCCTTAAGTACGACTCGTTAGCTCAGTTGGTAGAGCATTTGACTTTTAATCAAAGGGTCGCTGGTTCGAGCCCAGCACGGGTCACTAAATTTATTgaa                  <  1:1096719/99‑1 (MQ=255)

                                                                                    ccTTAAGTATGACTCGTTAGCTCAGTTGGTAGAGCATTTGACTTTTAATCAAAGGGTCGCTGGTTCGAGCCCAGCACGGGTCACTAAATTTATTgaaga                >  1:761629/1‑99 (MQ=255)

                                                                                      ttAAGTATGACTCGTTAGCTCAGTTGGTAGAGCATTTGACTTTTAATCAAAGGGTCGCTGGTTCGAGCCCAGCACGGGTCACTAAATTTATTGAAGaaa              >  2:490033/1‑99 (MQ=255)

                                                                                       tAAGTATGACTCGTTAGTTCAGTTGGTAGAGCATTTGACTTTTAATCAAAGGGTCGCTGGTTCGAGCCCAGCACGGGTCACTAAATTTATTGAAGaaaa             >  2:598885/1‑99 (MQ=255)

                                                                                         aGTATGACTCGTTAGCTCAGTTGGTAGAGCATTTGACTTTTAATCAAAGGGTCGCTGGTTCGAGCCCAGCACGGGTCACTAAATTTATTGAAGAAAAGa           >  2:549533/1‑99 (MQ=255)

                                                                                         aGTATGACTCGTTAGCTCAGTTGGTAGAGCATTTGACTTTTAATCAAAGGGTCGCTGGTTCGAGCCCAGCACGGGTCACTAAATTTATTGAAGAAAAGa           <  2:740490/99‑1 (MQ=255)

                                                                                          gTATGACTCGTTAGCTCAGTTGGTAGAGCATTTGACTTTTAATCAAAGGGTCGCTGGTTCGAGCCCAGCACGGGTCACTAAATTTATTGAAGAAAAGAt          <  1:127405/99‑1 (MQ=255)

                                                                                           tATGACTCGTTAGCTCAGTTGGTAGAGCATTTGACTTTTAATCAAAGGGTCGCTGGTTCGAGCCCAGCACGGGTCACTAAATTTATTGAAGAAAAGAtt         >  1:1012919/1‑99 (MQ=255)

                                                                                           tATGACTCGTTAGCTCAGTTGGTAGAGCATTTGACTTTTAATCAAAGGGTCGCTGGTTCGAGCCCAGCACGGGTCACTAAATTTATTGAAGAAAAGAtt         >  1:1133913/1‑99 (MQ=255)

                                                                                            aTGACTCGTTAGCTCAGTTGGTAGAGCATTTGACTTTTAATCAAAGGGTCGCTGGTTCGAGCCCAGCACGGGTCACTAAATTTATTGAAGAAAAGATtg        >  1:1126790/1‑99 (MQ=255)

                                                                                             tGACTCGTTAGCTCAGTTGGTAGAGCATTTGACTTTTAATCAAAGGGTCGCTGGTTCGAGCCCAGCACGGGTCACTAAATTTATTGAAGAAAAGATtgt       <  1:970476/99‑1 (MQ=255)

                                                                                             tGACCCGTTAGCTCAGTTGGTAGAGCATTTGACTTTTAATCAAAGGGTCGCTGGTTCGAGCCCAGCACGGGTCACTAAATTTATTGAAGAAAAGATtgt       <  1:830889/99‑1 (MQ=255)

                                                                                               aCTCGTTAGCTCAGTTGGTAGAGCATTTGACTTTTAATCAAAGGGTCGCTGGTTCGAGCCCAGCACGGGTCACTAAATTTATTGAAGAAAAGATTGTgg     >  1:218128/1‑99 (MQ=255)

                                                                                                 tCGTTAGCTCAGTTGGTAGAGCATTTGACTTTTAATCAAAGGGTCGCTGGTTCGAGCCCAGCACGGGTCACTAAATTTATTGAAGAAAAGATTGTgggg   >  1:1414176/1‑99 (MQ=255)

                                                                                                  cGTTAGCTCAGTTGGTAGAGCATTTGACTTTTAATCAAAGGGTCGCTGGTTCGAGCCCAGCACGGGTCACTAAATTTATTGAAGAAAAGATTGTGGGGa  <  1:1307720/99‑1 (MQ=255)

TTGAATAAAAAATAGAAAAATTACAGTTGAGACTAGAAATTTGCGAAAGTCTGTGTTATAATATATTTCGTTGTGAAAATGACGCCTTAAGTATGACTCGTTAGCTCAGTTGGTAGAGCATTTGACTTTTAATCAAAGGGTCGCTGGTTCGAGCCCAGCACGGGTCACTAAATTTATTGAAGAAAAGATTGTGGGGA  >  CP002094/592283‑592479

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.