BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP002094	2,396,538	T→C	D73G (GAC→GGC)	LLNZ_12635 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP002094	2,396,538	0	T	C	100.0%	406.1 / NA	101	D73G (GAC→GGC)	LLNZ_12635	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (52/49); total (52/49)

Only 100 of 101 total aligned reads displayed.

TCAAAACACGCTCTGCTGACATTTTTAATAATTGAAATTTCTCAGGCTCTTTCGTCATCTTGATATTTTCCAAAATGACTTGTTGAGCTGCTCGGTCTTTTTCAACAAGAAGGGCATGATCCATTCCTCTTGAGACGGCTTCAATTGCCAAACTTCCTGACCCTGCAAATAAATCAAGAACACGACCTCCG  >  CP002094/2396443‑2396633

tCAAAACACGCTCTGCTGACATTTTTAATAATTGAAATTTCTCAGGCTCTTTCGTCATCTTGATATTTTCCAAAATGACTTGTTGAGCTGCTCGGCCtt                                                                                              >  1:806870/1‑99 (MQ=255)

tCAAAACACGCTCTGCTGACATTTTTAATAATTGAAATTTCTCAGGCTCTTTCGTCATCTTGATATTTTCCAAAATGACTTGTTGAGCTGCTCGGCCtt                                                                                              >  1:1078437/1‑99 (MQ=255)

tCAAAACACGCTCTGCTGACATTTTTAATAATTGAAATTTCTCAGGCTCTTTCGTCATCTTGATATTTTCCAAAATGACTTGTTGAGCTGCTCGGCCtt                                                                                              >  1:1548838/1‑99 (MQ=255)

  aaaaCACGCTCTGCTGACATTTTTAATAATTGAAATTTCTCAGGCTCTTTCGTCATCTTGATATTTTCCAAAATGACTTGTTGAGCTGCTCGGCCtttt                                                                                            >  2:24027/1‑99 (MQ=255)

   aaaCACGCTCTGCTGACATTTTTAATAATTGAAATTTCTCAGGCTCTTTCGTCATCTTGATATTTTCCAAAATGACTTGTTGAGCTGCTCGGCCttttt                                                                                           <  2:1468419/99‑1 (MQ=255)

   aaaCACGCTCTGCTGACATTTTTAATAATTGAAATTTCTCAGGCTCTTTCGTCATCTTGATATTTTCCAAAATGACTTGTTGAGCTGCTCGGCCttttt                                                                                           <  1:1331649/99‑1 (MQ=255)

     acacGCTCTGCTGACATTTTTAATAATTGAAATTTCTCAGGCTCTTTCGTCATCTTGATATTTTCCAAAATGACTTGTTGAGCTGCTCGGCCTTTTTca                                                                                         >  2:1586144/1‑99 (MQ=255)

          ctctGCTGACATTTTTAATAATTGAAATTTCTCAGGCTCTTTCGTCATCTTGATATTTTCCAAAATGACTTGTTGAGCTGCTCGGCCTTTGTCAACaag                                                                                    >  1:1564652/1‑99 (MQ=255)

             tgctgACATTTTTAATAATTGAAATTTCTCAGGCTCTTTCGTCATCTTGATATTTTCCAAAATGACTTGTTGAGCTGCTCGGCCTTTTTCAACaagaag                                                                                 <  2:67177/99‑1 (MQ=255)

              gctgACATTTTTAATAATTGAAATTTCTCAGGCTCTTTCGTCATCTTGATATTTTCCAAAATGACTTGTTGAGCTGCTCGGCCTTTTTCAACAAGAAgg                                                                                <  2:1399662/99‑1 (MQ=255)

              gctgACATTTTTAATAATTGAAATTTCTCAGGCTCTTTCGTCATCTTGATATTTTCCAAAATGACTTGTTGAGCTGCTCGGCCTTTTTCAACAAGAAgg                                                                                >  1:1506716/1‑99 (MQ=255)

               ctgACATTTTTAATAATTGAAATTTCTCAGGCTCTTTCGTCATCTTGATATTTTCCAAAATGACTTGTTGAGCTGCTCGGCCTTTTTCAACAAGAAggg                                                                               <  2:305658/99‑1 (MQ=255)

                  aCATTTTTAATAATTGAAATTTCTCAGGCTCTTTCGTCATCTTGATATTTTCCAAAATGACTTGTTGAGCTGCTCGGCCTTTTTCAACAAGAAGGGCAt                                                                            >  2:191263/1‑99 (MQ=255)

                  aCATTTTTAATAATTGAAATTTCTCAGGCTCTTTCGTCATCTTGATATTTTCCAAAATGACTTGTTGAGCTGCTCGGCCTTTTTCAACAAGAAGGGCAt                                                                            >  1:698196/1‑99 (MQ=255)

                  aCATTTTTAATAATTGAAATTTCTCAGGCTCTTTCGTCATCTTGATATTTTCCAAAATGACTTGTTGAGCTGCTCGGCCTTTTTCAACAAGAAGGGCAt                                                                            <  1:443329/99‑1 (MQ=255)

                    aTTTTTAATAATTGAAATTTCTCAGGCTCTTTCGTCATCTTGATATTTTCCAAAATGACTTGTTGAGCTGCTCGGCCTTTTTCAACAAGAAGGGCATGa                                                                          <  2:1609083/99‑1 (MQ=255)

                     tttttAATAATTGAAATTTCTCAGGCTCTTTCGTCATCTTGATATTTTCCAAAATGACTTGTTGAGCTGCTCGGCCTTTTTCAACAAGAAGGGCATGAt                                                                         >  1:218240/1‑99 (MQ=255)

                     tttttAATAATTGAAATTTCTCAGGCTCTTTCGTCATCTTGATATTTTCCAAAATGACTTGTTGAGCTGCTCGGCCTTTTTCAACAAGAAGGGCATGAt                                                                         <  2:1281312/99‑1 (MQ=255)

                      ttttAATAATTGAAATTTCTCAGGCTCTTTCGTCATCTTGATATTTTCCAAAATGAGTTGTTGAGCTGCTCGGCCTTTTTCAACAAGAAGGGCATGATc                                                                        >  1:1549646/1‑99 (MQ=255)

                      ttttAATAATTGAAATTTCTCAGGCTCTTTCGTCATCTTGATATTTTCCAAAATGACTTGTTGAGCTGCTCGGCCTTTTTCAACAAGAAGGGCATGATc                                                                        <  2:233055/99‑1 (MQ=255)

                      ttttAATAATTGAAATTTCTCAGGCTCTTTCGTCATCTTGATATTTTCCAAAATGACTTGTTGAGCTGCTCGGCCTTTTTCAACAAGAAGGGCATGATc                                                                        <  1:210613/99‑1 (MQ=255)

                       tttAATAATTGAAATTTCTCAGGCTCTTTCGTCATCTTGATATTTTCCAAAATGACTTGTTGAGCTGCTCGGCCTTTTTCAACAAGAAGGGCATGATcc                                                                       >  1:133124/1‑99 (MQ=255)

                       tttAATAATTGAAATTTCTCAGGCTCTTTCGTCATCTTGATATTTTCCAAAATGACTTGTTGAGCTGCTCGGCCTTTTTCAACAAGAAGGGCATGATcc                                                                       <  1:1108512/99‑1 (MQ=255)

                        ttAATAATTGAAATTTCTCAGGCTCTTTCGTCATCTTGATATTTTCCAAAATGACTTGTTGAGCTGCTCGGCCTTTTTCAACAAGAAGGGCATGATCCa                                                                      <  2:1338868/99‑1 (MQ=255)

                        ttAATAATTGAAATTTCTCAGGCTCTTTCGTCATCTTGATATTTTCCAAAATGACTTCTTGAGCTGCTCGGCCTTTTTCAACAAGAAGGGCATGATCCa                                                                      <  1:133658/99‑1 (MQ=255)

                         taataaTTGAAATTTCTCAGGCTCTTTCGTCATCTTGATATTTTCCAAAATGACTTGTTGAGCTGCTCGGCCTTTTTCAACAAGAAGGGCATGATCCAt                                                                     >  2:258176/1‑99 (MQ=255)

                         taataaTGGAAATTTCTCAGGCTCTTTCGTCATCTTGATATTTTCCAAAATGACTTGTTGAGCTGCTCGGCCTTTTTCAACAAGAAGGGCATGATCCAt                                                                     <  1:183910/99‑1 (MQ=255)

                          aataatTGAAATTTCTCAGGCTCTTTCGTCATCTTGATATTTTCCAAAATGACTTGTTGAGCTGCTCGGCCTTTTTCAACAAGAAGGGCATGATCCAtt                                                                    >  1:945910/1‑99 (MQ=255)

                          aataatTGAAATTTCTCAGGCTCTTTCGTCATCTTGATATTTTCCAAAATGACTTGTTGAGCTGCTCGGCCTTTTTCAACAAGAAGGGCATGATCCAtt                                                                    <  2:1282825/99‑1 (MQ=255)

                           ataatTGAAATTTCTCAGGCTCTTTCGTCATCTTGATATTTTCCAAAATGACTTGTTGAGCTGCTCGGCCTTTTTCAACAAGAAGGGCATGATCCATTc                                                                   >  1:1107254/1‑99 (MQ=255)

                           ataatTGAAATTTCTCAGGCTCTTTCGTCATCTTGATATTTTCCAAAATGACTTGTTGAGCTGCTCGGCCTTTTTCAACAAGAAGGGCATGATCCATTc                                                                   <  2:825806/99‑1 (MQ=255)

                               ttGAAATTTCTCAGGCTCTTTCGTCATCTTGATATTTTCCAAAATGACTTGTTGAGCTGCTCGGCCTTTTTCAACAAGAAGGGCATGATCCATTCctct                                                               >  2:1377556/1‑99 (MQ=255)

                               ttGAAATTTCTCAGGCTCTTTCGTCATCTTGATATTTTCCAAAATGACTTGTTGAGCTGCTCGGCCTTTTTCAACAAGAAGGGCATGATCCATTCctct                                                               >  1:1217774/1‑99 (MQ=255)

                               ttGAAATTTCTCAGGCTCTTTCGTCATCTTGATATTTTCCAAAATGACTTGTTGAGCTGCTCGGCCTTTTTCAACAAGAAGGGCATGATCCATTCctct                                                               <  2:32155/99‑1 (MQ=255)

                                    aTTTCTCAGGCTCTTTCGTCATCTTGATATTTTCCAAAATGACTTGTTGAGCTGCTCGGCCTTTTTCAACAAGAAGGGCATGATCCATTCCTCTTgaga                                                          >  2:818139/1‑99 (MQ=255)

                                     tttCTCAGGCTCTTTCGTCATCTTGATATTTTCCAAAATGACTTGTTGAGCTGCTCGGCCTTTTTCAACAAGAAGGGCATGATCCATTCCTCTTGAGAc                                                         >  2:1463336/1‑99 (MQ=255)

                                     tttCTCAGGCTCTTTCGTCATCTTGATATTTTCCAAAATGACTTGTTGAGCTGCTCGGCCTTTTTCAACAAGAAGGGCATGATCCATTCCTCTTGAGAc                                                         >  1:85454/1‑99 (MQ=255)

                                        ctcAGGCTCTTTCGTCATCTTGATATTTTCCAAAATGACTTGTTGAGCTGCTCGGCCTTTTTCAACAAGAAGGGCATGATCCATTCCTCTTGAGACGGc                                                      <  1:1010096/99‑1 (MQ=255)

                                         tcAGGCTCTTTCGTCATCTTGATATTTTCCAAAATGACTTGTTGAGCTGCTCGGCCTTTTTCAACAAGAAGGGCATGATCCATTCCTCTTGAGACGGCt                                                     <  2:1442101/99‑1 (MQ=255)

                                            ggCTCTTTCGTCATCTTGATATTTTCCAAAATGACTTGTTGAGCTGCTCGGCCTTTTTCAACAAGAAGGGCATGATCCATTCCTCTTGAGACGGCTTCa                                                  >  2:795981/1‑99 (MQ=255)

                                            ggCTCTTTCGTCATCTTGATATTTTCCAAAATGACTTGTTGAGCTGCTCGGCCTTTTTCAACAAGAAGGGCATGATCCATTCCTCTTGAGACGGCTTCa                                                  >  2:406242/1‑99 (MQ=255)

                                            gcctctTTCGTCATCTTGATATATTCCAAACTGACTTGTTGAGCTGCTCGGCCTTTTTCAACAAGAAGGGCATGATCCATTCCTCTTGAGACGGCTTCa                                                  >  2:779251/3‑99 (MQ=255)

                                             gCTCTTTCGTCATCTTGATATTTTCCAAAATGACTTGTTGAGCTGCTCGGCCTTTTTCAACAAGAAGGGCGTGATCCATTCCTCTTGAGACGGCTTCaa                                                 <  2:680365/99‑1 (MQ=255)

                                             gCTCTTTCGTCATCTTGATATTTTCCAAAATGACTTGTTGAGCTGCTCGGCCTTTTTCAACAAGAAGGGCATGATCCATTCCTCTTGAGACGGCTTCaa                                                 >  1:527633/1‑99 (MQ=255)

                                              ctctTTCGTCATCTTGATATTTTCCAAAATGACTTGTTGAGCTGCTCGGCCTTTTTCAACAAGAAGGGCATGATCCATTCCTCTTGAGACGGCTTCAAt                                                <  1:1215761/99‑1 (MQ=255)

                                              ctctTTCGTCATCTTGATATTTTCCAAAATGACTTGTTGAGCTGCTCGGCCTTTTTCAACAAGAAGGGCATGATCCATTCCTCTTGAGACGGCTTCAAt                                                <  2:1271241/99‑1 (MQ=255)

                                                ctTTCGTCATCTTGATATTTTCCAAAATGACTTGTTGAGCTGCTCGGCCTTTTTCAACAAGAAGGGCATGATCCATTCCTCTTGAGACGGCTTCACTTg                                              >  2:436959/1‑99 (MQ=255)

                                                ctTTCGTCATCTTGATATTTTCCAAAATGACTTGTTGAGCTGCTCGGCCTTTTTCAACAAGAAGGGCATGATCCATTCCTCTTGAGACGGCTTCAATTg                                              <  1:938867/99‑1 (MQ=255)

                                                 tttCGTCATCTTGATATTTTCCAAAATGACTTGTTGAGCTGCTCGGCCTTTTTCAACAAGAAGGGCATGATCCATTCCTCTTGAGACGGCTTCAATTGc                                             >  2:248891/1‑99 (MQ=255)

                                                      tCATCTTGATATTTTCCAAAATGACTTGTTGAGCTGCTCGGCCTTTTTCAACAAGAAGGGCATGATCCATTCCTCTTGAGACGGCTTCAATTGCCAAAc                                        >  1:1462780/1‑99 (MQ=255)

                                                       cATCTTGATATTTTCCAAAATGACTTGTTGAGCTGCTCGGCCTTTTTCAACAAGAAGGGCATGATCCATTCCTCTTGAGACGGCTTCAATTGCCAAACt                                       <  1:293066/99‑1 (MQ=255)

                                                       cATCTTGATATTTTCCAAAATGACTTGTTGAGCTGCTCGGCCTTTTTCAACAAGAAGGGCATGATCCATTCCTCTTGAGACGGCTTCAATTGCCAAACt                                       >  1:1468959/1‑99 (MQ=255)

                                                        aTCTTGATATTTTCCAAAATGACTTGTTGAGCTGCTCGGCCTTTTTCAACAAGAAGGGCATGATCCATTCCTCTTGAGACGGCTTCAATTGCCAAACtt                                      >  2:230027/1‑99 (MQ=255)

                                                        aTCTTGATATTTTCCAAAATGACTTGTTGAGCTGCTCGGCCTTTTTCAACAAGAAGGGCATGATCCATTCCTCTTGAGACGGCTTCAATTGCCAAACtt                                      >  2:278507/1‑99 (MQ=255)

                                                         tCTTGATATTTTCCAAAATGACTTGTTGAGCTGCTCGGCCTTTTTCAACAAGAAGGGCATGATCCATTCCTCTTGAGACGGCTTCAATTGCCAAACTTc                                     <  1:939650/99‑1 (MQ=255)

                                                         tCTTGATATTTTCCAAAATGACTTGTTGAGCTGCTCGGCCTTTTTCAACAAGAAGGGCATGATCCATTCCTCTTGAGACGGCTTCAATTGCCAAACTTc                                     >  1:1560860/1‑99 (MQ=255)

                                                          cTTGATATTTTCCAAAATGACTTGTTGAGCTGCTCGGCCTTTTTCAACAAGAAGGGCATGATCCATTCCTCTTGAGACGGCTTCAATTGCCAAACTTcc                                    <  1:869124/99‑1 (MQ=255)

                                                           ttGATATTTTCCAAAATGACTTGTTGAGCTGCTCGGCCTTTTTCAACAAGAAGGGCATGATCCATTCCTCTTGAGACGGCTTCAATTGCCAAACTTCCt                                   >  2:285680/1‑99 (MQ=255)

                                                           ttGATATTTTCCAAAATGACTTGTTGAGCTGCTCGGCCTTTTTCAACAAGAAGGGCATGATCCATTCCTCTTGAGACGGCTTCAATTGCCAAACTTCCt                                   <  2:1229667/99‑1 (MQ=255)

                                                           ttGATATTTTCCAAAATGACTTGTTGAGCTGCTCGGCCTTTTTCAACAAGAAGGGCATGATCCATTCCTCTTGAGACGGCTTCAATTGCCAAACTTCCt                                   >  1:855039/1‑99 (MQ=255)

                                                            tGATATTTTCCAAAATGACTTGTTGAGCTGCTCGGCCTTTTTCAACAAGAAGGGCATGATCCATTCCTCTTGAGACGGCTTCAATTGCCAAACTTCCTg                                  >  2:1309467/1‑99 (MQ=255)

                                                             gATATTTTCCAAAATGACTTGTTGAGCTGCTCGGCCTTTTTCAACAAGAAGGGCATGATCCATTCCTCTTGAGACGGCTTCAATTGCCAAACTTCCTGa                                 >  2:707323/1‑99 (MQ=255)

                                                             gATATTTTCCAAAATGACTTGTTGAGCTGCTCGGCCTTTTTCAACAAGAAGGGCATGATCCATTCCTCTTGAGACGGCTTCAATTGCCAAACTTCCTGa                                 <  2:1490669/99‑1 (MQ=255)

                                                               tatTTTCCAAAATGACTTGTTGAGCTGCTCGGCCTTTTTCAACAAGAAGGGCATGATCCATTCCTCTTGAGACGGCTTCAATTGCCAAACTTCCTGAcc                               <  2:232413/99‑1 (MQ=255)

                                                               tatTTTCCAAAATGACTTGTTGAGCTGCTCGGCCTTTTTCAACAAGAAGGGCATGATCCATTCCTCTTGAGACGGCTTCAATTGCCAAACTTCCTGAcc                               >  2:1048106/1‑99 (MQ=255)

                                                                 ttttCCAAAATGACTTGTTGAGCTGCTCGGCCTTTTTCAACAAGAAGGGCATGATCCATTCCTCTTGAGACGGCTTCAATTGCCAAACTTCCTGAccca                             >  2:1120396/1‑98 (MQ=255)

                                                                 ttttCCAAAATGACTTGTTGAGCTGCTCGGCCTTTTTCAACAAGAAGGGCATGATCCATTCCTCTTGAGACGGCTTCAATTGCCAAACTTCCTGACCCt                             <  1:931197/99‑1 (MQ=255)

                                                                 ttttCCAAAATGACTTGTTGAGCTGCTCGGCCTTTTTCAACAAGAAGGGCATGATCCATTCCTCTTGAGACGGCTTCAATTGCCAAACTTCCTGACCCt                             >  2:732101/1‑99 (MQ=255)

                                                                 ttttCCAAAATGACTTGTTGAGCTGCTCGGCCTTTTTCAACAAGAAGGGCATGATCCATTCCTCTTGAGACGGCTTCAATTGCCAAACTTCCTGACCCt                             >  2:1033163/1‑99 (MQ=255)

                                                                  tttCCAAAATGACTTGTTTAGCTGCTCGGCCTTTGTCAACAAGAAGGGCATGATCCATTCCTCTTGAGACGGCTTCAATTGCCAAACTTCCTGACCCTg                            <  1:1548994/99‑1 (MQ=255)

                                                                  tttCCAAAATGACTTGTTGAGCTGCTCGGCCTTTTTCAACAAGAAGGGCATGATCCATTCCTCTTGAGACGGCTTCAATTGCCAAACTTCCTGACCCTg                            <  2:431578/99‑1 (MQ=255)

                                                                    tCCAAAATGACTTGTTGAGCTGCTCGGCCTTTTTCAACAAGAAGGGCATGATCCATTCCTCTTGAGACGGCTTCAATTGCCAAACTTCCTGACCCTGCa                          <  1:530770/99‑1 (MQ=255)

                                                                      cAAAATGACTTGTTGAGCTGCTCGGCCTTTTTCAACAAGAAGGGCATGATCCATTCCTCTTGAGACGGCTTCAATTGCCAAACTTCCTGACCCTGCaaa                        <  2:1653533/99‑1 (MQ=255)

                                                                      cAAAATGACTTGTTGAGCTGCTCGGCCTTTTTCAACAAGAAGAGAATGATCCATTCCTCTTGAGACGGCTTTAATTGCCAAGCTTCCTAACCCTGCaaa                        <  2:40289/99‑1 (MQ=255)

                                                                          aTGACTTGTTGAGCTGCTCGGCCTTTTTCAACAAGAAGGGCATGATCCATTCCTCTTGAGACGGCTTCAATTGCCAAACTTCCTGACCCTGCaaataaa                    <  2:1340419/99‑1 (MQ=255)

                                                                             aCTTGTTGAGCTGCTCGGCCTTTTTCAACAAGAAGGGCATGATCCATTCCTCTTGAGACGGCTTCAATTGCCAAACTTCCTGACCCTGCAAATAAATCa                 >  2:671386/1‑99 (MQ=255)

                                                                               ttgttgAGCTGCTCGGCCTTTTTCAACAAGAAGGGCATGATCCATTCCTCTTGAGACGGCTTCAATTGCCAAACTTCCTGACCCTGCAAATAAATCAAg               <  2:1272219/99‑1 (MQ=255)

                                                                               ttgttgAGCTGCTCGGCCTTTTTCAACAAGAAGGGCATGATCCATTCCTCTTGAGACGGCTTCAATTGCCAAACTTCCTGACCCTGCAAATAAATCAAg               >  1:479601/1‑99 (MQ=255)

                                                                               ttgttgAGCTGCTCGGCCTTTTTCAACAAGAAGGGCATGATCCATTCCTCTTGAGACGGCTTCAATTGCCAAACTTCCTGACCCTGCAAATAAATCAAg               >  1:273458/1‑99 (MQ=255)

                                                                                 gttgAGCTGCTCGGCCTTTTTCAACAAGAAGGGCATGATCCATTCCTCTTGAGACGGCTTCAATTGCCAAACTTCCTGACCCTGCAAATAAATCAAGaa             >  2:1018541/1‑99 (MQ=255)

                                                                                  ttgAGCTGCTCGGCCTTTTTCAACAAGAAGGGCATGATCCATTCCTCTTGAGACGGCTTCAATTGCCAAACTTCCTGACCCTGCAAATAAATCAAGAac            >  1:1036421/1‑99 (MQ=255)

                                                                                  ttgAGCTGCTCGGCCTTTTTCAACAAGAAGGGCATGATCCATTCCTCTTGAGACGGCTTCAATTGCCAAACTTCCTGACCCTGCAAATAAATCAAGAac            >  2:1074821/1‑99 (MQ=255)

                                                                                    gAGCTGCTCGGCCTTTTTCAACAAGAAGGGCATGATCCATTCCTCTTGAGACGGCTTCAATTGCCAAACTTCCTGACCCTGCAAATAAATCAAGAacac          >  1:502335/1‑99 (MQ=255)

                                                                                    gAGCTGCTCGGCCTTTTTCAACAAGAAGGGCATGATCCATTCCTCTTGAGACGGCTTCAATTGCCAAACTTCCTGACCCTGCAAATAAATCAAGAacac          <  2:801615/99‑1 (MQ=255)

                                                                                     aGCTGCTCGGCCTTTTTCAACAAGAAGGGCATGATCCATTCCTCTTGAGACGGCTTCAATTGCCAAACTTCCTGACCCTGCAAATAAATCAAGa              >  2:358104/1‑94 (MQ=255)

                                                                                     aGCTGCTCGGCCTTTTTCAACAAGAAGGGCATGATCCATTCCTCTTGAGACGGCTTCAATTGCCAAACTTCCTGACCCTGCAAATAAATCAAGa              <  1:358104/94‑1 (MQ=255)

                                                                                     aGCTGCTCGGCCTTTTTCAACAAGAAGGGCATGATCCATTCCTCTTGAGACGGCTTCAATTGCCAAACTTCCTGACCCTGCAAATAAATCAAGAACACg         >  1:298608/1‑99 (MQ=255)

                                                                                       ctgctCGGCCTTTTTCAACAAGAAGGGCATGATCCATTCCTCTTGAGACGGCTTCAATTGCCAAACTTCCTGACCCTGCACATAAATCAAGAACACGAc       >  2:1324965/1‑99 (MQ=255)

                                                                                        tgctCGGCCTTTTTCAACAAGAAGGGCATGATCCATTCCTCTTGAGACGGCTTCAATTGCCAAACTTCCTGACCCTGCAAATAAATCAAGAACACGAcc      <  2:670507/99‑1 (MQ=255)

                                                                                        tgctCGGCCTTTTTCAACAAGAAGGGCATGATCCATTCCTCTTGAGACGGCTTCAATTGCCAAACTTCCTGACCCTGCAAATAAATCAAGAACACAAcc      >  2:1164107/1‑99 (MQ=255)

                                                                                         gctCGGCCTTTTTCAACAAGAAGGGCATGATCCATTCCTCTTGAGACGGCTTCAATTGCCAAACTTCCTGACCCTGCAAATAAATCAAGAACACGACCt     <  2:85454/99‑1 (MQ=255)

                                                                                         gctCGGCCTTTTTCAACAAGAAGGGCATGATCCATTCCTCTTGAGACGGCTTCAATTGCCAAACTTCCTGACCCTGCAAATAAATCAAGAACACGACCt     <  2:1626870/99‑1 (MQ=255)

                                                                                          ctCGGCCTTTTTCAACAAGAAGGGCATGATCCATTCCTCTTGAGACGGCTTCAATTGCCAAACTTCCTGACCCTGCAAATAAATCAAGAACACGACCTc    <  2:554964/99‑1 (MQ=255)

                                                                                          ctCGGCCTTTTTCAACAAGAAGGGCATGATCCATTCCTCTTGAGACGGCTTCAATTGCCAAACTTCCTGACCCTGCAAATAAATCAAGAACACGACCTc    >  2:24312/1‑99 (MQ=255)

                                                                                          ctCGGCCTTTTTCAACAAGAAGGGCATGATCCATTCCTCTTGAGACGGCTTCAATTGCCAAACTTCCTGACCCTGCAAATAAATCAAGAACACGACCTc    <  2:15493/99‑1 (MQ=255)

                                                                                          ctCGGCCTTTTTCAACAAGAAGGGCATGATCCATTCCTCTTGAGACGGCTTCAATTGCCAAACTTCCTGACCCTGCAAATAAATCAAGAACACGACCTc    <  1:1262455/99‑1 (MQ=255)

                                                                                          ctCGGCCTTTTTCAACAAGAAGGGCATGATCCATTCCTCTTGAGACGGCTTCAATTGCCAAACTTCCTGACCCTGCAAATAAATCAAGAACACGACCTc    <  1:1022222/99‑1 (MQ=255)

                                                                                           tCGGCCTTTTTCAACAAGAAGGGCATGATCCATTCCTCTTGAGACGGCTTCAATTGCCAAACTTCCTGACCCTGCAAATAAATCAAGAACACGACCTcc   >  2:130971/1‑99 (MQ=255)

                                                                                           tCGGCCTTTTTCAACAAGAAGGGCATGATCCATTCCTCTTGAGACGGCTTCAATTGCCAAACTTCCTGACCCTGCAAATAAATCAAGAACACGACCTcc   <  1:252594/99‑1 (MQ=255)

                                                                                            cGGCCTTTTTCAACAAGAAGGGCATGATCCATTCCTCTTGAGACGGCTTCAATTGCCAAACTTCCTGACCCTGCAAATAAATCAAGAACACGACCTCCg  <  1:1054705/99‑1 (MQ=255)

TCAAAACACGCTCTGCTGACATTTTTAATAATTGAAATTTCTCAGGCTCTTTCGTCATCTTGATATTTTCCAAAATGACTTGTTGAGCTGCTCGGTCTTTTTCAACAAGAAGGGCATGATCCATTCCTCTTGAGACGGCTTCAATTGCCAAACTTCCTGACCCTGCAAATAAATCAAGAACACGACCTCCG  >  CP002094/2396443‑2396633

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`