BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP002094	308,336	C→G	G142R (GGT→CGT)	LLNZ_01685 ←	multidrug‑efflux transporter protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP002094	308,336	0	C	G	100.0%	411.7 / NA	103	G142R (GGT→CGT)	LLNZ_01685	multidrug‑efflux transporter protein
Reads supporting (aligned to +/- strand): ref base C (0/0); new base G (59/44); total (59/44)

Only 100 of 106 total aligned reads displayed.

GCAAGGGAGATGATTGCTCCAAAGTAGAAGGGGACTGAATTTCCAAAATGGGCTAGGAGTCCACCAACGGTT‑GGGCCAG‑AAATTGTT‑CCAACACCAACAGCAGCAGCTGTCCATCCGAATACTTTTGTTCGATTTTCTTCATCAGTAATATCGGCGAAATAAGCGAAAAGTGTCACGATATTTCCACCG  >  CP002094/308242‑308430

gCAAGGGAGATGATTGCTCCAAAGTAGAAGGGGACTGAATTTCCAAAATGGGCTAGGGCTCCACCAACGGTT‑GGGCCAG‑AAATTGTT‑CCAACACGAAca                                                                                            >  2:292733‑M2/1‑97 (MQ=255)

 cAAGGGAGATGATTGCTCCAAAGTAGAAGGGGACTGAATTTCCAAAATGGGCTAGGAGTCCACCAACGGTT‑GGGCCAG‑AAATTGTT‑CCAACACGAAcag                                                                                           <  1:550820‑M2/99‑4 (MQ=255)

    gggAGATGATTGCTCCAAAGTAGAAGGGGACTGAATTTCCAAAATGGGCTAGGAGTCCACCAACGGTT‑GGGCCAG‑AAATTGTT‑CCAACACGAAcagcag                                                                                        <  2:750308‑M2/99‑7 (MQ=255)

     ggAGATGATTGCTCCAAAGTAGAAGGGGACTGAATTTCCAAAATGGGCTAGGAGTCCACCAACGGTT‑GGGCCAG‑AAATTGTT‑CCAACACGAAcagcagc                                                                                       >  1:939222‑M2/1‑92 (MQ=255)

     ggAGATGATTGCTCCAAAGTAGAAGGGGACTGAATTTCCAAAATGGGCTAGGAGTCCACCAACGGTT‑GGGCCAG‑AAATTGTT‑CCAACACGAAcagcagc                                                                                       <  1:1344501‑M2/99‑8 (MQ=255)

      gagaTGATTGCTCCAAAGTAGAAGGGGACTGAATTTCCAAAATGGGCTAGGAGTCCACCAACGGTTGGGGCAAGAAAATTTTTCccaacacaaacaaaa                                                                                         >  1:1565064/1‑96 (MQ=255)

        gatgatTGCTCCAAAGTAGAAGGGGACTGAATTTCCAAAATGGGCTAGGAGTCCACCAACGGTT‑GGGCCAG‑AAATTGTT‑CTAACACGAAcagcagctgt                                                                                    >  1:578121‑M2/1‑89 (MQ=255)

        gatgatTGCTCCAAAGTAGAAGGGGACTGAATTTCCAAAATGGGCTAGGAGTCCACCAACGGTT‑GGGCCAG‑AAATTGTT‑CCAACACGAAcagcagctgt                                                                                    <  2:632302‑M2/99‑11 (MQ=255)

         atgatTGCTCCAAAGTAGAAGGGGACTGAATTTCCAAAATGGGCTAGGAGTCCACCAACGGTT‑GGGCCAG‑AAATTGTT‑CCAACACGAAcagcagctgtc                                                                                   >  1:387910‑M2/1‑88 (MQ=255)

          tgatTGCTCCAAAGTAGAAGGGGACTGAATTTCCAAAATGGGCTAGGAGTCCACCAACGGTT‑GGGCCAG‑AAATTGTT‑CCAACACGAAcagcagctgtcc                                                                                  <  2:817394‑M2/99‑13 (MQ=255)

          tgatTGCTCCAAAGTAGAAGGGGACTGAATTTCCAAAATGGGCTAGGAGTCCACCAACGGTT‑GGGCCAG‑AAATTGTT‑CCAACACGAAcagcagctgtcc                                                                                  <  1:903594‑M2/99‑13 (MQ=255)

          tgatTGCTCCAAAGTAGAAGGGGACTGAATTTCCAAAATGGGCTAGGAGTCCACCAACGGTT‑GGGCCAG‑AAATTGTT‑CCAACACGAAcagcagctgtcc                                                                                  <  1:1155475‑M2/99‑13 (MQ=255)

           gatTGCTCCAAAGTAGAAGGGGACTGAATTTCCAAAATGGGCTAGGAGTCCACCAACGGTT‑GGGCCAG‑AAATTGTT‑CCAACACGAAcagcagctgtcca                                                                                 >  1:1290573‑M2/1‑86 (MQ=255)

           gatTGCTCCAAAGTAGAAGGGGACTGAATTTCCAAAATGGGCTAGGAGTCCACCAACGGTT‑GGGCCAG‑AAATTGTT‑CCAACACGAAcagcagctgtcca                                                                                 >  1:908530‑M2/1‑86 (MQ=255)

            atTGCTCCAAAGTAGAAGGGGACTGAATTTCCAAAATGGGCTAGGAGTCCACCAACGGTT‑GGGCCAG‑AAATTGTT‑CCAACACGAAcagcagctgtccat                                                                                <  1:635289‑M2/99‑15 (MQ=255)

            atTGCTCCAAAGTAGAAGGGGACTGAATTTCCAAAATGGGCTAGGAGTCCACCAACGGTT‑GGGCCAG‑AAATTGTT‑CCAACACGAAcagcagctgtccat                                                                                >  1:899413‑M2/1‑85 (MQ=255)

             ttGCTCCAAAGTAGAAGGGGACTGAATTTCCAAAATGGGCTAGGAGTCCACCAACGGTT‑GGGCCAG‑AAATTGTT‑CCAACACGAAcagcagctgtccatc                                                                               >  2:1296835‑M2/1‑84 (MQ=255)

               gCTCCAAAGTAGAAGGGGACTGAATTTCCAAAATGGGCTAGGAGTCCACCAACGGTT‑GGGCCAG‑AAATTGTT‑CCAACACGAAcagcagctgtccatccg                                                                             >  2:1134684‑M2/1‑82 (MQ=255)

                cTCCAAAGTAGAAGGGGACTGAATTTCCAAAATGGGCTAGGAGTCCACCAACGGTT‑GGGCCAG‑AAATTGTT‑CCAACACGAAcagcagctgtccatccga                                                                            >  2:272612‑M2/1‑81 (MQ=255)

                     agaaagagggggCCTAATTTTCCAAAATGGGCTAGGAGTCCACCAACGGTT‑GGGCCAG‑AAATTGTT‑CCAACACGAAcagcagctgtccatccgaatact                                                                       >  1:72995‑M2/5‑76 (MQ=255)

                     aaGTAGAAGGGGACTGAATTTCCAAAATGGGCTAGGAGTCCACCAACGGTT‑GGGCCAG‑AAATTGTT‑CCAACACGAAcagcagctgtccatccgaatact                                                                       <  1:232448‑M2/99‑24 (MQ=255)

                     aaGTAGAAGGGGACTGAATTTCCAAAATGGGCTAGGAGTCCACCAACGGTT‑GGGCCAG‑AAATTGTT‑CCAACACGAAcagcagctgtccatccgaatact                                                                       <  2:1149695‑M2/99‑24 (MQ=255)

                     aaGTAGAAGGGGACTGAATTTCCAAAATGGGCTAGGAGTCCACCAACGGTT‑GGGCCAG‑AAATTGTT‑CCAACACGAAcagcagctgtccatccgaatact                                                                       >  1:792611‑M2/1‑76 (MQ=255)

                       gTAGAAGGGGACTGAATTTCCAAAATGGGCTAGGAGTCCACCAACGGTT‑GGGCCAG‑AAATTGTT‑CCAACACGAAcagcagctgtccatccgaatacttt                                                                     <  2:254317‑M2/99‑26 (MQ=255)

                       gTAGAAGGGGACTGAATTTCCAAAATGGGCTAGGAGTCCACCAACGGTT‑GGGCCAG‑AAATTGTT‑CCAACACGAAcagcagctgtccatccgaatacttt                                                                     <  2:1257329‑M2/99‑26 (MQ=255)

                         aGAAGGGGACTGAATTTCCAAAATGGGCTAGGAGTCCACCAACGGTT‑GGGCCAG‑AAATTGTT‑CCAACACGAAcagcagctgtccatccgaatacttttg                                                                   >  2:1609747‑M2/1‑72 (MQ=255)

                          gAAGGGGACTGAATTTCCAAAATGGGCTAGGAGTCCACCAACGGTT‑GGGCCAG‑AAATTGTT‑CCAACACGAAcagcagctgtccatccgaatacttttgt                                                                  <  2:1643313‑M2/99‑29 (MQ=255)

                          gAAGGGGACTGAATTTCCAAAATGGGCTAGGAGTCCACCAACGGTT‑GGGCCAG‑AAATTGTT‑CCAACACGAAcagcagctgtccatccgaatacttttgt                                                                  <  1:860313‑M2/99‑29 (MQ=255)

                           aaGGGGACTGAATTTCCAAAATGGGCTAGGAGTCCACCAACGGTT‑GGGCCAG‑AAATTGTT‑CCAACACGAAcagcagctgtccatccgaatacttttgtt                                                                 <  2:948955‑M2/99‑30 (MQ=255)

                           aaGGGGACTGAATTTCCAAAATGGGCTAGGAGTCCACCAACGGTT‑GGGCCAG‑AAATTGTT‑CCAACACGAAcagcagctgtccatccgaatacttttgtt                                                                 >  1:1590723‑M2/1‑70 (MQ=255)

                            aGGGGACTGAATTTCCAAAATGGGCTAGGAGTCCACCAACGGTT‑GGGCCAG‑AAATTGTT‑CCAACACGAAcagcagctgtccatccgaatacttttgttc                                                                <  1:638115‑M2/99‑31 (MQ=255)

                            aGGGGACTGAATTTCCAAAATGGGCTAGGAGTCCACCAACGGTT‑GGGCCAG‑AAATTGTT‑CCAACACGAAcagcagctgtccatccgaatacttttgttc                                                                <  1:1528989‑M2/99‑31 (MQ=255)

                            aGGGGACTGAATTTCCAAAATGGGCTAGGAGTCCACCAACGGTT‑GGGCCAG‑AAATTGTT‑CCAACACGAAcagcagctgtccatccgaatacttttgttc                                                                >  2:1164280‑M2/1‑69 (MQ=255)

                             ggggACTGAATTTCCAAAATGGGCTAGGAGTCCACCAACGGTT‑GGGCCAG‑AAATTGTT‑CCAACACGAAcagcagctgtccatccgaatacttttgttcg                                                               <  2:233363‑M2/99‑32 (MQ=255)

                                gACTGAATTTCCAAAATGGGCTAGGAGTCCACCAACGGTT‑GGGCCAG‑AAATTGTT‑CCAACACGAAcagcagctgtccatccgaatacttttgttcgatt                                                            >  1:721769‑M2/1‑65 (MQ=255)

                                 aCTGAATTTCCAAAATGGGCTAGGAGTCCACCAACGGTT‑GGGCCAG‑AAATTGTT‑CCAACACGAAcagcagctgtccatccgaatacttttgttcgattt                                                           >  1:1300791‑M2/1‑64 (MQ=255)

                                 aCTGAATTTCCAAAATGGGCTAGGAGGCCACCAACGGTT‑GGGCCAG‑AAATTGTT‑CCAACACGAAcagcagctgtccatccgaatacttttgttcgattt                                                           >  1:1077109‑M2/1‑64 (MQ=255)

                                    gAATTTCCAAAATGGGCTAGGAGTCCACCAACGGTT‑GGGCCAG‑AAATTGTT‑CCAACACGAAcagcagctgtccatccgaatacttttgttcgattttct                                                        >  2:371928‑M2/1‑61 (MQ=255)

                                     aaTTTCCAAAATGGGCTAGGAGTCCACCAACGGTT‑GGGCCAG‑AAATTGTT‑CCAACACGAAccgcagttgtccatccgaatacttttgttcgattttctt                                                       <  2:1221501‑M2/99‑40 (MQ=255)

                                     aaTTTCCAAAATGGGCTAGGAGTCCACCAACGGTT‑GGGCCAG‑AAATTGTT‑CCAACACGAAcagcagctgtccatccgaatacttttgttcgattttctt                                                       <  2:163671‑M2/99‑40 (MQ=255)

                                     aaTTTCCAAAATGGGCTAGGAGTCCACCAACGGTT‑GGGCCAG‑AAATTGTT‑CCAACACGAAcagcagctgtccatccgaatacttttgttcgattttctt                                                       >  2:678893‑M2/1‑60 (MQ=255)

                                     aaTTTCCAAAATGGGCTAGGAGTCCACCAACGGTT‑GGGCCAG‑AAATTGTT‑CCAACACGAAcagcagctgtccatccgaatacttttgttcgattttctt                                                       <  1:1563224‑M2/99‑40 (MQ=255)

                                     aaTTTCCAAAATGGGCTAGGAGTCCACCAACGGTG‑GGGCCAG‑AAATTGTT‑CCAACACGAAcagcagctgtccatccgagtacttttgttcgattttatt                                                       <  2:522960‑M2/99‑40 (MQ=255)

                                      aTTTCCAAAATGGGCTAGGAGTCCACCAACGGTT‑GGGCCAG‑AAATTGTT‑CCAACACGAAcagcagctgtccatccgaatacttttgttcgattttcttc                                                      <  1:643716‑M2/99‑41 (MQ=255)

                                      aTTTCCAAAATGGGCTAGGAGTCCACCAACGGTT‑GGGCCAG‑AAATTGTT‑CCAACACGAAcagcagctgtccatccgaatacttttgttcgattttcttc                                                      <  1:1413906‑M2/99‑41 (MQ=255)

                                      aTTTCCAAAATGGGCTAGGAGTCCACCAACGGTT‑GGGCCAG‑AAATTGTT‑CCAACACGAAcagcagctgtccatccgaatacttttgttcgattttcttc                                                      >  2:1542907‑M2/1‑59 (MQ=255)

                                      aTTTCCAAAATGGGCTAGGAGTCCACCAACGGTT‑GGGCCAG‑AAATTGTT‑CCAACACGAAcagcagctgtccatccgaatacttttgttcgattttcttc                                                      <  2:443137‑M2/99‑41 (MQ=255)

                                      aTTTCCAAAATGGGCTAGGAGTCCACCAACGGTT‑GGGCCAG‑AAATTGTT‑CCAACACGAAcagcagatgtccatccgaatacttttgttcgattttcttc                                                      >  1:750308‑M2/1‑59 (MQ=255)

                                       tttCCAAAATGGGCTAGGAGTCCACCAACGGTT‑GGGCCAG‑AAATTGTT‑CCAACACGAAcagcagctgtccatccgaatacttttgttcgattttcttca                                                     >  2:57073‑M2/1‑58 (MQ=255)

                                        ttCCAAAATGGGCTAGGAGTCCACCAACGGTT‑GGGCCAG‑AAATTGTT‑CCAGCACGAAcagcagctgtccatccgaatacttttgttcgattttcttcat                                                    >  1:634290‑M2/1‑57 (MQ=255)

                                        ttCCAAAATGGGCTAGGAGTCCACCAACGGTT‑GGGCCAG‑AAATTGTT‑CCAACACGAAcagcagctgtccatccgaatacttttgttcgattttcttcat                                                    >  1:242352‑M2/1‑57 (MQ=255)

                                        ttCCAAAATGGGCTAGGAGTCCACCAACGGTT‑GGGCCAG‑AAATTGTT‑CCAACACGAAcagcagctgtccatccgaatacttttgttcgattttcttcat                                                    >  1:1094819‑M2/1‑57 (MQ=255)

                                           cAAAATGGGCTAGGAGTCCCCCAACGGTT‑GGGCCAG‑AAATTGTT‑CCAACACGAAcagcagctgtccatccgaatacttttgttcgattttcttcatcag                                                 >  1:558992‑M2/1‑54 (MQ=255)

                                           cAAAATGGGCTAGGAGTCCACCAACGGTT‑GGGCCAG‑AAATTGTT‑CCAACACGAAcagcagctgtgcatccgaatacttttgttcgattttcttcatcag                                                 >  1:450931‑M2/1‑54 (MQ=255)

                                           cAAAATGGGCTAGGAGTCCACCAACGGTT‑GGGCCAG‑AAATTGTT‑CCAACACGAAcagcagctgtccatccgaatacttttgttcgattttcttcatcag                                                 >  1:1320857‑M2/1‑54 (MQ=255)

                                           cAAAATGGGCTAGGAGTCCACCAACGGTT‑GGGCCAG‑AAATTGTT‑CCAACACGAAcagcagctgtccatccgaatacttttgttcgattttcttcatcag                                                 >  2:56780‑M2/1‑54 (MQ=255)

                                           aaaaatGGGCTAGGAGTCCACCAACGGTT‑GGGCCAG‑AAATTGTT‑CCAACACGAAcagcagctgtccatccgaatccttttgttcgattttcttcatcag                                                 >  2:683802‑M2/2‑54 (MQ=255)

                                              aaTGGGCTAGGAGTCCACCAACGGTT‑GGGCCAG‑AAATTGTT‑CCAACACGAAcagcagctgtccatccgaatacttttgttcgattttcttcatcagtaa                                              >  2:1653741‑M2/1‑51 (MQ=255)

                                               aTGGGCTAGGAGTCCACCAACGGTT‑GGGCCAG‑AAATTGTT‑CCAACACGAAcagcagctgtccatccgaatacttttgttcgattttcttcatcagtaat                                             >  2:593299‑M2/1‑50 (MQ=255)

                                               aTGGGCTAGGAGTCCACCAACGGTT‑GGGCCAG‑AAATTGTT‑CCAACACGAAcagcagctgtccatccgaatacttttgttcgattttcttcatcagtaat                                             <  1:1183996‑M2/99‑50 (MQ=255)

                                               aTGGGCTAGGAGTCCACCAACGGTT‑GGGCCAG‑AAATTGTT‑CCAACACGAAcagcagctgtccatccgaatacttttgttcgattttcttcatcagtaat                                             <  2:661938‑M2/99‑50 (MQ=255)

                                                 gggCTAGGAGTCCACCAACGGTT‑GGGCCAG‑AAATTGTT‑CCAACACGAAcagcagctgtccatccgaatacttttgttcgattttcttcatcagtaatat                                           >  1:1358015‑M2/1‑48 (MQ=255)

                                                 gggCTAGGAGTCCACCAACGGTT‑GGGCCAG‑AAATTGTT‑CCAACACGAAcagcagctgtccatccgaatacttttgttcgattttcttcatcagtaatat                                           >  2:1576195‑M2/1‑48 (MQ=255)

                                                  ggCTAGGAGTCCACCAACGGTT‑GGGCCAG‑AAATTGTT‑CCAACACGAAcagcagctgtccatccgaatacttttgttcgattttcttcatcagtaatatc                                          <  2:1216436‑M2/99‑53 (MQ=255)

                                                  ggCTAGGAGTCCACCAACGGTT‑GGGCCAG‑AAATTGTT‑CCAACACGAAcagcagctgtccatccgaatacttttgttcgattttcttcatcagtaatatc                                          >  1:868682‑M2/1‑47 (MQ=255)

                                                    cTAGGAGTCCACCAACGGTT‑GGGCCAG‑AAATTGTT‑CCAACACGAAcagcagctgtccatccgaatacttttgttcgattttcttcatcagtaatatcgg                                        <  2:1187446‑M2/99‑55 (MQ=255)

                                                    cTAGGAGTCCACCAACGGTT‑GGGCCAG‑AAATTGTT‑CCAACACGAAcagcagctgtccatccgaatacttttgttcgattttcttcatcagtaatatcgg                                        >  2:364750‑M2/1‑45 (MQ=255)

                                                     tAGGAGTCCACCAACGGTT‑GGGCCAG‑AAATTGTT‑CCAACACGAAcagcagctgtccatccgaatacttttgttcgattttcttcatcagtaatatcggc                                       <  1:1010864‑M2/99‑56 (MQ=255)

                                                     tAGGAGTCCACCAACGGTT‑GGGCCAG‑AAATTGTT‑CCAACACGAAcagcagctgtccatccgaatacttttgttcgattttcttcatcagtaatatcggc                                       <  1:668769‑M2/99‑56 (MQ=255)

                                                       ggAGTCCACCAACGGTT‑GGGCCAG‑AAATTGTT‑CCAACACGAAcagcagctgtccatccgaatacttttgttcgattttcttcatcagtaatatcggcga                                     >  2:1590503‑M2/1‑42 (MQ=255)

                                                         aGTCCACCAACGGTT‑GGGCCAG‑AAATTGTT‑CCAACACGAAcagcagctgtccatccgaatacttttgttcgattttcttcatcagtaatatcggcgaaa                                   >  2:1018967‑M2/1‑40 (MQ=255)

                                                          gTCCACCAACGGTT‑GGGCCAG‑AAATTGTT‑CCAACACGAAcagccgctgtccatccgaatacttttgttcgattttcttcatcagtaatatctgtgaaat                                  <  2:25825‑M2/99‑61 (MQ=255)

                                                          gTCCACCAACGGTT‑GGGCCAG‑AAATTGTT‑CCAACACGAAcagcagctgtccatccgaatacttttgttcgattttcttcatcagtaatatcggcgaaat                                  <  2:1194617‑M2/99‑61 (MQ=255)

                                                          gTCCACCAACGGTT‑GGGCCAG‑AAATTGTT‑CCAACACGAAcagcagctgtccatccgaatacttttgttcgattttcttcatcagtaatatcggcgaaat                                  >  2:1512510‑M2/1‑39 (MQ=255)

                                                            ccaccaACGGTT‑GGGCCAG‑AAATTGTT‑CCAACACGAAcagcagctgtccatccgaatacttttgttcgattttcttcatcagtaatatcggcgaaataa                                >  2:731681‑M2/1‑37 (MQ=255)

                                                             ctccaccGGTT‑GGGCCAT‑AAATTCTT‑CCAACACGAAcagcagctgtccatccgaatacttttgttcgattttcttcatcagtaatatcggcgaaataag                               >  2:1069313‑M2/3‑36 (MQ=255)

                                                             caccaACGGTT‑GGGCCAG‑AAATTGTT‑CCAACACGAAcagcagctgtccacccgaatacttttgttcgattttcttcatcagtaatatcggcgaaataag                               >  1:529655‑M2/1‑36 (MQ=255)

                                                                  aCGGTT‑GGGCCAG‑AAATTGTT‑CCAACACGAAcagcagctgtccatccgaatacttttgttcgattttcttcatcagtaatatcggcgaaataagcgaaa                          <  1:1255676‑M2/99‑69 (MQ=255)

                                                                      tt‑GGGCCAG‑AAATTGTT‑CCAACACGAAcagcagctgtccatccgaatacttttgttcgattttcttcatcagtactatcggcgaaataagcgaaaagtg                      <  2:1019313‑M2/99‑73 (MQ=255)

                                                                       t‑GGGCCAG‑AAATTGTT‑CCAACACGAAcagcagctgtccatccgaatacttttgttcgattttcttcatcagtaatatcggcgaaataagcgaaaagtgt                     >  2:1458034‑M2/1‑26 (MQ=255)

                                                                       t‑GGGCCAG‑AAATTGTT‑CCAACACGAAcagcagctgtccatccgaatacttttgttcgattttcttcatcagtaatatcggcgaaataagcgaaaagtgt                     >  2:397006‑M2/1‑26 (MQ=255)

                                                                         gggCCAG‑AAATTGTT‑CCAACACGAAcagcagctgtccatccgaatacttttgttcgattttcttcatcagtaatatcggcgaaataagcgaaaagtgtc                    >  2:1217109‑M2/1‑25 (MQ=255)

                                                                         gggCCAG‑AAATTGTT‑CCAACACGAAcagcagctgtccatccgaatacttttgttcgattttcttcatcagtaatatcggcgaaataagcgaaaagtgtc                    >  1:233363‑M2/1‑25 (MQ=255)

                                                                         gggCCAG‑AAATTGTT‑CCAACACGAAcagcagctgtccatccgaatacttttgttcgattttcttcatcagtaatatcggcgaaataagcgaaaagagtc                    <  1:239075‑M2/99‑75 (MQ=255)

                                                                          ggCCAG‑AAATTGTT‑CCAACACGAAcagcagctgtccatccgaatacttttgttcgattttcttcatcagtgatatcggcgaaataagcgaaaagtgtca                   <  1:502796‑M2/99‑76 (MQ=255)

                                                                          ggCCAG‑AAATTGTT‑CCAACACGAAcagcagctgtccatccgaatacttttgttcgattttcttcatcagtaatatcggcgaaataagcgaaaagtgtca                   <  1:980374‑M2/99‑76 (MQ=255)

                                                                          ggCCAG‑AAATTGTT‑CCAACACGAAcagcagctgtccatccgaatacttttgttcgattttcttcatcagtaatatcggcgaaataagcgaaaagtgtca                   >  1:632302‑M2/1‑24 (MQ=255)

                                                                             cAG‑AAATTGTT‑CCAACACGAAcagcagctgtccatccgaatacttttgttcgattttcttcatcagtaatatcgg                                        >  1:703013‑M2/1‑21 (MQ=255)

                                                                             cAG‑AAATTGTT‑CCAACACGAAcagcagctgtccatccgaatacttttgttcgattttcttcatcagtaatatcgg                                        <  2:703013‑M2/75‑55 (MQ=255)

                                                                              aG‑AAATTGTT‑CCAACACGAAcagcagctgtccatccgaatacttttgttcgattttcttcatcagtaatatcggcgaaataagcgaaaagtgtcacgat               <  2:757791‑M2/99‑80 (MQ=255)

                                                                               g‑AAATTGTT‑CCAACACGAAcagcagctgtccatccgaatacttttgttcgattttcttcatcagtaatatcggcgaaataagcgaaaagtgtcacgata              <  1:254216‑M2/99‑81 (MQ=255)

                                                                               g‑AAATTGTT‑CCAACACGAAcagcagctgtccatccgaatacttttgttcgattttcttcatcagtaatatcggcgaaataagcgaaaagtgtcacgata              >  1:835347‑M2/1‑19 (MQ=255)

                                                                                 aaaTTGTT‑CCAACACGAAcagcagctgtccatccgaatacttttgttcgattttcttcatcagtaatatcggtgaaataagcgaaaagtgtcacgatat             >  1:717349‑M2/1‑18 (MQ=255)

                                                                                 aaaTTGTT‑CCAACACGAAcagcagctgtccatccgaatacttttgttcgattttcttcatcagtaatatcggcgaaataagcgaaaagtgtcacgatat             >  2:1379975‑M2/1‑18 (MQ=255)

                                                                                   aTTGTT‑CCAACACGAAcagcagctgtccatccgaatacttttgttcgattttcttcatcagtaatgtcggcgaaataagcgaaaagtgtcacgatattt           <  1:366470‑M2/99‑84 (MQ=255)

                                                                                   aTTGTT‑CCAACACGAAcagcagctgtccatccgaatacttttgttcgattttcttcatcagtaatatcggcgaaataagcgaaaagtgtcacgatattt           >  1:642184‑M2/1‑16 (MQ=255)

                                                                                      gTT‑CCAACACGAAcagcagctgtccatccgaatacttttgttcgattttcttcatcagtaatatcggcgaaataagcgaaaagtgtcacgatatttcca        >  2:1358253‑M2/1‑13 (MQ=255)

                                                                                       tt‑CCAACACGAAcagcagctgtccatccgaatacttttgttcgattttcttcatcagtaatatcggcgaaataagcgaaaagtgtcacgatatttccac       >  1:1257329‑M2/1‑12 (MQ=255)

                                                                                        t‑CCAACACGAAcagcagctgtccatccgaatacttttgttcgattttcttcatcagtaatatcggcgaaataagcgaaaagtgtcacgatatttccacc      <  2:577561‑M2/99‑89 (MQ=255)

                                                                                             acacgaacagcagctgtccatccgaatacttttgttcgattttcttcatcagtaatatcggcgaaataagcgaaaagtgtcacgatatttccaccggtt  <  1:603171‑M2/99‑93 (MQ=255)

GCAAGGGAGATGATTGCTCCAAAGTAGAAGGGGACTGAATTTCCAAAATGGGCTAGGAGTCCACCAACGGTT‑GGGCCAG‑AAATTGTT‑CCAACACCAACAGCAGCAGCTGTCCATCCGAATACTTTTGTTCGATTTTCTTCATCAGTAATATCGGCGAAATAAGCGAAAAGTGTCACGATATTTCCACCG  >  CP002094/308242‑308430

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`