Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
RA | NC_017635 | 2,322,282 | A→G | A137A (GCT→GCC) | ECW_RS11650 ← | head completion/stabilization protein |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_017635 | 2,322,282 | 0 | A | G | 100.0% | 43.7 / NA | 12 | A137A (GCT→GCC) | ECW_RS11650 | head completion/stabilization protein |
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (6/6); total (6/6) |
CACAGCTCATCAATGGTGCTGTCAATGCTGTCAGCCTTCTTGTCGCCCTTGGCACTGGCATCCACGCCGCGG > NC_017635/2322250‑2322321 | cacaGCTCATCAATGGTGCTGTCAATGCTGTCGGCCTTCTTGTCGCCCtt > 1:251278/1‑50 (MQ=255) caGCTCATCAATGGTGCTGTCAATGCTGTCGGCCTTCTTGTCGCCCTTgg < 2:1292756/50‑1 (MQ=255) atcaATGGTGCTGTCAATGCTGTCGGCCTTCTTGTCGCCCTTGGCACt < 2:409815/48‑1 (MQ=255) aTGGTGCTGTCAATGCTGTCGGCCTTCTTGTCGCCCTTGGCACTGGCATc < 1:1131468/50‑1 (MQ=255) aTGGTGCTGTCAATGCTGTCGGCCTTCTTGTCGCCCTTGGCACTGGCATc < 2:742704/50‑1 (MQ=255) ggTGCTGTCAATGCTGTCGGCCTTCTTGTCGCCCTTGGCACTGGCATCCa > 1:119798/1‑50 (MQ=255) ggTGCTGTCAATGCTGTCGGCCTTCTTGTCGCCCTTGGCACTGGCATCCa > 2:1632844/1‑50 (MQ=255) ggTGCTGTCAATGCTGTCGGCCTTCTTGTCGCCCTTGGCACTGGCATCCa > 2:606970/1‑50 (MQ=255) cTGTCAATGCTGTCGGCCTTCTTGTCGCCCTTGGCACTGGCATCCAcgcc > 1:1833800/1‑50 (MQ=255) cTGTCAATGCTGTCGGCCTTCTTGTCGCCCTTGGCACTGGCATCCAcgcc < 1:372916/50‑1 (MQ=255) tCAATGCTGTCGGCCTTCTTGTCGCCCTTGGCACTGGCATCCAcgccgc < 1:1340997/49‑1 (MQ=255) aaTGCTGTCGGCCTTCTTGTCGCCCTTGGCACTGGCATCCACGCCGCgg > 2:941494/1‑49 (MQ=255) | CACAGCTCATCAATGGTGCTGTCAATGCTGTCAGCCTTCTTGTCGCCCTTGGCACTGGCATCCACGCCGCGG > NC_017635/2322250‑2322321 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |